New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 4245161 =NA (NA)17 (0.320) 12/264 3.9 1.8% noncoding (42/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913_3_hsa_pgi 4245193 = 932 (17.420)noncoding (74/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 997 total aligned reads displayed.

GCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGC  >  NC_000913_3_hsa_pgi/4245046‑4245341
                                                                                                                                                   |                                                                                                                                                    
    tGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGTACGGATAAGGCTTTCACGCCTTATCCGAAAACAACTCCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAt                                                                                                                                                 >  2:900988/1‑149 (MQ=255)
      aCCATTTCAGCGTGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATAc                                                                                                                                               <  1:480440/149‑1 (MQ=255)
        cATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTACCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGt                                                                                                                                             >  2:632032/1‑149 (MQ=255)
          tttCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGttt                                                                                                                                           >  2:853213/1‑149 (MQ=255)
           ttCAGGGGGTCGCTTTGCCACCTATGTTTCGTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTc                                                                                                                                          <  1:350059/149‑1 (MQ=255)
                 gcgTCGCTTTGCCACCAAGGTTTCTTTTTAATGACAGCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGtttt                                                                                                                                    <  2:589342/149‑1 (MQ=255)
                   gTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACACGTCTTATCAGGCCTACACACGTTTCGGTTTTGt                                                                                                                                  >  2:290169/1‑149 (MQ=255)
                    tCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTa                                                                                                                                 >  2:985445/1‑149 (MQ=255)
                    tCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTa                                                                                                                                 <  2:736827/149‑1 (MQ=255)
                     cGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAg                                                                                                                                <  1:798189/149‑1 (MQ=255)
                              accaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATCCGTTTCGGTTTTGTAGGCCGGACaa                                                                                                                       >  1:457554/1‑149 (MQ=255)
                               ccaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                                                                      <  1:909012/149‑1 (MQ=255)
                                 aaTGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGCCGCGTCCTATCCGCCATCCACACGTTTTGGTTTTGTAGGCCGGACAAGGc                                                                                                                    >  1:134623/1‑149 (MQ=255)
                                  aTGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCg                                                                                                                   <  1:868462/149‑1 (MQ=255)
                                    gTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCGTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                                                                 <  1:888989/149‑1 (MQ=255)
                                     tttCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTc                                                                                                                >  1:834164/1‑149 (MQ=255)
                                     tttCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTc                                                                                                                >  1:651048/1‑149 (MQ=255)
                                       tCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGCCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAc                                                                                                              >  2:837933/1‑149 (MQ=255)
                                               aTGGCATCCAGGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTAGCCGACAACAACTGCCTGATGCGACGCTTACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATc                                                                                                      <  1:707929/149‑1 (MQ=255)
                                                 gACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAgg                                                                                                                     <  2:535278/132‑1 (MQ=255)
                                                 gACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgcc                                                                                                           >  1:329527/1‑142 (MQ=255)
                                                  aCATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCgg                                                                                                   <  2:107659/149‑1 (MQ=255)
                                                    aTCCATGGGGTTCTTCCTCATTCCAGGACGGAAAGCGCATTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCa                                                                                                 >  1:986866/1‑149 (MQ=255)
                                                      ccATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAtt                                                                                               >  2:335966/1‑149 (MQ=255)
                                                        aTGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCgg                                                                                                   <  1:558986/143‑1 (MQ=255)
                                                        aTGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTc                                                                                             >  1:208879/1‑149 (MQ=255)
                                                         tGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTca                                                                                            <  2:558228/149‑1 (MQ=255)
                                                           gggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCgg                                                                                                                           >  2:200790/1‑116 (MQ=255)
                                                            ggTTCTTCCGCATCCGAGGACGGATAAGGCTTTCACTCCTTATCCTACAACAACTGCCTGATGCGACGCTGACTCGTCTTATCAGGCCTACATCCGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAg                                                                                         <  2:228747/149‑1 (MQ=37)
                                                             gTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATCCGTTTCGGTTTTGTAGGCCGGACAAGGCGTTAACGCCGCATCCGGCATTTGACAGc                                                                                        >  1:928711/1‑149 (MQ=255)
                                                              ttcttcCTCATTCCAGAACGGATAACGCTTTCCCGCCTAATCCGCCCACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCa                                                                                       <  1:229879/149‑1 (MQ=37)
                                                                   ccTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTCGGCCGGACAAGGCGTTCACACCGCATCCGGCATTTCACAGCATTACt                                                                                  >  1:952738/1‑149 (MQ=255)
