New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 4219847705 (10.500)25 (0.410) 19/256 3.0 3.6% coding (1252/1737 nt) aceK isocitrate dehydrogenase kinase/phosphatase
?NC_000913_3_hsa_pgi = 4219854 687 (11.190)coding (1259/1737 nt) aceK isocitrate dehydrogenase kinase/phosphatase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 784 total aligned reads displayed.

GGACACCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACGGGC  >  NC_000913_3_hsa_pgi/4219705‑4220003
                                                                                                                                                     |                                                                                                                                                     
    acCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGCACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccg                                                                                                                                                   <  1:54404‑M2/150‑5 (MQ=255)
      ccAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACGGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGGTGGTgccgct                                                                                                                                                 <  1:694244‑M2/150‑7 (MQ=255)
      ccAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCGTCTTTATCTTTAGGGGCGGGTGGTgccgcc                                                                                                                                                 <  1:555463‑M2/150‑7 (MQ=255)
       cAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctc                                                                                                                                                >  1:591463‑M2/1‑143 (MQ=255)
       cAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctc                                                                                                                                                >  2:273330‑M2/1‑143 (MQ=255)
       cAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctc                                                                                                                                                <  2:906690‑M2/150‑8 (MQ=255)
       cAGGAGGTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctc                                                                                                                                                >  2:432526‑M2/1‑143 (MQ=255)
         ggAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAGAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctcaa                                                                                                                                              <  1:164511‑M2/150‑10 (MQ=255)
          gAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctcaat                                                                                                                                             >  1:289626‑M2/1‑140 (MQ=255)
           aGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctcaata                                                                                                                                            <  2:700574‑M2/150‑12 (MQ=255)
            gTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGACGGTgccgctcaatat                                                                                                                                           >  2:971417‑M2/1‑138 (MQ=255)
              ttGAAAACTTTGTGCTGGAGAAGCGGCCTCTTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATct                                                                                                                                         <  1:1132259/150‑1 (MQ=255)
                taaaaCTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATctgg                                                                                                                                       <  1:355451/149‑1 (MQ=255)
                gAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgct                                                                                                                                                 <  1:18273‑M2/140‑7 (MQ=255)
                gAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgct                                                                                                                                                 >  2:18273‑M2/1‑134 (MQ=255)
                gAAAACCTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATctgg                                                                                                                                       <  1:343805/150‑1 (MQ=255)
                 aaaaCTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATctggc                                                                                                                                      >  1:858818/1‑150 (MQ=255)
                  aaaCTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGGGCCGCTCAATAGctggct                                                                                                                                     >  1:203850/1‑150 (MQ=255)
                   aaCTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATctggctg                                                                                                                                    <  2:1011534/150‑1 (MQ=255)
                      tttGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATct                                                                                                                                         >  1:229627/1‑142 (MQ=255)
                           gCTGGAGAAGCGGTATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGt                                                                                                                            <  2:58162/150‑1 (MQ=255)
                            cTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTg                                                                                                                           >  1:375849/1‑150 (MQ=255)
                               gagaAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGaa                                                                                                                        <  1:1029382/150‑1 (MQ=255)
                               gagaAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGaa                                                                                                                        >  1:1177606/1‑150 (MQ=255)
                                agaAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAg                                                                                                                       <  1:839871/150‑1 (MQ=255)
                                  aaGCGGCATAGTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGt                                                                                                                     <  1:1005281/150‑1 (MQ=255)
                                    gctgcgtatTGCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTca                                                                                                                   <  2:310275/144‑1 (MQ=255)
                                    gCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCCGCGGAAAAAATCACCGATCTCCGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGAGAATGGTGCCGCTCACTATCTGGCTGGAACAAGTGGAAGGTca                                                                                                                   >  2:288851/1‑150 (MQ=255)
                                    gCGGCATATGTCCCCGGAATTAATGGAACTACGGCTTCGGGAAGCAGCGGAAGAAATCACCGATCTCGGCGAACAAATTGGGATTCGCCATCTTTATCTTGAGCGGCGGATTGTGCCGCTCAATAGCTGGCTGGAACAAGTGGAAGGTca                                                                                                                   <  2:200226/150‑1 (MQ=255)
                                      ggCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTcagc                                                                                                                 <  2:55052/150‑1 (MQ=255)
                                       gCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAGGGTcagca                                                                                                                >  1:98101/1‑150 (MQ=255)
                                       gCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTcagca                                                                                                                >  2:986735/1‑150 (MQ=255)
                                       gCATATTTCCCCGGCATTAATGGAAGTACTGCTTCAAGTCTCATCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCAGCTTTATATTGAGCGGCTGATGGTGCCGCTCAATATTTGGCTGGAACAAGTGGAAGGTcagca                                                                                                                >  2:505166/1‑150 (MQ=255)
