New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	993282 =	38 (0.710)	3 (0.060)	3/262	NT	7.6%	coding (763/768 nt)	ssuB	aliphatic sulfonate ABC transporter ATPase
	?	NC_000913_3_hsa_pgi	993296 =	36 (0.700)					coding (749/768 nt)	ssuB	aliphatic sulfonate ABC transporter ATPase

CAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATT  >  NC_000913_3_hsa_pgi/993135‑993430                                                                                                                                                    |                                                                                                                                                     cAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGCGAAGATAACTAAAGCACTTGCTTGATAAATAACCGAATAGCAGCAATAGCGCCACCATTCAGGGAAATCAcccc                                                                                                                                                     >  1:475907/1‑149 (MQ=255) cAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTCCATTGTGTGCGAACCGACTGAAGACAATATCGCCGCCATTCGGGGAATTTAcccc                                                                                                                                                     >  1:982274/1‑149 (MQ=255)  cgggtgctgttaattgaagagggaaaaattggtctggatttgacagtggatatcccccgtccgcgtcgattagggtcggtgcgattagcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCt                                                                                                                                                    >  2:804091‑M1/147‑149 (MQ=255)  cgggtgctgttaattgaagagggaaaaattggtctggatttgacagtggatatcccccgtccgcgtcgattagggtcggtgcaattagcttagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCt                                                                                                                                                    >  1:944597‑M1/147‑149 (MQ=255)  aaaCGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCt                                                                                                                                                    >  1:742393/1‑149 (MQ=255)       tCAGGAGAAAATGCGTGCGGCGTTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGtttt                                                                                                                                               <  1:710570/149‑1 (MQ=255)       tCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGtttt                                                                                                                                               >  2:695465/1‑149 (MQ=255)             gaAAATGCGCGCGGCGCTGGAACCGTTGAAAGGGCTGGAAAATCTGTCTAACGATCGGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAgg                                                                                                                                         <  1:982354/149‑1 (MQ=255)                aaTGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTTAGGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGGATATACCCCTGTTTTCTCAGGCGa                                                                                                                                      >  1:641318/1‑149 (MQ=255)                      gggaaaaattggtctggatttgacagtggatatcccccgtccgcgtcgattagggtcggtgcgattagcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTCa                                                                                                                                >  1:768961‑M1/127‑149 (MQ=255)                                         aaaGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCACATTCCACACGTTGCATCa                                                                                                             >  2:183037/1‑149 (MQ=255)                                                 ggAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGc                                                                                                     <  1:302428/149‑1 (MQ=255)                                                       tctctcTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCAGAATTCATAGTCACCACGTTGCATCACCCGTTGCAACAcc                                                                                               >  1:525821/1‑149 (MQ=255)                                                             tGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCATTTCAACACCCCCGCt                                                                                         >  2:625368/1‑149 (MQ=255)                                                                 gATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATTGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCa                                                                                     <  1:308180/149‑1 (MQ=255)                                                                     tGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTc                                                                                 >  1:720614/1‑149 (MQ=255)                                                                     tGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAAATTCACCACGTTGCATCCCCCGTTGCAACACCTCCGCTTCCAGccc                                                                                 >  2:356101/1‑147 (MQ=255)                                                                        aCGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGc                                                                              <  2:304446/149‑1 (MQ=255)                                                                                aTAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCa                                                                      <  2:855597/149‑1 (MQ=255)                                                                                aTAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTAACAACGTTGCATCACCCGTTGCAAAACATCCGCTTCCAGCTCAGCTAATCGCa                                                                      >  1:874904/1‑149 (MQ=255)                                                                                  aaCTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCAcc                                                                    >  1:606451/1‑149 (MQ=255)                                                                                  aaCTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCAcc                                                                    <  2:742393/149‑1 (MQ=255)                                                                                   aCTAAAGCACTGGCTTGATAAATAACCGAATGGGAGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGCTTCAGATTCACCACGTTACATCACCCGTTGCAACACATCCGCTTCACGCTCCACTAATCGCACCg                                                                   >  2:563746/1‑149 (MQ=255)                                                                                         gcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTc                                                                                                                                 <  2:146597‑M1/22‑1 (MQ=255)                                                                                         gcggagctggaagcggaggtgttgcaacgggtgatgcaacgtggtgaatctgaaactcgCCTGTTTTCTCAGGCGAGTTTc                                                                                                                                 >  1:146597‑M1/60‑81 (MQ=255)                                                                                           aCTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAACTCCGCTAATCGCACCGCCCCTAAt                                                           >  2:459402/1‑149 (MQ=255)                                                                                            cTGGCTTGATAAATAATCGAATGGCGGCAATTGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATc                                                          <  1:554267/149‑1 (MQ=255)                                                                                                   gATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCa                                                                                                                <  1:527665/88‑1 (MQ=255)                                                                                                   gATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCa                                                                                                                >  2:527665/1‑88 (MQ=255)                                                                                                    ataaataaCCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGa                                                  >  1:965632/1‑149 (MQ=255)                                                                                                         taaCCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACgggg                                             <  2:829278/149‑1 (MQ=255)                                                                                                            ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                               >  1:173313/1‑64 (MQ=255)                                                                                                            ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                               <  2:174626/64‑1 (MQ=255)                                                                                                            ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                               <  2:173313/64‑1 (MQ=255)                                                                                                            ccGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAg                                                                                                                               >  1:174626/1‑64 (MQ=255)                                                                                                              gAATGGCGTCAAGAGCGCCTCCATCCGGGGAAGTTACCCCTTTTTTCTCACGCGAGTTTCACATTGACCACGTTGAATCACCCGTTGCAACACTTCCGCTTCCATCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGatat                                        <  2:278362/149‑1 (MQ=255)                                                                                                              gAATGGCGGCGCTATTGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGCGACGGACGGGGGatat                                        >  2:940879/1‑149 (MQ=255)                                                                                                              gAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGatat                                        >  1:518575/1‑149 (MQ=255)                                                                                                                 tGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCGCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCa                                     <  1:44786/149‑1 (MQ=255)                                                                                                                   gcggcAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACt                                   <  2:605412/149‑1 (MQ=255)                                                                                                                   gcggcAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATAGCACCGACCCTAATCGACTCGGACGGGGGAAATCAAca                                   >  1:305840/1‑148 (MQ=255)                                                                                                                         aTAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCGCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCaaa                             <  1:623116/149‑1 (MQ=255)                                                                                                                                  gtagttggggATTTTTCCCCGTTTGTCTGAGGGTCGTTTCAGGTTCACCTCGTTGCCGCACCCGTTGCAACACCTCCGCGCCTAGCTCCGCTAATCGCACCGACCCGTATCGACGCTGACGGGGGATATCCACTGTCAAATCCAGACCa                    <  2:192206/143‑1 (MQ=255)                                                                                                                                          ggAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAAt                                                                          >  1:976823/1‑87 (MQ=255)                                                                                                                                          ggAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAAt                                                                          <  2:976823/87‑1 (MQ=255)                                                                                                                                          ggAATTTACCCCTGTTTTCCCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTcc            <  2:284238/149‑1 (MQ=255)                                                                                                                                                gaCCCCTGTTTTCTCAGGCGAGTTTCAGATTCACTACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTc      <  2:982274/148‑1 (MQ=255)                                                                                                                                                    CCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATACCATGATTTATCCAGACCAATTTTTCCCTCTTCAAtt  >  2:720614‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGATAAATAACCGAATGGCGGCAATAGCGCCGCCATTCGGGGAATTTACCCCTGTTTTCTCAGGCGAGTTTCAGATTCACCACGTTGCATCACCCGTTGCAACACCTCCGCTTCCAGCTCCGCTAATCGCACCGACCCTAATCGACGCGGACGGGGGATATCCACTGTCAAATCCAGACCAATTTTTCCCTCTTCAATT  >  NC_000913_3_hsa_pgi/993135‑993430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.