New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 4236244 =834 (14.800)38 (0.730) 19/258 2.2 4.7% intergenic (+68/‑46) yjbE/yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
?NC_000913_3_hsa_pgi 4236268 = 756 (14.460)intergenic (+92/‑22) yjbE/yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 938 total aligned reads displayed.

GGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGATGATG  >  NC_000913_3_hsa_pgi/4236120‑4236416
                                                                                                                                                    |                                                                                                                                                    
   ggTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGGAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGGTTAACCATAACCACACTCCGGTGTGGTTCTTCTg                                                                                                                                                   >  1:710202/1‑149 (MQ=255)
    gggATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGc                                                                                                                                                  <  2:84192/147‑1 (MQ=255)
    gTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGCATTAACCACCACCACCCCCCGGTGCGGCTACTCTGc                                                                                                                                                  <  2:987504/149‑1 (MQ=255)
      gATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGAAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCGAGAAGTATGAAGGGCTTAACCATAACCACACTCACGTGTGGTTATTCTGccc                                                                                                                                                >  2:7682/1‑149 (MQ=255)
         ggTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAGAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCctc                                                                                                                                             >  2:747701/1‑149 (MQ=255)
         ggTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCctc                                                                                                                                             >  1:767283/1‑149 (MQ=255)
             cTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                                                                                         <  1:935104/149‑1 (MQ=255)
             cTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                                                                                         <  1:56593/149‑1 (MQ=255)
              tAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTACGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGCTTAACCATCCCCACACACCGGTGTGGTTCTTCTGCCCCTCTggct                                                                                                                                        >  2:313436/1‑147 (MQ=255)
               aaTACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGGGTGGTTATTCTCCCCCTCTGgata                                                                                                                                       >  2:610514/1‑147 (MQ=255)
                tcccacagttaagtgttcagctctgtagtcgtgtctgaacaggcgtgtaataacaggcagataagaatgagtgcaggtcgcttctctactcttctccagaggtgcagaATAACCCCACTCCGGTGTGGTTATTCTGCCCCTCTGGagaa                                                                                                                                      >  2:165388‑M1/109‑149 (MQ=255)
                  aCCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGagaaga                                                                                                                                    <  2:804421/149‑1 (MQ=255)
                    cGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGCAGAGt                                                                                                                                  >  1:473383/1‑149 (MQ=255)
                    cGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGt                                                                                                                                  >  1:516646/1‑149 (MQ=255)
                      ggACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCg                                                                                                                                <  2:689775/149‑1 (MQ=255)
                        accaccACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTg                                                                                                                              <  1:854515/149‑1 (MQ=255)
                          caccacAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGaa                                                                                                                            >  2:544560/1‑149 (MQ=255)
                          caccacAACCACGACCACCAGCACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGaa                                                                                                                            <  1:698958/149‑1 (MQ=255)
                            ccacAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACCATCCGGTGTGGGTATTCTGCCTCTCTGAAGAAGCGTCGTGaacc                                                                                                                          >  2:511988/1‑147 (MQ=255)
                            ccacAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGc                                                                                                                          >  2:665888/1‑149 (MQ=255)
                            ccacAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGc                                                                                                                          >  1:88039/1‑149 (MQ=255)
                              acaACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAGGCGa                                                                                                                        >  2:866298/1‑149 (MQ=255)
                                aaCCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGAcc                                                                                                                      >  1:81306/1‑149 (MQ=255)
                                 aCCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCGTTGCATCCGTGGCTAGAAGTATGAAGGGATTAACCGTAACCACACTCCGTTGTGGTTATTCTGCCCCTCTGGCGAGGAGTCGTGAAGCGAccg                                                                                                                     >  2:47331/1‑148 (MQ=255)
                                 aCCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGAc                                                                                                                       >  1:547869/1‑147 (MQ=255)
                                   cACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCTGTGTGGTTATTTTGCCCCTCTGGAGAAGAGTCGTGAATCGACCTGc                                                                                                                   >  1:837210/1‑149 (MQ=255)
                                   cACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGc                                                                                                                   >  1:166874/1‑149 (MQ=255)
                                    aCGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCa                                                                                                                  >  2:573797/1‑149 (MQ=255)
                                      gACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACt                                                                                                                >  2:786699/1‑149 (MQ=255)
                                         caccaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAt                                                                                                             >  1:725988/1‑149 (MQ=255)
                                          accaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAtt                                                                                                            >  2:643958/1‑149 (MQ=255)
                                          accaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAtt                                                                                                            >  2:421785/1‑149 (MQ=255)
