New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 2894838 =NA (NA)25 (0.390) 16/266 3.8 2.3% noncoding (31/67 nt) REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913_3_hsa_pgi = 4229379 1061 (16.630)noncoding (4/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1118 total aligned reads displayed.

GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCC  >  NC_000913_3_hsa_pgi/4229230‑4229528
                                                                                                                                                      |                                                                                                                                                      
gCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCCGTAg                                                                                                                                                        <  1:377285/150‑1 (MQ=255)
   gagCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGcc                                                                                                                                                     >  2:975945/1‑150 (MQ=255)
        ttGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATa                                                                                                                                                >  2:667117/1‑150 (MQ=255)
           aaaCCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGa                                                                                                                                             >  2:216430/1‑150 (MQ=255)
                  ttCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCa                                                                                                                                      >  1:1107021/1‑150 (MQ=255)
                   tcccTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCaa                                                                                                                                     <  2:1036434/147‑1 (MQ=255)
                   tCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGGAGATGAAGGACGGGACGTTTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCaa                                                                                                                                     <  1:170343/150‑1 (MQ=255)
                      cTACATTTAGGCTTACTGGGAGATATGCAGTGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCg                                                                                                                                  >  2:123899/1‑150 (MQ=255)
                      cTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCg                                                                                                                                  >  1:725622/1‑150 (MQ=255)
                       tACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGt                                                                                                                                 >  1:20164/1‑150 (MQ=255)
                        aCATTTGGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCTGGATGAAGATGAAGGACGGGACGAGTATTAATATTTTGAATCCTGTAGGCCTGATAAGACGCTTGACGCGTc                                                                                                                                <  1:125315/150‑1 (MQ=255)
                        aCATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAACCGGATGAAGATGAAGGACGGGACGAGTATTGATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                <  2:1120288/150‑1 (MQ=255)
                         cATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                                                                               >  1:155592/1‑150 (MQ=255)
                         cATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                                                                               >  2:811632/1‑150 (MQ=255)
                            ttAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt                                                                                                                            <  1:969384/150‑1 (MQ=255)
                                gCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGTCGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAgg                                                                                                                        >  1:1053827/1‑150 (MQ=255)
                                gCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACTCGTCAAGCGTCGCATCAgg                                                                                                                        <  2:379237/150‑1 (MQ=255)
                                 cTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                >  1:326717/1‑141 (MQ=255)
                                 cTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGc                                                                                                                       >  1:413520/1‑150 (MQ=255)
                                 cTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTATTGTTAGGTGGCTTACAGTGTGCTGGAACAGCCGGATTAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCGTGTAGGCCTACTAAGACACGTCAAGCGTCGCATCAgga                                                                                                                       >  2:236463/1‑149 (MQ=255)
                                  ttACTGGGAGATATGCAGCGCCTGAACTCACTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGACGGATGAAGATCAAGGACGGGACGAGTATTAATATTGTGAATCCGGTAAGCCTGATAAGACGCGTCAAGCGTCGCCTCACGCa                                                                                                                      >  2:453596/1‑150 (MQ=255)
                                      tGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                                  >  1:756469/1‑150 (MQ=255)
                                      tGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                                  >  1:644926/1‑150 (MQ=255)
                                         gagaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                                                                               <  1:562079/150‑1 (MQ=255)
                                          agaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACGGTGGGCTGGAACAGGGGGCTGAAGATGTACGACGGGGGAAGGGTTCAGATTGTGAATCCTGTAGGCCTGCTAAGACGCGTCAAGGGTCGCAACGTGCACGATGacc                                                                                                              >  2:431684/1‑148 (MQ=255)
                                          agaTATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAc                                                                                                              <  1:337853/150‑1 (MQ=255)
                                            atatGCCGCGCCTGAACGCGCTGTTTTGTTCGGTGGCTTACAGTGGTCTGGAACAGCCGGATGAAGATCAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACaa                                                                                                            <  2:1021461/150‑1 (MQ=39)
                                            atatGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACaa                                                                                                            <  2:1054535/150‑1 (MQ=255)
                                             tatGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                                                                           >  1:393453/1‑150 (MQ=255)
                                                 gaGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                                       <  2:520688/149‑1 (MQ=255)
                                                 cAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGCCAAGCGTCGCATAAGGCACTATGAACAAGATGc                                                                                                       >  1:262848/1‑150 (MQ=255)
                                                  aGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATAAACCTACAGGACCGAACGAGTAGTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCACCAGGCACTATGAACAAGATGcc                                                                                                      >  2:1077662/1‑150 (MQ=38)
