| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218558 = | 65 (1.220) | 10 (0.190) +A |
9/268 | NT | 13.4% | noncoding (123/132 nt) | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913_3_hsa_pgi | = 4254047 | NA (NA) | noncoding (119/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 1048 total aligned reads displayed.
AGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATAT > NC_000913_3_hsa_pgi/4253899‑4254192 | ggtTAATGGGATTTGTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCG > 2:686829‑M2/2‑149 (MQ=255) ttACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTGCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCC > 2:545042‑M2/1‑149 (MQ=255) aCTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGAAATTTATTGAATTTGCAGATTATGGAAGCCCGGATAAGGCGTTTTGGCCGC < 1:931401‑M2/149‑1 (MQ=255) cTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTTAATTTGCAGATTATGGAAGGCCGCATACGGCCTTTTCGCCGCg < 2:286709‑M2/149‑2 (MQ=255) tGGCCTTTCTGATGATGTAAAAAAGCCGGATGATAATCCGGCGTTATTCTGGGTTACCTGATGCACGGCGGTTCTCAGGACTACACAAAACATCGACACTTATTGAATTTGCAGATTATGGAAGACCGGCAAAGGCGTATTcgcctacc > 2:164542/1‑145 (MQ=255) tGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGTCCTACACACCACATGGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCAT < 2:252194‑M2/149‑1 (MQ=255) ggCATTTCTGATTATGTAAAAAAGCCGGCTGACCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATC > 1:829871‑M2/1‑149 (MQ=255) gCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCC < 1:1002738‑M2/149‑1 (MQ=255) gCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGACCGGATAAGGCGTTTTCGCCGCATCC < 1:686724‑M2/149‑1 (MQ=255) aTTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCATGCCTACACAACTCATGGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGG > 1:945006‑M2/1‑149 (MQ=255) ttgtacgatgtaaaaaAGCCGGTAGATCAGCCGTCTTTCTTGTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCCTAATTTATTGAATTTGCAGATTATGGAATGCCGGATAAGGCGTTTTCGCCGCATCCGGCaa > 2:80335‑M2/7‑147 (MQ=255) tgatgaTGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaatt < 2:578504‑M2/149‑5 (MQ=255) tgagtgtgtaaaaaAGCCGGATGGTCCTCCTGCTTTCTTCGTGGTTGCCTGAGTCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGACGCATCCGTCaatt > 2:11072‑M2/7‑145 (MQ=255) gatgatGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattc < 1:837648‑M2/149‑6 (MQ=255) atgatgTAAAAAAGCCGGATGATCGTCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattct < 1:868826‑M2/149‑7 (MQ=255) gatgTAAAAAAGCCTGATGAGCAGTCGGTTTTCTTCTGGGTCGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctct > 2:91085‑M2/1‑141 (MQ=255) atgTAAAAAAGCCGGATGATCATCCGGTTTTCTTCTGGGTTGCCTGATGTGCGGTGCTTCTCAGGCCTACACAACACACCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctg > 1:765927‑M2/1‑140 (MQ=255) tgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTGGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgc > 1:789446‑M2/1‑139 (MQ=255) tAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACCACACATCGCAATTTATTGAATTTGCAGATTATGGAAATCCGGAAAAGGCGTTTTCGCCCCATCCGGCaattctctgctc < 2:630861‑M2/149‑13 (MQ=255) aaaaaGCCGGATGATCATCCGGCTTTCTTCTTGGTTGCTTGATGCGCTTCTTTTTTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcct > 1:889326‑M2/1‑135 (MQ=255) aaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACACCACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGTCGTTTTCGCCGCATCCagcaattctctgctcctca < 1:853638‑M2/149‑20 (MQ=255) aGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatg < 1:217390‑M2/149‑19 (MQ=255) gCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatga > 1:703781‑M2/1‑130 (MQ=255) ccGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgag < 1:815350‑M2/149‑21 (MQ=255) cGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagg > 1:352271‑M2/1‑128 (MQ=255) gatgatCATCCGGCTTTCTTCTGGGTTGCCTGACGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAACTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattccctgctcctgatgagggc < 1:746433‑M2/149‑24 (MQ=255) atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACATAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgcta < 1:666729‑M2/149‑28 (MQ=255) catcCGGCTTTCTTCTGGGTTGCCGGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaa > 1:96423‑M2/1‑120 (MQ=255) atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCACTTTATTGAATTTGCAGATTATGAAAGGCCGGATAAGGCGTTTTCCCCGCATCCGGCaattctctgctcctgatgagggcgctaaat < 2:832655‑M2/149‑31 (MQ=255) tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGTTTTTCACGCCTACATAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTCCCCCGCATCCGGCaattctctgctcctgatgagggcgctaaatg > 1:398872‑M2/1‑118 (MQ=255) tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatg < 2:977152‑M2/149‑32 (MQ=255) tcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctcctcctgatgagggcgctaaatg < 2:591190‑M2/149‑32 (MQ=255) ggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGGATTTGCAGATTATGGAAGGCCGGATAAGGCATTTTCGCCGCATACGGCaattctctgctcctgatcagggcactaagtgccg < 1:137201‑M2/149‑35 (MQ=255) ggCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGCTAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCa > 1:114479/1‑149 (MQ=255) ggCTTTCTTCTGCGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATTGCGATGTATTTAATTTGCAGATTATGGAAGGCCGGTTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccg > 2:358293‑M2/1‑115 (MQ=255) cttcttctGGGTTGCCTGGTCTGCGGCGCTTCTAAGGCCTACACAACACATCGCAATGTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgt > 2:483121‑M2/2‑112 (MQ=255) tcttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtgg < 1:614939‑M2/149‑40 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcc < 1:159751‑M2/149‑42 (MQ=255) ttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtg < 1:565493‑M2/146‑39 (MQ=255) ggTTGCCTGATGCGCGGCGCTCCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGTTTATGGAAGGTCGGATAAGGCGTTTTCGtcgcatccggcaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaa > 1:252161‑M2/1‑92 (MQ=255) gCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattat > 2:450770‑M2/1‑99 (MQ=255) ccTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattatt < 1:383641‑M2/149‑52 (MQ=255) cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGGAGATTATGGAAGGCCGGCTCAGGCGTTTTCGCCGCATCCGGCagttctctgctactgatgagggcgctaaatggcgcgtggcctgggattcttg < 1:268937‑M2/149‑53 (MQ=255) cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtgccctggaattatgc < 2:518384‑M2/149‑53 (MQ=255) aTGGGCGGCGCTTCTCAGGCCTACACAACACAGCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgatt > 2:850576‑M2/1‑94 (MQ=255) aTGCGCGGCGCTTCTCAGGCCTACACAAGACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgatt > 2:753813‑M2/1‑94 (MQ=255) tGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattg < 2:934621‑M2/149‑57 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGCAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctc < 1:645170‑M2/149‑60 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCTGGTGGTCGACGCGGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGACTg > 1:231793/1‑149 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctg < 2:888779‑M2/133‑44 (MQ=255) gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTg > 1:174700/1‑149 (MQ=255) cggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTGCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGa < 2:309272/149‑1 (MQ=255) ggcgtgtctcAGGCCTACACAACACATCGCAATTTTTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGAt < 2:382649/143‑1 (MQ=255) gcgcTTCTCAGGCCTACACAACACATCGTAATTTATTGAATTTTCATATTATGGAAGGCCGGATAAGGCGTTTTCGtcgcatccggcaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaa > 1:601458‑M2/1‑76 (MQ=255) cgcTTCTCAGGCCTAAAAAACACATCTTAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaac > 2:738295‑M2/1‑86 (MQ=255) gcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaacc < 1:89610‑M2/149‑65 (MQ=255) ttCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccat > 1:534187‑M2/1‑83 (MQ=255) tcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccatttt > 2:560368‑M2/1‑80 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgc < 2:670871‑M2/111‑36 (MQ=255) gCCTACACAACACATCGCAATTTATTGAATTTAAGGACGGTGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaa < 1:993925‑M2/149‑74 (MQ=255) ccTAAAAAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTGTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctataggtcgcgtggcctggaattattgattgctcaaaccattttgcaag > 2:419892‑M2/1‑75 (MQ=255) cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaagg > 2:123411‑M2/1‑74 (MQ=255) cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaagg < 2:233138‑M2/149‑76 (MQ=255) cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGCCCGGATAAGTCGTTTTCGCCGCATCCGGCaattctctgctcctgatcaggacgctaaatgccgcgtggcctggaattattgattgctcaaaccattttggaagg < 1:198071‑M2/149‑76 (MQ=255) acaacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggcattattgattgctcaaaccattttgcaaggcttc < 1:416846‑M2/149‑80 (MQ=255) caacacaTCGTAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgcttgctcaaaccattttgcaaggcttcg < 1:980353‑M2/149‑81 (MQ=255) caacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcg < 1:128908‑M2/149‑81 (MQ=255) aacataTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcga > 2:958103‑M2/1‑68 (MQ=255) aacacaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGC < 1:366109‑M2/61‑1 (MQ=255) acaTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgc < 1:32880‑M2/149‑85 (MQ=255) acaTCGCAATTCATTGAATTTGCAGATTATAGAAGGCCGGATAAGGCGATTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgc < 1:629583‑M2/149‑85 (MQ=255) aTTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatg < 2:405030‑M2/149‑93 (MQ=255) aTTTATTGAACTAGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCTCATCCGGCtattctcttctcctgttgtgggcgctaaatgccggggggcctggaattattgattgctcaaacccttttgcaaggcttcgatgctcagtatg > 1:31181‑M2/1‑57 (MQ=255) ttATTGAATTTGCAGATTATGGAAGGCCGGGTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggt > 2:775435‑M2/1‑55 (MQ=255) aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcg < 1:577628‑M2/149‑97 (MQ=255) ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcga < 1:47358‑M2/149‑98 (MQ=255) ttGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcga > 1:521283‑M2/1‑52 (MQ=255) aaTTTGCAGAGTATGGAAGGCCGGATAAGGAATTTTCGCCGCATCCagcacttcactgctcctgataagggcgctaaataccgcgtcgactggaattattgattgctcaaaccattttgcaaggcttacatgctaagtatggtcagtag < 2:187220‑M2/149‑104 (MQ=255) ttGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctc > 2:326202‑M2/1‑46 (MQ=255) cATATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagtgcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 2:610460‑M2/1‑43 (MQ=255) cAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctcaacgaagagtggcatggaattattgagtgcttacatcggctttcaaggcttcgatgctcagtatggtcgattcctcgaa > 2:212054‑M2/1‑43 (MQ=255) cAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 2:649447‑M2/1‑43 (MQ=255) cAGATTATGCAAGGCCGGCAAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaa > 1:345947‑M2/1‑43 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt < 1:912199‑M2/149‑109 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt < 1:456035‑M2/149‑109 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt < 2:350583‑M2/149‑109 (MQ=255) gATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctccgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagt > 1:504276‑M2/1‑41 (MQ=255) aTTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggcagtattgattgcgcaaaccagtttgcaaggcttcgatgctcagtatggtcaattcctagaagtt < 2:712660‑M2/149‑110 (MQ=255) ttATTGAAGCCCGGATAAGGCCTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccatgttgcaaggcttcgatgctcagtatggtcgattcctcgaagtga > 1:289872‑M2/1‑39 (MQ=255) ttATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtga > 1:550621‑M2/1‑39 (MQ=255) tGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTc < 2:506495/130‑1 (MQ=255) gCCGGATAAGGCGTTTTCGCCGCATCCGGCcattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaacaattttgcaaggcttcgacgctcactttagtcgcttcctcaaagtgacctccggcg < 2:879274‑M2/149‑120 (MQ=255) aTAAGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcag > 1:374130‑M2/1‑25 (MQ=255) aGGCGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattcttgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacccccggtgcgcaccag < 2:142793‑M2/149‑128 (MQ=255) cGTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgt > 1:188294‑M2/1‑19 (MQ=255) ggtttccCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccggtgcgcagcagcgtt > 1:723514‑M2/3‑18 (MQ=255) gTTTTCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgcacagtatggtcgattccacgaagtgacctccggtgcgcagcagcgtt < 1:435703‑M2/149‑132 (MQ=255) ttttCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgacgcgtggcctggaagtattgattgctcaaaccattttgcaaggcttcgatgctcagtatggtcgattcctcgaagtgacctccgattcccagcagcgttc < 1:883325‑M2/149‑133 (MQ=255) ttCGCCGCATCCGGCaattctctgctcctgatgagggcgctaaatgccgcatagcctggaattattgattgctcaaaacatattccaaggcttcgatgctcaatatggtcgattcctcgacatgaactcccgtgcgcagccgggttttg < 2:273718‑M2/149‑135 (MQ=255) gccgcATCCGGCaattctctgctcctgatgagggcgctaaatgccgcgtggcctggaattattgattgctcaaaccattttgcaaggcttcgatgctc > 1:49296‑M2/1‑12 (MQ=255) | AGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATAT > NC_000913_3_hsa_pgi/4253899‑4254192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |