New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 42293861137 (16.930)25 (0.390) 16/266 3.8 4.1% noncoding (11/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_hsa_pgi 4614643 = 91 (1.430)noncoding (359/388 nt) REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1150 total aligned reads displayed.

ATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAG  >  NC_000913_3_hsa_pgi/4229237‑4229535
                                                                                                                                                      |                                                                                                                                                     
aTTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑At                                                                                                                                                       <  1:764558/150‑1 (MQ=255)
  tGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGTACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATaa                                                                                                                                                     <  2:1133622/150‑1 (MQ=255)
      aCCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGAcg                                                                                                                                                 >  1:715943/1‑150 (MQ=255)
        cAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGAATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGAcgcg                                                                                                                                               >  1:55220/1‑150 (MQ=255)
           ttCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCa                                                                                                                                            >  1:1107021/1‑150 (MQ=255)
                tACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGt                                                                                                                                       >  1:20164/1‑150 (MQ=255)
                 ttctttAGGATTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTc                                                                                                                                      <  2:593879/147‑1 (MQ=255)
                 aCATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGCATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTc                                                                                                                                      <  2:537514/150‑1 (MQ=255)
                  cATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCg                                                                                                                                     >  1:155592/1‑150 (MQ=255)
                       aGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCa                                                                                                                                <  1:339115/150‑1 (MQ=255)
                        ggCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAg                                                                                                                               >  1:66481/1‑150 (MQ=255)
                         gCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACTAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAgg                                                                                                                              <  2:572861/150‑1 (MQ=255)
                           ttACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                                                                            >  1:748892/1‑150 (MQ=255)
                                gggAGATATGCAGCGCCTGAACTCGCTGTTTGGTTCGGTGGCTTACGTGGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                                       <  1:329771/150‑1 (MQ=255)
                                  gagaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                                                                                     <  2:71396/150‑1 (MQ=255)
                                         gCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATc                                                                                                                                 >  1:467033/1‑131 (MQ=255)
                                          cAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGCCAAGCGTCGCATAAGGCACTATGAACAAGATGc                                                                                                             >  1:262848/1‑150 (MQ=255)
                                              gcCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGTCACTATGAACAAGATGCCGGa                                                                                                         <  2:1043834/150‑1 (MQ=255)
                                               ccTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGGTGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAt                                                                                                        >  1:532708/1‑150 (MQ=255)
                                               ccTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAt                                                                                                        <  1:562684/150‑1 (MQ=255)
                                                cTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTc                                                                                                                                      <  2:634071/119‑1 (MQ=255)
                                                 tGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATc                                                                                                                                 <  1:484571/123‑1 (MQ=255)
                                                  gAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGACGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATGCGACGCTTGACGCGTCTTATCAGGc                                                                                                                             >  1:609975/1‑126 (MQ=37)
                                                   aaCTCGCTGTTTTGTTCGGTGGCTTAGAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATg                                                                                                    <  2:922303/150‑1 (MQ=255)
                                                     cTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAACGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCa                                                                                                  >  2:276899/1‑150 (MQ=255)
                                                      gcGCTGTGTTGTTCGGGGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCAt                                                                                                 <  2:649678/149‑1 (MQ=255)
                                                         cTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCg                                                                                              >  1:108790/1‑150 (MQ=255)
                                                          tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCgg                                                                                             >  1:508570/1‑150 (MQ=255)
                                                           gTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                                                                            >  2:796282/1‑150 (MQ=255)
                                                                 ttCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCTGCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCa                                                                                      <  1:876858/150‑1 (MQ=255)
                                                                 ttCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCa                                                                                      >  1:1044171/1‑150 (MQ=255)
                                                                  tCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                                                                                     <  2:223693/150‑1 (MQ=255)
                                                                    ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACtt                                                                                   <  1:976634/150‑1 (MQ=255)
                                                                         cTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCaa                                                                                                                                           >  2:173688/1‑89 (MQ=255)
                                                                          ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAAc                                                                             <  1:224815/150‑1 (MQ=255)
                                                                          ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAAc                                                                             >  2:613001/1‑150 (MQ=255)
                                                                          ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTAGGAACAAGATGCCGAATCGTGCATCCGGGAGTGCACTTGAAAAc                                                                             >  1:842801/1‑150 (MQ=38)
                                                                             cAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                                                                          <  2:668082/150‑1 (MQ=255)
                                                                             cAGTGTGCTGAAACAGCCGGATGAAGATGAAGTACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                                                                          <  1:1139802/150‑1 (MQ=255)
                                                                                tgtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAc                                                                       >  2:1166052/1‑150 (MQ=255)
                                                                                  tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                                                     >  1:913804/1‑150 (MQ=255)
                                                                                  gggtGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGACCAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                                                     <  2:460659/147‑1 (MQ=255)
                                                                                      ggAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACaa                                                                                                                  >  1:937629/1‑101 (MQ=255)
                                                                                      ggAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGCGAcaacgag                                                                 >  2:890820/1‑144 (MQ=255)
                                                                                       gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                                <  1:243369/150‑1 (MQ=255)
                                                                                       gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCAGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                                >  2:843439/1‑150 (MQ=255)
                                                                                       gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCAGCCGGCAGTTCACTTAAAAACGATCACCAGCTTc                                                                >  1:579412/1‑150 (MQ=255)
                                                                                               ggATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGaa                                                        >  1:786959/1‑150 (MQ=255)
                                                                                                gatgaggaagaaGGACGGGATGAGTATTCATATGAGGATTCCTGATGTGCTC‑ATAGGACGCGTCAAGCGTCGCATCAGGCACTATGAAGAAGATTACGGATCATGAATCCGGCAATTAACGTACTAACGGTGACCAGCTTCCAGCGGAAc                                                       <  2:1058935/150‑1 (MQ=255)
                                                                                                    aagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGct                                                   <  1:445228/150‑1 (MQ=255)
                                                                                                     agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCAt                                                                                                                                  >  2:487214/1‑70 (MQ=255)
                                                                                                      gatgtagGACGGGACGAGTATGAATATTGTGAATCAGGTA‑GCCTGTACAAGATGCGTCAAGCGGCGCATCAGTCACTATGAACAAGATGCCGGCTCATGCATACTGCAATTCACTTAAAAACGGTGACCAGCTTCCAGTGGAACCGcttc                                                 <  2:342028/150‑1 (MQ=255)
                                                                                                      gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGTCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                                                 >  1:79861/1‑150 (MQ=255)
                                                                                                      gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                                                 >  1:1063287/1‑150 (MQ=255)
                                                                                                       atgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCaa                                                                                          <  2:39682/108‑1 (MQ=255)
                                                                                                       atgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCaa                                                                                          >  1:39682/1‑108 (MQ=255)
                                                                                                       atgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttct                                                >  1:962684/1‑150 (MQ=255)
                                                                                                        tgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTa                                                                                                                         <  1:171542/76‑1 (MQ=255)
                                                                                                        tgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttctt                                               <  2:552433/150‑1 (MQ=255)
                                                                                                          aaagatgggatgAGTAGTAATATGGGGAATCCTGTAGGCCGG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCAAGCGGAACTGCTTCTTCa                                             <  2:442797/144‑1 (MQ=38)
                                                                                                           agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                            >  1:689885/1‑150 (MQ=255)
                                                                                                                gggacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATc                                                                                                       >  2:162474/1‑86 (MQ=255)
                                                                                                                gggacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc                                       <  2:1031516/150‑1 (MQ=255)
                                                                                                                gggacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc                                       >  2:762193/1‑150 (MQ=255)
                                                                                                                gggacgAGTAGTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc                                       <  1:1171223/150‑1 (MQ=255)
                                                                                                                  gacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                                >  1:1156913/1‑123 (MQ=255)
                                                                                                                  gacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCGGCGGAACCGCTTCTTCCCCAGCCtt                                     >  1:315799/1‑150 (MQ=255)
                                                                                                                  gacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                            <  1:422083/143‑1 (MQ=255)
                                                                                                                  gacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                                            >  2:422083/1‑143 (MQ=255)
                                                                                                                  gacgAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCtt                                     >  2:2484/1‑150 (MQ=255)
                                                                                                                      aGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac                                 >  2:1087683/1‑150 (MQ=255)
                                                                                                                       gTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                                           <  1:1127774/123‑1 (MQ=255)
                                                                                                                       gTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                                                       >  2:12969/1‑127 (MQ=255)
                                                                                                                       gTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                                                       <  1:12969/127‑1 (MQ=255)
                                                                                                                        tATTACTATTGTGAATCCTGTAGGCCTG‑AAAAGACGCGACAAGCGTCGCCGCAGGCATTATAAACAGGGTTCCGGATCATGCATCCCGCAATTCACTTAAAACTGATGACCAGCTTCCAGCGGACGCGCTTACTCACCAGCCTTTAacac                               >  1:1001026/1‑150 (MQ=255)
                                                                                                                         aTTAATATTGTGAATCCTGTAGGCCTG‑CTACGACCAGCGAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAAcaca                              >  1:286541/1‑150 (MQ=255)
                                                                                                                         aTTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAAcaca                              >  1:648557/1‑150 (MQ=255)
                                                                                                                             atatTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                         <  2:297077/71‑1 (MQ=255)
                                                                                                                             atatTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                                                                         >  1:297077/1‑71 (MQ=255)
                                                                                                                             atatTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCGCTTAAGAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                          >  1:703/1‑150 (MQ=255)
                                                                                                                             atatTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                          >  1:18841/1‑150 (MQ=255)
                                                                                                                               atTGTGTATCCGGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCTGGCACTATGAACAAGATGCGGGATCATGTATCCGGCAATTCTCTTGAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtg                        <  2:953103/150‑1 (MQ=39)
                                                                                                                               atTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTc                                                                                       >  2:322871/1‑87 (MQ=255)
                                                                                                                               atTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaaaa                                                                              >  2:977822/1‑96 (MQ=255)
                                                                                                                                ttGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtgg                       >  2:1010784/1‑150 (MQ=255)
                                                                                                                                   tgAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                                                     <  2:204756/101‑1 (MQ=255)
                                                                                                                                    gAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACCTAAGTGGTGtt                   <  1:731642/150‑1 (MQ=255)
                                                                                                                                     aaTCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGc                                                                   >  2:69116/1‑101 (MQ=255)
                                                                                                                                     aaTCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGtt                   <  2:862873/149‑1 (MQ=255)
                                                                                                                                      aTCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCg                 <  1:811632/150‑1 (MQ=255)
                                                                                                                                       tCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg                <  1:378330/150‑1 (MQ=255)
                                                                                                                                         cTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCg                 >  2:1146943/1‑147 (MQ=255)
                                                                                                                                          tGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtg                        >  1:628354/1‑139 (MQ=255)
                                                                                                                                              ggCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCAccc         >  2:368540/1‑150 (MQ=255)
                                                                                                                                              ggCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACCTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGGGTTCGGGCCAccc         >  1:854417/1‑150 (MQ=255)
                                                                                                                                               gCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttctt                                               >  2:74057/1‑111 (MQ=255)
                                                                                                                                                ccTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCAt                                                                                                     <  1:1029703/56‑1 (MQ=255)
                                                                                                                                                ccTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCag       >  2:1112439/1‑150 (MQ=255)
                                                                                                                                                      tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgtag  >  2:508733/1‑150 (MQ=255)
                                                                                                                                                      tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTGCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCagcgtag  <  2:810880/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTG‑ATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCCAGCGTAG  >  NC_000913_3_hsa_pgi/4229237‑4229535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.