New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 4239778942 (17.640)4 (0.080) 3/248 NT 0.46% intergenic (+20/+27) yjbH/yjbT DUF940 family extracellular polysaccharide protein/putative periplasmic protein
?NC_000913_3_hsa_pgi = 4239788 869 (17.730)intergenic (+30/+17) yjbH/yjbT DUF940 family extracellular polysaccharide protein/putative periplasmic protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1247 total aligned reads displayed.

TCGTCTGGCCCGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTGCCTGAGCG  >  NC_000913_3_hsa_pgi/4239630‑4239926
                                                                                                                                                    |                                                                                                                                                    
gatggcccattcgctcaggcaaccagacctgcaaccgatatcgacggacaggaagacagaatgttttcgcctttacacaccagatcgcaaaccgggagtgaactgcgttcctgatggctcgacaggccattaagaatgAAGGTGCCAGt                                                                                                                                                      >  2:801070‑M1/139‑149 (MQ=255)
     gggCCCGAGACGCAGCCGTGCGGCGGTTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCg                                                                                                                                                 <  2:145976/148‑1 (MQ=255)
       gCCCGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGATTTCGca                                                                                                                                               >  1:325634/1‑149 (MQ=255)
        cccGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGcac                                                                                                                                              >  1:560828/1‑149 (MQ=255)
               cGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactgg                                                                                                                                       >  2:162542‑M2/1‑144 (MQ=255)
                 cAGCCGTGCGGCGATTGGCTGGACGCCACTGACCAGGGAGTGTGGACAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTGCGCTAAGTCATGGGAAAGAGGACAAGTGTCGcactccacggca                                                                                                                                     >  2:216104/1‑142 (MQ=255)
                  aGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGATGCCAGTTTTCGCACTAactggcac                                                                                                                                    <  1:289013‑M2/149‑9 (MQ=255)
                  aGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGCTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactggcac                                                                                                                                    >  1:504132‑M2/1‑141 (MQ=255)
                   gCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactggcacc                                                                                                                                   >  1:214594‑M2/1‑140 (MQ=255)
                    ccGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactggcacct                                                                                                                                  <  1:599731‑M2/149‑11 (MQ=255)
                     cGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTCTGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactggcacctt                                                                                                                                 >  1:927307‑M2/1‑138 (MQ=255)
                          ggcgATTGGCTGGACGCCGTTGACGCGTGACGGTGGTCAGCAACTTGGGCGTGCGAACCAATTGGATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTc                                                                                                                            <  1:231499/149‑1 (MQ=255)
                              aTTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTaa                                                                                                                        <  1:786698/149‑1 (MQ=255)
                               ttGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAAt                                                                                                                       <  1:154430/149‑1 (MQ=255)
                                tGGCTGGACGCCGCTGACGCGTGACGTTTGTCAGCAACTTCGGCGTAAGTTCCAGTTGTATGACATGATCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATg                                                                                                                      <  1:636095/149‑1 (MQ=255)
                                tGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATg                                                                                                                      <  2:401598/149‑1 (MQ=255)
                                 ggCTGGACGCCGCTGACGCGTGAGGGTGGTCAGCAACTGGGGCGTAAGTTCCAGTTGTATGACATGACCAGGGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATgg                                                                                                                     <  2:24418/149‑1 (MQ=255)
                                  ggtGGAAGCCGCTGACGCGTGACGGTGGTCAGCAAATTGGGCGTAAGTTCCAGTTGGATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAGAGGTCGCAGTTGTCGCACTCACTGGCACCTTCATTCTTAATGGc                                                                                                                    <  1:490710/147‑1 (MQ=255)
                                   cTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATGTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGcc                                                                                                                   <  2:899461/149‑1 (MQ=255)
                                         ggcgcTGACGCGTGTGGGTGTTCGTGAACGGGGGCGAAAGTTCCAGTTGTAGGACATGACCAGCGACCGTAGCGTCAATTTCCGCGAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCAATCGCACCTTCATTCTTAATGGCCGGTCGa                                                                                                             <  2:990102/147‑1 (MQ=255)
                                         gccgcTGACGCGTGACGGGGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCCGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGa                                                                                                             <  2:74007/149‑1 (MQ=255)
                                           cgcTGACGCGTGACGGTGGTCAGCACCGCTGACGAAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTCCCGCTAAGTCATGGGACAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCgcgc                                                                                                           >  2:721265/1‑149 (MQ=255)
                                               gACGAGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTTTATGAAATGACCAGCGACCGTAGCGGCAATTTCCGTTAAGCCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATc                                                                                                       <  1:647399/149‑1 (MQ=255)