                                                                    cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACtt                                                                                 >  1:687023/1‑149 (MQ=255)
                                                                      cATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTgg                                                                               <  1:173380/149‑1 (MQ=255)
                                                                      cATTCCAGGACGGATAAGGCTTTCACGCCTTATACGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACCAGGGATATTCGCCGCATCCGGCATTTCACAGCATTACTTgg                                                                               <  1:494455/149‑1 (MQ=37)
                                                                       aTTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAATATCTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGt                                                                              <  1:777593/149‑1 (MQ=255)
                                                                       aTTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTGTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGt                                                                              >  1:391811/1‑149 (MQ=255)
                                                                              gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGa                                                                       >  1:758581/1‑149 (MQ=255)
                                                                                 ggATAAGGCTTTCACGCCTTATCCGACAGCCACCCCCTAATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTGCTTGGTGATACGAGTc                                                                    >  2:720079/1‑149 (MQ=37)
                                                                                 ggATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTc                                                                    >  1:521632/1‑149 (MQ=255)
                                                                                   aTAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTg                                                                  >  2:670207/1‑149 (MQ=255)
                                                                                      aGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTgcgc                                                               <  2:748244/149‑1 (MQ=255)
                                                                                        gCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCCTTTCACAGCATTACTTGGTGGTACGCGTCTGCGCGt                                                             >  1:535152/1‑149 (MQ=255)
                                                                                        gCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTgcgc                                                               >  1:376290/1‑147 (MQ=255)
                                                                                        gCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGt                                                             >  2:877553/1‑149 (MQ=255)
                                                                                        gCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGt                                                             >  2:492012/1‑149 (MQ=255)
                                                                                        gCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGt                                                             >  1:573048/1‑149 (MQ=255)
                                                                                              aCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAg                                                                                                                                >  1:301258/1‑76 (MQ=255)
                                                                                                gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                                                     >  1:898545/1‑149 (MQ=255)
                                                                                                gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                                                     <  2:468758/149‑1 (MQ=255)
                                                                                                gCCTTACCCGACAACACCCGCCTGTGGCGACGCTGACGTGTCTTATCAGCCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCATTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                                                     <  2:782995/149‑1 (MQ=38)
                                                                                                 ccTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTTTATGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATCCGAGTCTGCGCGTCTTTCAgga                                                    >  2:614855/1‑148 (MQ=255)
                                                                                                  cTTATCCGACAACAACTGCCTGATGCGCCGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGc                                                   >  1:198751/1‑149 (MQ=255)
                                                                                                  cTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                                                                                <  2:307477/120‑1 (MQ=255)
                                                                                                  cTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGc                                                   >  1:672027/1‑149 (MQ=255)
                                                                                                   ttATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCt                                                  <  2:1531/149‑1 (MQ=255)
                                                                                                     aTCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACAAGTCTGCCCGGCTTTCAGGGCttt                                                >  1:431296/1‑148 (MQ=255)
                                                                                                      tCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCa                                               <  1:967815/149‑1 (MQ=255)
                                                                                                       ccGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCAt                                              <  2:376570/149‑1 (MQ=255)
                                                                                                       ccGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCAt                                              >  1:722620/1‑149 (MQ=255)
                                                                                                        cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATc                                             >  2:800735/1‑149 (MQ=255)
                                                                                                         gACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCttt                                                         <  1:746832/136‑1 (MQ=255)
                                                                                                         gACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCg                                            >  1:410406/1‑149 (MQ=255)
                                                                                                         gACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCg                                            >  2:58044/1‑149 (MQ=255)
                                                                                                         gACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAAATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCg                                            >  1:61230/1‑149 (MQ=255)
                                                                                                          acaacaACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGt                                                                              <  2:923454/114‑1 (MQ=255)
                                                                                                           aaacaatTGCCTGCAGGGAGGCGTACGCGTCTTATCAGGCCTAGATACGTTTCGGTTGTGTAGGACGGACAAGGCGTGGACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATGCGAGTCTGCGCGGCTTGCAGGGCTTCATCgcc                                          <  2:411481/148‑3 (MQ=255)
