New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 4229386858 (15.230)21 (0.390) 13/264 3.6 2.5% noncoding (11/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_hsa_pgi = 4229405 NA (NA)noncoding (30/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 871 total aligned reads displayed.

TTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTA  >  NC_000913_3_hsa_pgi/4229238‑4229534
                                                                                                                                                    |                                                                                                                                                     
ttGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTCATATTGTGAATCCTGTAGGCCTGAt                                                                                                                                                       >  1:984250/1‑149 (MQ=255)
ttGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGGATCCTGTAGGCCTGAt                                                                                                                                                       >  1:436980/1‑149 (MQ=255)
  gAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATaa                                                                                                                                                     <  1:8375/149‑1 (MQ=255)
    aaCCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGa                                                                                                                                                   <  1:526859/149‑1 (MQ=255)
         gTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAg                                                                                                                                                    <  1:862903/143‑1 (MQ=255)
              cTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTTTAGGCCTGATAAGACGCGTCAAGc                                                                                                                                         >  1:580352/1‑149 (MQ=255)
              cTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcgcttgacgc                                                                                                                                         >  2:877183/1‑142 (MQ=255)
              cTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGGGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTTAAGc                                                                                                                                         >  2:92466/1‑149 (MQ=255)
               tACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAATGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTTAAggg                                                                                                                                        >  2:370640/1‑147 (MQ=255)
                 cATTTAGGCTTACTGGGAGATATGCAGGGCCTGAACTCGCTGTTTTGTTCGGTGGCATACAGTGTGCTGGAACAGCCGGATGAAGATGAAGTACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                      <  2:237980/149‑1 (MQ=255)
                 cATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                      <  2:981340/149‑1 (MQ=255)
                  aTTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGCCACGCGtgg                                                                                                                                     >  2:152342/1‑147 (MQ=255)
                        gCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGCGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAg                                                                                                                               >  2:555403/1‑149 (MQ=255)
                              tGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTa                                                                                                                         <  2:134556/149‑1 (MQ=255)
                               gggAGATATGCAGCTCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                                        <  2:734073/149‑1 (MQ=255)
                               gggAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                                        <  1:211988/149‑1 (MQ=255)
                                ggAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGTAACAGCCGGATGAAGATGAATGACGGGACGAGTATGAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                                       <  1:114809/149‑1 (MQ=255)
                                ggAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                                       >  2:420328/1‑149 (MQ=255)
                                   gaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                                                                                     >  2:580499/1‑148 (MQ=255)
                                     tatGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACaa                                                                                                                  <  1:132925/149‑1 (MQ=255)
                                      atGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGGAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGCCGCGTGAAGCGTCGCATCAGGCACTATTAACAAg                                                                                                                 >  2:275928/1‑149 (MQ=255)
                                        gCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGAt                                                                                                               <  1:644749/149‑1 (MQ=255)
                                              gcTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGGGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                         <  2:405421/148‑1 (MQ=255)
                                              ccTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCggg                                                                                                         >  1:944146/1‑148 (MQ=255)
                                              ccTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                         >  2:261223/1‑149 (MQ=255)
                                                   aCTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGTTGCCGGAtgcat                                                                                                    <  1:311880/149‑5 (MQ=255)
                                                      cGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                                             >  1:514112/1‑137 (MQ=255)
                                                      cGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGGT‑Caagatc                                                                                                >  1:591029/1‑144 (MQ=255)
                                                       gcagTTTTGTTCGGGGGCTTACAGTGTGCTGGAACAGCCGGATGAAGAGGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATc                                                                                               <  2:684028/146‑1 (MQ=255)
                                                         tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCg                                                                                             >  1:424180/1‑149 (MQ=255)
                                                         tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCg                                                                                             >  1:671877/1‑149 (MQ=255)
                                                         tGTTTTGCTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCg                                                                                             >  2:296049/1‑149 (MQ=255)
                                                          gTTTTGTTCGGGGGCTTACATTGTGCTGGAACACCCGGATGAAGATGAAGTGCGGGACGAGTATTAATATTGTGAGTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCgg                                                                                            <  1:331181/149‑1 (MQ=37)
                                                             ttGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCat                                                                                         <  1:470083/149‑2 (MQ=255)
                                                                 tCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCa                                                                                     <  1:547499/149‑1 (MQ=255)
                                                                 tCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCAGCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCa                                                                                     <  2:69962/149‑1 (MQ=255)
                                                                   ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACt                                                                                   >  1:728777/1‑149 (MQ=255)
                                                                   ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACt                                                                                   <  1:71381/149‑1 (MQ=255)
                                                                   ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACt                                                                                   >  1:385885/1‑149 (MQ=255)
                                                                        cTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGGGCATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTCTGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaaaa                                                                              >  2:716530/1‑149 (MQ=255)
                                                                           accgtgtGCTGGAACAGCCGGATGACGATGAAGGTCGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACg                                                                           <  1:263453/146‑1 (MQ=255)
                                                                           aCAGTGTGCTGGGACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACg                                                                           >  1:968076/1‑149 (MQ=255)
                                                                           aCAGTGTGCTGGACCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCCCCGCACCACGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACg                                                                           <  1:696542/149‑1 (MQ=255)
                                                                             aGTTTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGt                                                                         <  2:890310/149‑1 (MQ=255)
                                                                                   cTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAg                                                                   >  1:451773/1‑149 (MQ=255)
                                                                                    tGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGc                                                                  >  1:39925/1‑149 (MQ=255)
                                                                                       aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑GATGCAGCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                               >  1:276757/1‑149 (MQ=255)
                                                                                            ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                                          >  1:301110/1‑149 (MQ=255)
                                                                                                atgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                                                      >  1:368243/1‑149 (MQ=255)
                                                                                                atgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                                                      >  2:179546/1‑149 (MQ=255)
                                                                                                 tgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTCCCAGCGGAAcc                                                     <  1:616155/149‑1 (MQ=255)
                                                                                                 tgaacctgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAcc                                                     >  2:764466/7‑149 (MQ=255)
                                                                                                    agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATaa                                                                                                                                                     >  1:91904/1‑51 (MQ=255)
                                                                                                    agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAGAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGct                                                  >  1:877797/1‑149 (MQ=255)
                                                                                                     gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                                                    <  2:541680/130‑1 (MQ=255)
                                                                                                     gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGctt                                                 >  2:811735/1‑149 (MQ=255)
                                                                                                         aagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCAACCGGCAATTCACTTAAAAACGGTGAACAGCTTCCAGCGGGACGGCttcttc                                             >  2:1053/1‑149 (MQ=255)
                                                                                                          agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCa                                            <  1:102138/149‑1 (MQ=255)
                                                                                                           ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                           <  2:524915/149‑1 (MQ=255)
                                                                                                             acgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                                           >  2:674597/1‑131 (MQ=255)
                                                                                                             acgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCa                                         <  2:856235/149‑1 (MQ=255)
                                                                                                             acgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCa                                         <  1:151822/149‑1 (MQ=255)
                                                                                                               gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGc                                       <  2:345769/149‑1 (MQ=255)
                                                                                                                ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc                                      <  1:409652/149‑1 (MQ=255)
                                                                                                                 gacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGAAT‑ACCGCTACCGGCAAGTCACTTAAAAACGGTGACCAGCTTCCGCCGGAACCGCTTCTTCACCAGCCt                                     >  1:233916/1‑149 (MQ=38)
                                                                                                                    gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGc                                       >  1:849243/1‑144 (MQ=255)
                                                                                                                    gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaa                                  >  2:960761/1‑149 (MQ=255)
                                                                                                                    gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCACTTCTTCACCAGCCTTaa                                  >  2:481379/1‑149 (MQ=255)
                                                                                                                     aGTATTAATATTGTGAATCCTGTAAGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                                 <  2:117243/149‑1 (MQ=255)
                                                                                                                     aGTATGAATTTTGTGAATTCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                                 <  2:193327/149‑1 (MQ=255)
                                                                                                                      gTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCaa                                                                                         >  1:929402/1‑92 (MQ=255)
                                                                                                                       tATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAaca                               <  2:43957/149‑1 (MQ=255)
                                                                                                                        aTTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAacac                              >  1:634943/1‑149 (MQ=255)
                                                                                                                         ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAAcaca                             >  1:896223/1‑149 (MQ=255)
                                                                                                                          tAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCa                                            <  1:762219/133‑1 (MQ=255)
                                                                                                                            atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCACGCACTATGAACAAGATGCCGGAT‑CATGCCTCCGGCAATTCACTTAAAAACGCTGACCAGCTTCCAGCGGAACCCCTTCTTCACCAGCCTTAAACACATac                          >  2:913890/1‑148 (MQ=255)
                                                                                                                             tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                         >  2:599993/1‑149 (MQ=255)
                                                                                                                               ttGTGAATCCTGTAGGCCTGATCCGAACCCTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATacgcg                       >  2:618403/1‑145 (MQ=255)
                                                                                                                               ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTGGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtg                       >  1:240644/1‑149 (MQ=255)
                                                                                                                               ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACgg                                                                          >  2:838141/1‑98 (MQ=255)
                                                                                                                               ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                           >  2:657058/1‑129 (MQ=255)
                                                                                                                               ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                           <  1:657058/129‑1 (MQ=255)
                                                                                                                                tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGct                                                  <  1:831101/121‑1 (MQ=255)
                                                                                                                                  tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                                                   <  2:453782/118‑1 (MQ=255)
                                                                                                                                    aaTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACCCATAAGTGGTGtt                  >  2:318434/1‑149 (MQ=255)
                                                                                                                                    aaTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGtt                  >  1:801983/1‑149 (MQ=255)
                                                                                                                                      tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTATTCg                >  1:691027/1‑149 (MQ=255)
                                                                                                                                        cTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCggg              >  2:940468/1‑149 (MQ=255)
                                                                                                                                         tGTAGGCCTGATAAGGCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGc             <  2:223454/149‑1 (MQ=255)
                                                                                                                                         tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGAc                                                                      <  1:909164/92‑1 (MQ=255)
                                                                                                                                         tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACTAGCCTTAAACACATAAGTGGTGTTCGGGc             >  1:353805/1‑149 (MQ=255)
                                                                                                                                         tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGc             >  1:497444/1‑149 (MQ=255)
                                                                                                                                              gCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCAccc        >  2:786517/1‑149 (MQ=255)
                                                                                                                                               ccTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCa       <  1:179546/149‑1 (MQ=255)
                                                                                                                                                cTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCag      >  2:386410/1‑149 (MQ=255)
                                                                                                                                                 tGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATaa                          >  1:779475/1‑128 (MQ=255)
                                                                                                                                                 tGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagc     <  1:536124/149‑1 (MQ=255)
                                                                                                                                                   aTAAGACGCGTCAAGCGTCGCATCACGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAAGTCACTTAAAAACGCTGACCAGCTTCGCGCGGAACAGCTTCTTCACCAGCCTTAAACACATCAGTGGTGTTCGGCCCACCCagcgt   >  2:830847/1‑149 (MQ=255)
                                                                                                                                                   aTAAGACGCGTCAAGCGTCGAATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgt   <  2:507834/149‑1 (MQ=255)
                                                                                                                                                    tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgta  <  2:636349/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTA  >  NC_000913_3_hsa_pgi/4229238‑4229534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.