                                       gCATACTTCCCCGGTATTAATGGAATTACTGGTTCAGGAAGCAGAGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTcagca                                                                                                                <  2:381260/150‑1 (MQ=255)
                                        cATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAAAAAATTGTGATTCGCCATGTTTATAATAAGGGTCGGATGGTACCGCTCAAGCTCTGGGAGCAAAAAGAGGAAAGTcagcag                                                                                                               >  1:1157246/1‑150 (MQ=255)
                                         atatTTCCCCGGCATTAATGGAATTACTGCATCAGGAAGCAGCGGAAAAAATCACAGATCCCGGCGAAACACTTGAGATTCGCCGTCTTTATATTGAGCGTCGAATGGCGCGGCGCAGTATCCGGCTGGAAACAGGGGGCGGCCAGCAGt                                                                                                              >  2:105152/1‑150 (MQ=255)
                                            tttCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGCGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTgc                                                                                                           <  2:367252/150‑1 (MQ=255)
                                                 ccGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAACTTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATGTCTGGCTGAAAAAAGTGGAAGGTCAGCAGTTGCGCGAc                                                                                                      >  2:450243/1‑150 (MQ=255)
                                                   ggCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTc                                                                                                                    <  2:13364/134‑1 (MQ=255)
                                                       ttAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGAGATTCGCCATCTTTATATTGATCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGACAtt                                                                                                >  1:998171/1‑150 (MQ=255)
                                                          aTGGAATTATTGCTTCAGGAAGCAGCGGAAAAAAGCACCGATTGCGGCGTACCAGTTGTGATTTGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaa                                                                                             <  2:1112550/150‑1 (MQ=255)
                                                          aTGGAATTAGTGCTTCAGGAAGCAGCGGAAAATATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaa                                                                                             <  2:815154/150‑1 (MQ=255)
                                                          aTGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTcagca                                                                                                                >  2:12246/1‑131 (MQ=255)
                                                          aTGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACTCCATTgaa                                                                                             <  2:414304/150‑1 (MQ=255)
                                                          aTGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaa                                                                                             <  1:731819/150‑1 (MQ=255)
                                                          aTGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaa                                                                                             <  2:792603/150‑1 (MQ=255)
                                                          aTGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaa                                                                                             <  1:434527/150‑1 (MQ=255)
                                                             gAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGtt                                                                                                             >  1:785623/1‑131 (MQ=255)
                                                             gAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaagaa                                                                                          <  2:871641/150‑1 (MQ=255)
                                                             gAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaagaa                                                                                          >  2:65016/1‑150 (MQ=255)
                                                                  aCTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACgg                                                                                     <  2:25135/150‑1 (MQ=255)
                                                                   cTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTg                                                                                                                                                      >  1:770735‑M2/1‑83 (MQ=255)
                                                                    tGCTTCAGGAAGCAGCGGAAAAAATCACCGAACTCTGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTa                                                                                   >  1:472863/1‑150 (MQ=255)
                                                                             aaGGAGGGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTc                                                                          <  2:624421/150‑1 (MQ=255)
                                                                              agcagcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGNCATNGAAGAATACGGTAACGCTATTCg                                                                         >  1:1062687/1‑150 (MQ=255)
                                                                                  gcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCAtt                                                                                                <  2:1121643/123‑1 (MQ=255)
                                                                                  gcGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGc                                                                               >  1:705753/1‑140 (MQ=255)
                                                                                   cGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGc                                                                    >  2:66754/1‑150 (MQ=255)
                                                                                    ggAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATGTGGCTGGAACAAGTGGATGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAATGCTATTCGCCAGCt                                                                   >  1:1091737/1‑150 (MQ=255)
                                                                                          aaTCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGt                                                                                                                     >  2:1173670/1‑94 (MQ=255)
                                                                                            tCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCgctg                                                           >  1:665386/1‑150 (MQ=255)
                                                                                              aCCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGTTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCgctgct                                                         >  1:41015/1‑150 (MQ=255)
                                                                                              aCCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCGATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCgctgct                                                         >  2:770434/1‑150 (MQ=255)
                                                                                              aCCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACCAGTGGAAGGTCAGCAGTTGCGCGACACCATTGAAGAATACGGTAACGCTATTCGGCAGCTTGCCgctgct                                                         >  1:762104/1‑150 (MQ=255)
                                                                                                 gATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCCGCTTGCCCCTTCTCAc                                                      >  2:156633/1‑150 (MQ=255)
                                                                                                 gATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAAc                                                      <  1:613049/150‑1 (MQ=255)