                                                                                                            aacaacTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAgg                                                                                                                               >  2:35120/1‑63 (MQ=255)
                                                                                                            aacaacTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACt                                                                                  >  2:514305/1‑108 (MQ=255)
                                                                                                            aacaacTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACa                                         >  2:65181/1‑149 (MQ=255)
                                                                                                            aacaacTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACa                                         <  1:184386/149‑1 (MQ=255)
                                                                                                               aacTGCCTGATGCGACGCTGCCGCGTCTGATCAGGCCTACATACGCTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGACTCTGCGCGTCTTTCAGCGCTTCATCGACAgcc                                      >  2:170809/1‑147 (MQ=38)
                                                                                                                  tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTga                                   >  1:250812/1‑149 (MQ=255)
                                                                                                                   gCCTGATGCCACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTgac                                  <  2:270117/149‑1 (MQ=255)
                                                                                                                    ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCttt                                                         <  2:889384/125‑1 (MQ=255)
                                                                                                                     cTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTgacga                                >  2:823665/1‑149 (MQ=255)
                                                                                                                            gACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTgg                         >  2:965805/1‑149 (MQ=255)
                                                                                                                              cGCTGACGTGTCTTATCAGGGCTACATACGTTTCTGTTTTGTAGGCCGGTCATGGCGTTCACGCTGCATCCGGCATCTTACAGTATTACTTCGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACACTCTGCCTATCGCTggcg                       <  2:437650/149‑1 (MQ=255)
                                                                                                                                 tGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGCCTGACGACCGCTGgcggcg                    >  2:324735/1‑149 (MQ=255)
                                                                                                                                   aCGCGTCTTATTAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGtt                  <  1:157341/149‑1 (MQ=255)
                                                                                                                                     gcgTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGa                <  2:116929/149‑1 (MQ=255)
                                                                                                                                     gcgTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGa                >  2:761644/1‑149 (MQ=255)
                                                                                                                                     gcgTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGa                <  1:509395/149‑1 (MQ=255)
                                                                                                                                      cgTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGAATCCGGCACTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGAt               <  1:979687/149‑1 (MQ=255)
                                                                                                                                       gTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTgg                                                                               <  1:852754/84‑1 (MQ=255)
                                                                                                                                       gTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGGCGACCGCTGGCGGCGTTGATc              >  1:275824/1‑149 (MQ=255)
                                                                                                                                       gTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATGACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATc              <  2:94129/149‑1 (MQ=255)
                                                                                                                                         cgtagcAGGCCTACAGACGTTTCGGTCTTGTAGGTCGGACAAGTCGTTCACGCTGTATCCGGCATTTCACAGCATTACTTGGTGATACCAGTCTGCGCGTCTTTCAGGGCTTCATCGTCAGTCTGACGACCGCTGGCGGCGTTGATCAc            <  1:102167/144‑1 (MQ=255)
                                                                                                                                         cTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCAc            >  2:24732/1‑149 (MQ=255)
                                                                                                                                          ttATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGCCAGCCTGCCGACCGCTGGCGGCGTTGATcccc           >  1:822251/1‑149 (MQ=255)
                                                                                                                                          ttATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGTCCGCTGGCGGCGTTGATCAcc           <  2:687023/149‑1 (MQ=255)
                                                                                                                                          ttATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCAcc           <  2:393105/149‑1 (MQ=255)
                                                                                                                                          ttATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCAcc           <  2:183353/149‑1 (MQ=255)
                                                                                                                                           tATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCg          <  2:2100/149‑1 (MQ=255)
                                                                                                                                             tCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCa        >  1:116911/1‑149 (MQ=255)
                                                                                                                                               aGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGAt                                                                           >  2:704498/1‑80 (MQ=255)
                                                                                                                                               aGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCCGt      >  1:316009/1‑149 (MQ=255)
                                                                                                                                                 gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTgac                                  <  1:621919/119‑1 (MQ=255)
                                                                                                                                                 gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTAc    >  2:13553/1‑149 (MQ=255)
                                                                                                                                                  ccTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTga                                   >  1:588335/1‑117 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGACGACCGCTGGCGGCGTTGATCACCGCAGTACGC  >  NC_000913_3_hsa_pgi/4245046‑4245341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.