                                                 cgcgTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCGGCGACCGCAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAg                                                                                                     <  1:389948/149‑1 (MQ=255)
                                                  gcgTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCATCGGCCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATAGCCTGTCGAGCCATCAgt                                                                                                    >  1:536637/1‑148 (MQ=255)
                                                  gcgTCACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTGGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCaag                                                                                                    >  2:763342/1‑147 (MQ=255)
                                                     tGACGGTGGTCAGCAAATTGGGCGTAAGTTCCAGTTGTATGACATGACCAGAGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAAc                                                                                                 <  1:343550/149‑1 (MQ=255)
                                                       aCGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGc                                                                                               >  1:553222/1‑149 (MQ=255)
                                                       aCGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGACCTGTCGAGCCATGAGGAACGc                                                                                               >  1:890010/1‑149 (MQ=255)
                                                         ggtggtCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAg                                                                                             <  1:576484/149‑1 (MQ=255)
                                                           ttgtCAGCAACGTAGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGtt                                                                                           <  1:430610/147‑1 (MQ=255)
                                                           tggtCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACGTTACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCCCTCACTGGCACCTTCATTCTTAATGAACTGTCGAGCCATCAGGAACGCAGtt                                                                                           <  2:820928/149‑1 (MQ=255)
                                                           aagtCAGGAACTTGGGCGTAAGTTCCAGTTGGATGACATGATCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGtt                                                                                           <  2:956074/147‑1 (MQ=255)
                                                             gtCAGCAACTTGGGCGTAAGTCCCAGTTGTATGACATGACCAGCGACCGTCGCGTCAATTTCCGCTAAGTCATGGTAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCa                                                                                         <  1:945865/149‑1 (MQ=255)
                                                              tCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCactggca                                                                                                                                     >  2:420724‑M2/1‑97 (MQ=255)
                                                              tCAGCAACTTGAGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCGTTCTTAATGGCGCGTCGAGCCGTCAAGAACGAAGTTccc                                                                                        >  2:337474/1‑147 (MQ=255)
                                                                aGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTc                                                                                      >  1:104840/1‑149 (MQ=255)
                                                                 gCAACTCGGGCTGAGGTTGCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCAGCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTcc                                                                                     <  2:653272/149‑1 (MQ=255)
                                                                   aatttGGGGGTAAGTGCCAGTTGTAGGACAGGACCAGCGACGGTAGCGCCAATTTGGGCCAAGTTATGGGGAAGGCGCCAGTTTTCGCAATCACTGGAACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCg                                                                                   <  2:503155/146‑1 (MQ=255)
                                                                      ttGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGACCGCAGTTCACTCCCGGtt                                                                                >  2:542652/1‑149 (MQ=255)
                                                                       tGGGCGGAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAAGTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGttt                                                                               <  2:701412/149‑1 (MQ=255)
                                                                         ggCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCt                                                                                                                  <  2:978231/112‑1 (MQ=255)
                                                                         ggCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCt                                                                                                                  >  1:978231/1‑112 (MQ=255)
                                                                            gTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTg                                                                              <  2:852435/145‑1 (MQ=255)
                                                                             gaaGTTCCTGGTGGATGAGATGACCAGCGGCCGTAGGGGCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGGTTGCGCAGTCTCTGGCAGCTTCATTTTTAATGGCCTGTCGAGCCATCAGGAGCGCAGTTCACTCCCGGTTTGCGATc                                                                         <  2:465889/148‑1 (MQ=255)
                                                                               aGTTCCAGGTGTAGGACATGACCAGCGACCGTAGCGGCAATTGCCGCTAAGTCATGGGAAAGGTGCCAGGTTTCGCACTCACTGGCACCTTCATCCTTAATGGCCTGGCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTg                                                                       <  2:393743/149‑1 (MQ=255)
                                                                                 ttCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTAACTGGCACCTTCATTCTTAATGGCCTGTCGAGGCATCAGGAAAACAGTTCACTCACGGTTTGCGAtattag                                                                     >  2:183915/1‑144 (MQ=255)
                                                                                  tCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTCCACCCCCGGTTTGCGATCGGgtg                                                                    >  1:898672/1‑149 (MQ=255)