                                                                                                 gATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAAc                                                      <  1:450670/150‑1 (MQ=255)
                                                                                                   tctcGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACAt                                                    >  2:1138587/1‑150 (MQ=255)
                                                                                                   tctcGGCGAACAAATTGTGATTCGCAATGCAGGTATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACAt                                                    >  2:560553/1‑150 (MQ=255)
                                                                                                     tcGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTCGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCAAACTGGCCGCTGCTAACAttt                                                  >  1:1040347/1‑150 (MQ=255)
                                                                                                       ggCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctcaatataaagatggcgaatcacaatttgttcgccgagatcggtgattttttccgctgcttcctgaagcagtaattcc                                                                    >  1:922793‑M2/1‑47 (MQ=255)
                                                                                                       ggCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTgccgctcaatataaagatggcgaatcacaatttgttcgccgagatcggtgattttttccgctgcttcctgaagcagtaattcc                                                                    <  2:922793‑M2/130‑84 (MQ=255)
                                                                                                          gAACAAATTGTGATTCGCCATCTTTATATTGAGCTGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCt                                             <  2:755008/150‑1 (MQ=255)
                                                                                                           aaCAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCt                                             <  2:231871/149‑1 (MQ=255)
                                                                                                           aaCAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCCCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTg                                            <  1:630236/150‑1 (MQ=255)
                                                                                                              aaaTTGTGATTCGGCATCTTTATATTGAGCGGCGGATGGTGCCGCTTAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCg                                         <  2:340472/150‑1 (MQ=255)
                                                                                                              aaaTTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTgaaga                                                                                           <  1:495235/100‑1 (MQ=255)
                                                                                                                aTTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTcc                                               <  1:246886/142‑1 (MQ=255)
                                                                                                                   gtgATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATg                                    <  2:779884/150‑1 (MQ=255)
                                                                                                                    tgATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTcc                                               <  2:735918/138‑1 (MQ=255)
                                                                                                                    tgATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGc                                   >  1:529515/1‑150 (MQ=255)
                                                                                                                      aTTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCtt                                 >  1:330532/1‑149 (MQ=255)
                                                                                                                      aTTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGAGGAGGGTGAGGTGTTGCGCGACGCCATTGCAGAATACGGTAACGCTATTCACCAGCTGGACGCTGCTAACATTTTCCCTGGCCGCctgctg                                 >  2:959454/1‑150 (MQ=255)
                                                                                                                       ttCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGt                                >  1:308156/1‑150 (MQ=255)
                                                                                                                       ttCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGt                                >  1:973154/1‑150 (MQ=255)
                                                                                                                        tCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTACCGTTTTCCCTGGCGACATGCTGtt                               <  2:856621/150‑1 (MQ=255)
                                                                                                                        tCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGtt                               <  1:128418/150‑1 (MQ=255)
                                                                                                                           ccATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGcc                                                                                                   >  1:817000/1‑79 (MQ=255)
                                                                                                                           ccATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTaa                            >  1:279331/1‑150 (MQ=255)
                                                                                                                            cATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTaaa                           <  1:963463/150‑1 (MQ=255)
                                                                                                                              tCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTaaaaa                         <  1:945346/150‑1 (MQ=255)
                                                                                                                                tttATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACt                       >  2:48023/1‑150 (MQ=255)
                                                                                                                                 ttATATTGAGCGGCGGATTGTTCCGCTCAATATCTGGCGGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCTGGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACtt                      <  1:640052/150‑1 (MQ=255)
                                                                                                                                   atatTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCg                    <  1:145141/150‑1 (MQ=255)
                                                                                                                                     atTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGgt                  <  1:893253/150‑1 (MQ=255)
                                                                                                                                      ttGAGCGGCGGATGGTgccgctcaatataaagatggcgaatcacaatttgttcgccgagatcggtgattttttccgctgcttcctgaagcagtaattccattaat                                                              <  2:1081734‑M2/105‑90 (MQ=255)
                                                                                                                                            ggcggATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACGTGCTGTTTAAAAACTTCGGTGTCAccc           >  1:1119239/1‑150 (MQ=255)
                                                                                                                                             gcggATGGTgccgctcaatataaagatggcgaatcacaatttgttcgccgagatcggtgattttttccgctg                                                                                        >  1:574895‑M2/1‑9 (MQ=255)
                                                                                                                                                   ggTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGttt                              >  2:836941/1‑124 (MQ=255)
                                                                                                                                                    gTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACggg   >  2:60579/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGACACCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACGGGC  >  NC_000913_3_hsa_pgi/4219705‑4220003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.