New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	3908414 =	NA (NA)	5 (0.100)	5/242	NT	9.1%	noncoding (28/64 nt)	REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913_3_hsa_pgi	= 4614382	50 (1.050)					noncoding (98/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences

TGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCAT  >  NC_000913_3_hsa_pgi/4614234‑4614515                                                                                                                                                     |                                                                                                                                      tGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGACGa                                                                                                                                       >  1:475674/1‑149 (MQ=255)    gaTTGCGCAAACGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCTTCTTATCATGCCTACAGGTTTGTGCCGAacc                                                                                                                                    <  1:978681‑M2/149‑4 (MQ=255)           cAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccataagac                                                                                                                             <  1:767101‑M2/149‑11 (MQ=255)              gCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccgtaggccgga                                                                                                                          >  1:291568‑M2/1‑136 (MQ=255)               ggtggCTTAATAACTCGTATACGTTGTTGAACGTGGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGAt                                                                                                                         <  2:55330/145‑1 (MQ=255)                gTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACCGGTTTGTGCCGAACCGTAGGCCGGATa                                                                                                                        >  2:84482/1‑149 (MQ=255)                  tGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAg                                                                                                                      <  1:612223/149‑1 (MQ=255)                  tGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAg                                                                                                                      <  1:753078/149‑1 (MQ=255)                  tGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAg                                                                                                                      <  1:946809/149‑1 (MQ=255)                  tGCTTAATAAAATCTTTACGTTGTTTAACTTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGAAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAg                                                                                                                      <  1:437014/149‑1 (MQ=17)                   gattAATAACACGTATACGTGGTTTAACGGGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAgg                                                                                                                     <  1:258088/147‑1 (MQ=255)                    cTTAATAACACGTATACGTTGTTTCACAAGACTGATGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGCTTGTGCCGAACCGTAGGCCGGATAAgac                                                                                                                    >  1:241998/1‑147 (MQ=17)                     ttAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGTGACGCTTAACCCGTCTTATCATGCCTACAGGTTTGTGCCGAaccctaggccgtgtcaggcg                                                                                                                   <  2:684831‑M2/149‑21 (MQ=255)                          aaCACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccgtaggccggatcaggcgtttcc                                                                                                              <  2:773864‑M2/149‑26 (MQ=255)                            ctcggataCGTTGTGTAACGCGCGTTAGGCCGAATAAGGCGTTCACGCCGGATCGGGCAGTTGGCGGACAATGCCTGTTGCGGCGCTTAACGCGTCTTATCATGCCTACCGGTTTGTGCCGAACCGTAGGACGGATAAGGCGTTAAcgc                                                                                                            <  2:87476/144‑1 (MQ=14)                             aggTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGCCTGATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgcc                                                                                                           <  1:789250/147‑1 (MQ=255)                                 ataCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATTCCTACAGGTTTGTGCCGAACCATAGGACGGATACAGCGTTCACACTGCag                                                                                                       >  1:433387/1‑148 (MQ=17)                                   aCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                                                                     >  2:364339/1‑149 (MQ=255)                                     gttgttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTATGACGAACCTTAGGCCGGATAAGGCGGTCACGCCGCAACCgg                                                                                                   >  1:185648/1‑149 (MQ=17)                                        gttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAAGCGTTCACGCCGCATCCGGCac                                                                                                >  1:449187/1‑148 (MQ=255)                                         tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccgtaggccggatcaggcgttccccccccatcccgccgt                                                                                               <  2:688246‑M2/149‑41 (MQ=255)                                                tcacGTAGCCCGGATAAGTCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGca                                                                                        <  1:207104/146‑1 (MQ=255)                                                tGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCTGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTAGCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGca                                                                                        <  2:345843/149‑1 (MQ=255)                                                tGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGca                                                                                        <  1:539523/149‑1 (MQ=255)                                                  ccGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACCCCGCATCCGGCAGTTGGCGcaca                                                                                      >  2:634495/1‑149 (MQ=255)                                                   cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGACTGTGCCAAACCGTAGGCCGGCTAAGGCGTTCACGCCGCATCCGGCAGTTGACGCACaa                                                                                     >  1:659076/1‑149 (MQ=14)                                                    gTAGGCCGGATAAGGCGTTCACGCGGCATCCGGCAGTTGGCGAACAATGCCTGATGCGACGCTTAACGCGTCTTATTATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAAt                                                                                    <  2:613557/149‑1 (MQ=255)                                                    gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAAt                                                                                    >  1:799943/1‑149 (MQ=255)                                                      aGGCCGGATAAGGCGTTCACGCCGCATCCGGGAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGc                                                                                  <  1:467665/149‑1 (MQ=255)                                                      aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGc                                                                                  <  1:55642/149‑1 (MQ=255)                                                       ggCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGcc                                                                                 <  2:799943/149‑1 (MQ=255)                                                        gCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCt                                                                                >  1:211398/1‑149 (MQ=255)                                                           gtaTAAGGCGTTCACGCCGTAGCCGGTAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGAt                                                                             <  1:723393/147‑1 (MQ=255)                                                            gATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTTATGTGACTCTTAACGCGTCTTATCATGCCGACAGGTGTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATg                                                                            <  1:268643/149‑1 (MQ=14)                                                            gATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGATTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGCTGGCGCACAATGACTGATg                                                                            >  1:960816/1‑149 (MQ=255)                                                               aaGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGa                                                                         <  1:579055/149‑1 (MQ=255)                                                                aGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGAc                                                                        <  1:215187/149‑1 (MQ=255)                                                                  gCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCAGCCGGCAGTTGGCGCAGAATGGCTGTTGctcttc                                                                      >  1:572590/1‑144 (MQ=14)                                                                     ttCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTg                                                                   >  2:852562/1‑149 (MQ=255)                                                                      tCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATTCGACCCTGAACGCGTCTTATCATCCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTga                                                                  <  2:678662/149‑2 (MQ=255)                                                                         cgccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGCGTAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATTCCTTATGCGCCGCTTGTcgc                                                               >  2:162373/1‑149 (MQ=14)                                                                                 ccGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATc                                                       <  1:600415/149‑1 (MQ=255)                                                                                  cGGTAGTTGGCGCACAATGCCTGACGCGACGCTTAGCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCa                                                      <  1:21027/149‑1 (MQ=255)                                                                                  cGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCCAAATGCCTGTACCGCCGCTTGTCGCGGCTTATCa                                                      >  2:836849/1‑149 (MQ=14)                                                                                   ggCAGTTGGCGCACGATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAt                                                     >  1:868593/1‑149 (MQ=255)                                                                                   ggCAGTTGGCGCACGATGCCTGATACGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAt                                                     >  1:868229/1‑149 (MQ=255)                                                                                   ggCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATCCGACGCTTGTCGCCTCTTATCac                                                     >  2:572739/1‑148 (MQ=255)                                                                                       gTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccgtaggccggatcaggcgttcacgccgcatccggcaaagtgttaaccgtgtacagagtcaaaaaggcgctcggtcggtcccctc                                                 <  2:9480‑M2/149‑87 (MQ=255)                                                                                         tGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTAc                                               <  1:364339/149‑1 (MQ=255)                                                                                         tGGCACACAATGCCTGATGCGACGCTTAACGCGGCTTATCATGCTTACAGGTTTGTACCGAACCGTAGGCCGGATAAGGCGTTCACGCCCCATCCGGCATATGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTAc                                               <  2:920726/149‑1 (MQ=14)                                                                                             gcACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGCTGGCGCACAATGCCTGAGGACACGCTTGTAGCGTCTTATCATGCCTAAAAga                                           >  1:354544/1‑148 (MQ=14)                                                                                                       tGATGCGACGCTTAACGCGTCTTATAATGCCTACAGGTTTGTGCCGAACCGTAGACCGGATAAGGCGTTCACGCCGCATCCAGCAGTTGGAGCACAATGCCTGATGCGACGCTTGTCCCGTCTTATCATGCCTACCAGTCtgtcgccaa                                 >  2:155054/1‑143 (MQ=14)                                                                                                        ggtGCGACGTTTAACGCGTCTTTTAATGCCTACAGGTTTGTGTCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGCAGCGCCTTATCATGCCTACAAGTCTGTGCCGAAc                                <  1:492353/147‑1 (MQ=14)                                                                                                         aTGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACAAGTCTGTGCCGAAcc                               >  2:541431/1‑149 (MQ=38)                                                                                                            cGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTa                            <  1:162373/149‑1 (MQ=255)                                                                                                                gCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGACTGATGCGACGCTTGTCGCGTCTTATCATGCCTACACGTCTCTGCCGAACAGTAGAcc                        >  2:904051/1‑149 (MQ=14)                                                                                                                 cTTAACGCGTTTTATCATGCCTACCGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCCGCAGTTGGCGCACAATGCCTGATGCGACGCTTGGCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCg                       <  1:738607/149‑1 (MQ=255)                                                                                                                   tAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAaccgtaggccggatcaggcgttcacgccgcatccggcaaagtgttaaccgtgtacagagtcaaaaaggcgctcggtcggtcccctcgcccctctggggagagggttagggtgag                     >  1:9480‑M2/1‑35 (MQ=255)                                                                                                                       gcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATTCGACGGTTGTCGCGGCTTATCATGCCTACAAGTCTGTGCCGAAACGTGCGCCggttgag                 >  2:303937/1‑144 (MQ=11)                                                                                                                       gcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAg                 <  1:506195/149‑1 (MQ=255)                                                                                                                          tgttAACATGGTTACGGGTGTTTACCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCg              <  2:686857/147‑1 (MQ=14)                                                                                                                                cATGCCTGCCGGTTTGTGCCGCTACGTAGTCCTGATAAGGCGTTCACGCCGCAGCCGGCAGGTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcg        <  2:915438/149‑1 (MQ=14)                                                                                                                                cATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcg        <  2:475674/149‑1 (MQ=255)                                                                                                                                 aTGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAtgc       >  1:570865/1‑149 (MQ=255)                                                                                                                                  tGCCTAAAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCAcgcc      <  1:398617/149‑1 (MQ=255)                                                                                                                                      tACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCAGATCGGACGCGCGCCGCGTCTTACCCCGCCCACAAGTGTCTACCGAGCCGTCCGCCGGATGCTGCGTTCACGACGCAt  >  1:88738/1‑149 (MQ=9)                                                                                                                                      tACAGGTTTGTGCCGAACCGTAGGCCAAATAAGTCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCACAt  >  1:493204/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                      TGAGATTGCGCAAGCGTTGCTTAATAACACGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCAT  >  NC_000913_3_hsa_pgi/4614234‑4614515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.