                                                                                   ccAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgt                                                                   <  2:917618/149‑1 (MQ=255)
                                                                                   ccAGTTGTAAGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCCGgtgt                                                                   <  2:871693/149‑1 (MQ=255)
                                                                                        tgaatgaaatggcCGGCGACCGTGAGGTCAAATTCCGCTAAGTAAGGGGAAAGGGGCCAGTTTTCGCAGTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCTATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTaaa                                                              <  2:434008/146‑1 (MQ=255)
                                                                                         gTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                                                             <  2:57076/149‑1 (MQ=255)
                                                                                         gTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                                                             <  1:679972/149‑1 (MQ=255)
                                                                                         gTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                                                             <  1:695461/149‑1 (MQ=255)
                                                                                          tATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGCTCTGGTGTGTAAAgg                                                            >  1:469574/1‑149 (MQ=255)
                                                                                              acatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGGTGGCGATCTGGTGTGTAAAgaagaa                                                        >  1:399567/1‑144 (MQ=255)
                                                                                                atgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaaa                                                      <  1:622357/149‑1 (MQ=255)
                                                                                                atgacCAGCCACCGGAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaaa                                                      <  2:781761/149‑1 (MQ=255)
                                                                                                    tcAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACAtt                                                  <  1:801879/148‑1 (MQ=255)
                                                                                                    ccAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTc                                                                                                               >  1:19382/1‑88 (MQ=255)
                                                                                                     cAGCGACCGTAGCGTCAATTTCTGCTAAGTCAGGGGAAAGGTGCAAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTc                                                 <  2:321436/149‑1 (MQ=255)
                                                                                                     cAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTc                                                 >  2:638994/1‑149 (MQ=255)
                                                                                                     cAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTc                                                 >  2:268092/1‑149 (MQ=255)
                                                                                                     cAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGGGTAAAGGCGAAAACATTc                                                 >  1:716347/1‑149 (MQ=255)
                                                                                                      aGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCt                                                <  2:615286/149‑1 (MQ=255)
                                                                                                      aGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTGTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCt                                                <  1:26137/149‑1 (MQ=255)
                                                                                                         gACCTTAGCGTCAATTTCTGTTATGTCATGGGAAAGGTGTCAGTTTTCTCACTTACTGGCACCTTAATTCTTAAGGGCTTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTc                                             <  1:302858/149‑1 (MQ=255)
                                                                                                            cGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGTCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTc                                          <  1:243419/149‑1 (MQ=255)
                                                                                                                 cGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTc                                     >  1:170540/1‑149 (MQ=255)
                                                                                                                  gTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGACCGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTcc                                    <  2:102479/149‑1 (MQ=255)
                                                                                                                   tCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTTATACTTAATGGCTTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGACGAAACCATTCTGTCTTCCTGTCCg                                   >  2:367096/1‑149 (MQ=255)
                                                                                                                     aaTTTCAGATTAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTc                                 <  1:449546/149‑1 (MQ=255)
                                                                                                                       tttCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACAtt                                                  <  2:597994/130‑1 (MQ=255)
                                                                                                                            gCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCGCTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCg                          >  1:820307/1‑149 (MQ=255)
                                                                                                                              tAAGTCATGTGAAAGGTGCCAGTTTTCGCACTCACTGTCACCTTCATTCTTAATGGCCTTTCGAGCCATCAGGAACGCAGTTCACTCCCTGTTTGCTATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGt                        <  1:1000309/149‑1 (MQ=255)
                                                                                                                                aGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTCTTTTCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTg                      <  1:993723/149‑1 (MQ=255)
                                                                                                                                  tCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                                                             >  1:726790/1‑108 (MQ=255)
                                                                                                                                  tCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGCTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCACTCGATACCGATTGct                    >  2:296732/1‑148 (MQ=255)
                                                                                                                                   cATTGGAAAGGTGCTATTTTTCGTACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAg                   <  1:369212/149‑1 (MQ=255)
                                                                                                                                    aTGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGAGCTGGTGTGTAAAGGCGAAAATATTCTGTCTTCCTGTCCGTAGATATCGGTTGCAgg                  >  2:483683/1‑149 (MQ=255)
                                                                                                                                     tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACTCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGt                 >  1:965857/1‑149 (MQ=255)
                                                                                                                                     tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAg                                                                                             >  2:124500/1‑73 (MQ=255)
                                                                                                                                     tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACAtt                                                  <  1:85904/116‑1 (MQ=255)
                                                                                                                                     tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGt                 >  1:658445/1‑149 (MQ=255)
                                                                                                                                        gAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGCACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTg              >  1:845547/1‑149 (MQ=255)
                                                                                                                                          AAGGTGCCAGTTTTCGCAATCACTGGCACCTTCATTCTTAATGGGCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATGGGTTGCAGGTCTGGt            <  2:671218‑M1/149‑1 (MQ=255)
                                                                                                                                           aGGTGCCAGTgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaatttgagaacaaccgtcacgcgtcagcggcgtccagccaatcgccgcacgg           >  1:137265‑M1/1‑10 (MQ=255)
                                                                                                                                             gTGCCAGTgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaagttgctgaccaccgtcacgcgtcagcggcgtccagccaatcgccgcacggct         <  1:873605‑M1/149‑142 (MQ=255)
                                                                                                                                              TGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTGcc        <  1:766144‑M1/149‑1 (MQ=255)
                                                                                                                                               gCCAGTgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaagttgctgaccaccgtcacgcgtcagcggcgtccagccaatcgccgcacggctgc       <  1:912753‑M1/149‑144 (MQ=255)
                                                                                                                                               GCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTACCt       <  1:125046‑M1/149‑1 (MQ=255)
                                                                                                                                                ccAGTgagtgcgaaaactggcacctttcccatgacttaacggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgccccagttgctgacccccgtcccgcgtcagccgcctccagccaatcgccgcccggctcag      >  2:350913‑M1/1‑5 (MQ=255)
                                                                                                                                                CCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTACAGGCGAAAACATTCTGTCTTCCTATCAGCCGCTATCGGTTGGCGGTTTCGttgcttc      <  2:285846‑M1/149‑4 (MQ=255)
                                                                                                                                                CCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCGGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTACAGGGCTGGTTGCCTg      <  1:206836‑M1/149‑1 (MQ=255)
                                                                                                                                                 cAGTgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaagttgctgaccaccgtcacgcgtcagcggcgtccagccaatcgccgcacggctgcgg     >  1:419554‑M1/1‑4 (MQ=255)
                                                                                                                                                 cAGTgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaagttgctgaccaccgtcacgcgtcaacggcgtccagccaatcgccgcacggctgcgt     >  1:518083‑M1/1‑4 (MQ=255)
                                                                                                                                                  agtgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggaacttacgcccaagttgctgaccaccgtcacgcgtcagcggcgtccagccaatcgccgcacggctgcgtg    >  1:742563‑M1/1‑3 (MQ=255)
                                                                                                                                                    tgagtgcgaaaactggcacctttcccatgacttagcggaaattgacgctacggtcgctggtcatgtcatacaactggcacttacgcccaagttgctgaccaccgtcacgcgccatcggcgtccccacaatcgccgcacggctgcgtgtc  >  2:528933‑M1/1‑1 (MQ=255)
                                                                                                                                                    TTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTGCCTGAGCg  <  1:610572‑M1/149‑1 (MQ=255)
                                                                                                                                                    TTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTGCCTGAGCg  <  1:273058‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCGTCTGGCCCGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCCTGTCCGTCGATATCGGTTGCAGGTCTGGTTGCCTGAGCG  >  NC_000913_3_hsa_pgi/4239630‑4239926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.