                                                   gggcCTGCACTCGCTGTTTTGTTCGGTGGCTTACAGCGTGCTGGCACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATCTTGTGCATGCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCg                                                                                                     <  1:699368/148‑1 (MQ=38)
                                                      ccTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATACGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                                  >  1:221586/1‑134 (MQ=255)
                                                       cTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                <  2:634071/119‑1 (MQ=255)
                                                       cTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGc                                                                                                                       <  2:165576/128‑1 (MQ=255)
                                                        ttaaCTCGCTGTTTTGCTCGGTGGCTTACAGTGGGCGGGAACAGTCGGATGAAGATGAAGGACGGGACGAGTATGAATATTTTGAACCCTGTCGGCCTGATAAGACGCGTCAAGCGTCGCAGCAGGCACTATGAACAAGATGCCGGATCa                                                                                               <  2:305978/148‑1 (MQ=255)
                                                        tGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGGTCa                                                                                               >  1:810880/1‑150 (MQ=255)
                                                          aaCTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATg                                                                                             <  2:1103076/150‑1 (MQ=255)
                                                            cTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCa                                                                                           >  1:296792/1‑150 (MQ=255)
                                                             tCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCAt                                                                                              <  1:604454/146‑1 (MQ=255)
                                                             tCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCAt                                                                                          >  1:1151359/1‑150 (MQ=255)
                                                             gcGCTGTGTTGTTCGGGGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCAt                                                                                          <  2:649678/149‑1 (MQ=255)
                                                               gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATcc                                                                                        >  2:155982/1‑150 (MQ=255)
                                                                cTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCg                                                                                       >  1:108790/1‑150 (MQ=255)
                                                                      tGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAAtt                                                                                 >  2:1157328/1‑150 (MQ=255)
                                                                       gTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATATGACGCGTCAAGCGTCTCAGCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatctt                                                                                <  1:1164529/150‑5 (MQ=255)
                                                                       gTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTc                                                                                >  1:78040/1‑150 (MQ=255)
                                                                        ttCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                                                                                <  1:544867/102‑1 (MQ=255)
                                                                          cGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGc                                                                                                                                   >  1:520302/1‑97 (MQ=255)
                                                                                 ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGGCGAGTATTAATATTGTGAATCCTAAACGCCAGCATAGTGGCGTCAAGCGTGACATCAGGGCCGTGGAAAATATTCCCGGATCATGCAACAGGCTATTCCATNAAAAAc                                                                      >  2:493325/1‑150 (MQ=255)
                                                                                 ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAAc                                                                      >  2:613001/1‑150 (MQ=255)
                                                                                   aCAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                                                                    <  1:988380/150‑1 (MQ=255)
                                                                                   aCAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                                                                    <  2:924189/150‑1 (MQ=255)
                                                                                    cAGTGTGCTGAAACAGCCGGATGAAGATGAAGTACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                                                                   <  1:1139802/150‑1 (MQ=255)
                                                                                      gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGAAAGCTTCGGATGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGa                                                                 <  1:869748/150‑1 (MQ=38)
                                                                                         tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                                              <  2:687502/150‑1 (MQ=255)
                                                                                            tGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAt                                                                                                  >  1:439343/1‑112 (MQ=255)
                                                                                             ggAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                                                                              <  1:478142/130‑1 (MQ=255)
                                                                                             ggAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGCGAcaacgag                                                          >  2:890820/1‑144 (MQ=255)
                                                                                              gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                         >  1:95273/1‑150 (MQ=255)
                                                                                              gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCAGGCAATTCACTTAAAAACGGTGACCAGCTTc                                                         >  2:843439/1‑150 (MQ=255)
                                                                                                aCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCCCTTAAAAACGGTGACCACCTTCCa                                                       >  1:57563/1‑150 (MQ=255)
                                                                                                   gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                                    >  1:31348/1‑150 (MQ=255)
                                                                                                    ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCCATTCACTCAAAAACGGTGACCAGCTTCCAGCgg                                                   >  2:549266/1‑150 (MQ=255)
                                                                                                       gatgaagatgaaGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGacc                                                >  2:583727/1‑148 (MQ=255)
                                                                                                          gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCCACAATACGATTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                                             >  1:627180/1‑150 (MQ=38)
                                                                                                             gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGTCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                                          >  1:79861/1‑150 (MQ=255)
                                                                                                             gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                                          <  2:95273/150‑1 (MQ=255)
                                                                                                                   ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAcc                                               <  1:457312/139‑1 (MQ=255)
                                                                                                                    gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAgg                                                                                                                        >  2:262755/1‑66 (MQ=255)
                                                                                                                    gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCa                                   >  2:567386/1‑150 (MQ=255)
                                                                                                                     actgtacgAGTATTAATATTGTGAATCCTGGAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAg                                  <  1:841588/145‑1 (MQ=255)
                                                                                                                       gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAcc                                                               <  2:709975/119‑1 (MQ=255)
                                                                                                                        ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCt                               >  2:734035/1‑150 (MQ=255)
                                                                                                                        ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACGCTGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCCTCGGAACCGCCTCTTCACCAGcat                               >  2:475080/1‑148 (MQ=39)
                                                                                                                            gAGTATTAATATTGTGAATCCTGTAGTCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAATAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa                           <  1:1066867/150‑1 (MQ=255)
                                                                                                                            gAGTATTAATATTGTGAATCCTGTAGGCCTGATGCCTCGCGACATTCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACGTAAAAACGGAGAACAGCTTCCAGCGGAACCGGTTCTTCACCAGCCTTaaa                           >  1:286012/1‑150 (MQ=255)
                                                                                                                              gTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                                    <  1:1127774/123‑1 (MQ=255)
                                                                                                                              gTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGAGTAGCGTAACTCACGATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAaca                         <  1:926756/150‑1 (MQ=255)
                                                                                                                               tATTACTATTGTGAATCCTGTAGGCCTGAAAAGACGCGACAAGCGTCGCCGCAGGCATTATAAACAGGGTTCCGGATCATGCATCCCGCAATTCACTTAAAACTGATGACCAGCTTCCAGCGGACGCGCTTACTCACCAGCCTTTAacac                        >  1:1001026/1‑150 (MQ=255)
                                                                                                                               tATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAacac                        >  1:73955/1‑150 (MQ=255)
                                                                                                                                 ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                                                                              >  2:331957/1‑94 (MQ=255)
                                                                                                                                 ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTa                             >  2:412445/1‑143 (MQ=255)
                                                                                                                                 ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACAt                      <  1:852682/150‑1 (MQ=255)
                                                                                                                                    atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                   >  1:677112/1‑150 (MQ=255)
                                                                                                                                    atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                   >  1:661472/1‑150 (MQ=255)
                                                                                                                                    atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg                   >  1:18841/1‑150 (MQ=255)
                                                                                                                                     tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgt                  <  2:18909/150‑1 (MQ=255)
                                                                                                                                      atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAACACGGCCATCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAATCACATAAatg                 <  2:792318/150‑1 (MQ=38)
                                                                                                                                      atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGACCCGCTTCTTCACCAGCCTTAAACACATAAgtg                 >  2:864078/1‑150 (MQ=255)
                                                                                                                                       ttGTGAATCCTGTAGGCGTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtgg                <  2:1138076/150‑1 (MQ=255)
                                                                                                                                       ttGTGAATCCTGTAGGCCTGATAAGACGCGTGGAGCGTCGCGTCATGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtgg                >  1:240519/1‑150 (MQ=255)
                                                                                                                                        tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtggt               <  1:710826/150‑1 (MQ=255)
                                                                                                                                         gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgtggtg              >  2:758309/1‑150 (MQ=255)
                                                                                                                                          tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGgtgt             >  1:908007/1‑150 (MQ=255)
                                                                                                                                              tCCTGTAGGCCTGATAGGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg         >  1:1033059/1‑150 (MQ=255)
                                                                                                                                              tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg         <  1:500739/150‑1 (MQ=255)
                                                                                                                                              tCCGGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCgg         <  2:287426/150‑1 (MQ=255)
                                                                                                                                                 tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGcc      >  2:351776/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGTGGTGTTCGGGCCACCC  >  NC_000913_3_hsa_pgi/4229230‑4229528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.