                                            caGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                                                                                         >  2:192863/1‑118 (MQ=255)
                                              gTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTa                                                                                                        >  1:800988/1‑149 (MQ=255)
                                                   cAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGc                                                                                                   <  1:624065/149‑1 (MQ=255)
                                                     ggtataaAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATTAAGGCAATAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCt                                                                                                 <  1:190326/146‑1 (MQ=255)
                                                      taataaAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGagaag                                                                                                                                     >  2:291952/1‑112 (MQ=255)
                                                       aataaAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGc                                                                                                                          >  2:254876/1‑122 (MQ=255)
                                                         atagttatttatCACCAAAATATCTCGATTCATTGCATCTGTGGCTAGAAGTATGAAGGGATCAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCCTGAAGCGACCTGCACTCATTCTTCTCTGCCTGtta                                                                                             <  2:127700/144‑1 (MQ=255)
                                                           aaGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatt                                                                                           <  1:46464/149‑1 (MQ=255)
                                                            ctgtaataacaggcagataagaatgagtgcaggtcgcttcacgactcttctccagaggggcagaATAACCACACTCCGGTGTGGTTATTc                                                                                                                                                     >  1:642907‑M1/65‑90 (MQ=255)
                                                            aGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAGGAGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCGGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                                                                                          <  1:977273/149‑1 (MQ=255)
                                                             gtatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTAc                                                                                         >  1:922425/1‑149 (MQ=255)
                                                              tatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACa                                                                                        <  1:786716/149‑1 (MQ=255)
                                                                tgtagCCCCAAAATAATTCGAGTCATTGGATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAgg                                                                                      <  2:360739/149‑1 (MQ=255)
                                                                      cccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt                                                                                >  2:888429/1‑149 (MQ=255)
                                                                       ccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGGGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTc                                                                               >  1:96135/1‑149 (MQ=255)
                                                                        cAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCa                                                                              <  1:607675/149‑1 (MQ=255)
                                                                         aaaaTAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAg                                                                             >  1:658459/1‑149 (MQ=255)
                                                                         aaaaTAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAg                                                                             >  2:708354/1‑149 (MQ=255)
                                                                              aatTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTCCAGGCCTGTTCAGCCACg                                                                        >  1:243626/1‑149 (MQ=255)
                                                                                ttCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGt                                                                                                                               >  1:592318/1‑92 (MQ=255)
                                                                                 tCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTCTTACAGGCCTGTTCAGCCACCACt                                                                     >  2:403070/1‑149 (MQ=255)
                                                                                    aGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTaaa                                                                  <  1:283723/149‑1 (MQ=255)
                                                                                     gTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCCTCCCCGACTAAag                                                                 >  2:929649/1‑149 (MQ=255)
                                                                                     gTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAag                                                                 >  1:684717/1‑149 (MQ=255)
                                                                                      tCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAaga                                                                >  2:823819/1‑149 (MQ=255)
                                                                                       cATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAagag                                                               <  1:123527/149‑1 (MQ=255)
                                                                                        aTTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTATGGAGAAGAGTCGTGAAGGGACCTGCACTCATTCTTATCTGCATGTTATTAAAGGCCTCTTCAGCTACGCCTAAAGAGc                                                              >  2:242598/1‑149 (MQ=255)
                                                                                          tgactCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCtc                                                            <  2:267395/145‑2 (MQ=255)
                                                                                          tGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTg                                                            <  2:347378/149‑1 (MQ=255)
                                                                                           gCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTgg                                                           <  1:492112/149‑1 (MQ=255)
                                                                                           gCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCCGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTgg                                                           <  2:387847/149‑1 (MQ=255)
                                                                                            cATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGCGCTggc                                                          >  2:880567/1‑148 (MQ=255)
                                                                                            cATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTggg                                                          >  1:530366/1‑149 (MQ=255)
                                                                                             aTCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGc                                                         >  1:749802/1‑149 (MQ=255)
                                                                                                tgtgGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAAt                                                      >  1:89096/1‑149 (MQ=255)
                                                                                                 gtgGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAAtt                                                     <  1:321626/149‑1 (MQ=255)
                                                                                                        gAAGTATGAAGGGATTAACCATAACCATGCTCCGGTGTGGTTATTCTGTCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACtgtg                                              <  2:598660/149‑1 (MQ=255)
                                                                                                          aGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTggg                                            <  2:63003/149‑1 (MQ=255)
                                                                                                           gTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTAt                                                                                                       <  1:34973/89‑1 (MQ=255)
                                                                                                           gTATGAAGGGATTAACCATAACCACACTACGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTAt                                                                                                       <  1:33694/89‑1 (MQ=255)
                                                                                                             aTGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCCCTGTGGGACa                                         >  2:489456/1‑149 (MQ=255)
                                                                                                               gAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTa                                                                    <  2:729837/120‑1 (MQ=255)
                                                                                                                aaGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTc                                      >  1:103674/1‑149 (MQ=255)
                                                                                                                 aGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTAGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGATGGGCAATTAACTGTGGGACAGTCt                                     >  1:901796/1‑149 (MQ=255)
                                                                                                                    gATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGtt                                  <  2:757752/149‑1 (MQ=255)
                                                                                                                      ttAACCATATCGGCACTCAGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCg                                >  2:967310/1‑149 (MQ=255)
                                                                                                                      ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                                                                                          <  1:149444/91‑1 (MQ=255)
                                                                                                                      ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                                                                                          >  2:149444/1‑91 (MQ=255)
                                                                                                                         agaataaccacaccggagtgtggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCa                             >  2:657126‑M2/28‑149 (MQ=255)
                                                                                                                         agaataaccacaccggagtgtggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCa                             >  1:227220‑M2/28‑149 (MQ=255)
                                                                                                                          ccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGagaa                                                                                                                                      >  2:895509/1‑43 (MQ=255)
                                                                                                                          ccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCAc                            >  1:417641/1‑149 (MQ=255)
                                                                                                                            agAACCACGGTCCGGGGTGGTTATTCTGCCCCGCTGGAGAAGAGTCGGGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGAGCAATGCACTGTGGGACAGTCTGTTCGGCACGc                          >  2:217609‑M1/3‑149 (MQ=255)
                                                                                                                              aaccacaccggagtgtggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGCAACTCTGTTCGGCACgccc                        >  2:444751‑M2/23‑148 (MQ=255)
                                                                                                                               accacaccggagtgtggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGCTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAg                       >  1:430238‑M2/22‑149 (MQ=255)
                                                                                                                                CCACACCCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCacgccggg                      <  1:395663‑M1/149‑4 (MQ=255)
                                                                                                                                 CACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGc                     >  1:293340‑M1/1‑149 (MQ=255)
                                                                                                                                     CTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTa                                                                    >  1:208469‑M1/1‑98 (MQ=255)
                                                                                                                                      tCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACa                >  1:667140/1‑149 (MQ=255)
                                                                                                                                        cGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGc              <  2:32187/149‑1 (MQ=255)
                                                                                                                                           tgtggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGa           >  2:203800‑M2/10‑149 (MQ=255)
                                                                                                                                             tggttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTaaa                                                                  <  2:279334‑M2/85‑1 (MQ=255)
                                                                                                                                               gttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGc                     <  2:556043‑M2/130‑1 (MQ=255)
                                                                                                                                               gttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACa                <  1:260649‑M2/135‑1 (MQ=255)
                                                                                                                                                ttatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGgat      <  1:990298‑M2/145‑1 (MQ=255)
                                                                                                                                                 tatTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTaa                                                                   <  1:315214‑M2/84‑1 (MQ=255)
                                                                                                                                                  atTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGgatga    >  2:911781‑M2/3‑149 (MQ=255)
                                                                                                                                                    tCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGgatgatg  <  2:530366/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGATGATG  >  NC_000913_3_hsa_pgi/4236120‑4236416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.