Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_KO_pgi 4233718 4233884 167 115 [113] [111] 120 lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein

Only 100 of 115 total aligned reads displayed.

AGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAGGTG  >  NC_000913_3_KO_pgi/4233618‑4233761
                                                                                                   |                                            
agtTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATc                                              >  1:468343/1‑100 (MQ=255)
  ttCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCtt                                            <  1:3470473/100‑1 (MQ=255)
   tCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCtt                                            >  2:4563250/1‑99 (MQ=255)
   tCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           >  1:3266381/1‑100 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCTCTACAATCTTc                                           >  2:3318796/1‑99 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCtt                                            <  2:609928/98‑1 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCtt                                            <  2:1049855/98‑1 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           >  1:667592/1‑99 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           >  1:3890463/1‑99 (MQ=255)
    cAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATGACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCtt                                            <  2:4863003/98‑1 (MQ=255)
     aGCTAATAAATGGTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAGAACCATCACATTGTTCTGTGACTGGCGCTACAATCTTcc                                          <  1:4600781/99‑1 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTcn                                          <  1:590442/99‑2 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           <  2:1175034/98‑1 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           >  2:2339781/1‑98 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           <  2:2774224/98‑1 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           <  2:2774575/98‑1 (MQ=255)
     aGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTCTTCTGTGACTGGCGCTACAATCTTc                                           >  2:4420020/1‑98 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTcc                                          >  2:3036054/1‑98 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTc                                           >  2:3169017/1‑97 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCa                                         >  1:459650/1‑99 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCa                                         >  1:237723/1‑99 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCa                                         >  1:727589/1‑99 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCa                                         >  1:4471629/1‑99 (MQ=255)
      gCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTATGACTGGCGCTACAATCTTCCa                                         >  1:4737791/1‑99 (MQ=255)
      gCTAATAAATGCTTCACGGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCaa                                        <  1:4923093/100‑1 (MQ=255)
       cTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCaaa                                       <  1:2670957/100‑1 (MQ=255)
          ataaATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGt                                     >  1:3041234/1‑99 (MQ=255)
          ataaATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGt                                     <  2:1104936/99‑1 (MQ=255)
          ataaATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGt                                     >  2:1119554/1‑99 (MQ=255)
          ataaATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTc                                    <  1:108183/100‑1 (MQ=255)
          ataaATGCTTCACCGCGCTAAGGGTTTACACTCAACATTACGCTACCCGCACTAAAACCATCACCTTCTCCTGTGACTGGCGCCACAATCTTCCACAGt                                     >  2:802641/1‑99 (MQ=255)
            aaaTGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTca                                   >  2:2655243/1‑99 (MQ=255)
             aaTGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTcac                                  >  1:1914088/1‑99 (MQ=255)
             aaTGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTcac                                  <  1:1425033/99‑1 (MQ=255)
              aTGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTcac                                  >  2:1928476/1‑98 (MQ=255)
              aTGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTcac                                  >  1:2592854/1‑98 (MQ=255)
                gCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAAtt                              >  1:1541512/1‑100 (MQ=255)
                 cTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtc                             >  1:2360778/1‑100 (MQ=255)
                 cTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtc                             >  1:2796042/1‑100 (MQ=255)
                 cTTCACAGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtc                             <  1:3964029/100‑1 (MQ=255)
                   tCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtct                            >  1:1133197/1‑99 (MQ=255)
                   tCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtct                            >  1:3096341/1‑99 (MQ=255)
                    cACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtctc                           >  1:4117285/1‑99 (MQ=255)
                    cACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtct                            <  2:760835/98‑1 (MQ=255)
                     aCTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATtctc                           >  2:107918/1‑98 (MQ=255)
                      cTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCaa                         >  1:1353459/1‑99 (MQ=255)
                        gcgcTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAAt                      >  1:2714479/1‑100 (MQ=255)
                        gcgcTAAGGGTTTACACTCAACATTACGCTAACGACACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCaa                         >  2:3491905/1‑97 (MQ=255)
                         cgcTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCaaaa                       <  1:4480585/98‑1 (MQ=255)
                         cgcTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCaaaa                       <  1:3725310/98‑1 (MQ=255)
                          gcTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTACTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAAt                      >  2:4841138/1‑98 (MQ=255)
                           cTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAAt                      >  2:11533/1‑97 (MQ=255)
                           cTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAAt                      >  2:3991248/1‑97 (MQ=255)
                           cTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAAt                      >  2:3919832/1‑97 (MQ=255)
                              aGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 <  2:4662752/99‑1 (MQ=255)
                              aGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 <  2:666186/99‑1 (MQ=255)
                              aGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 <  2:3073628/99‑1 (MQ=255)
                              aGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCag                   >  2:2730220/1‑97 (MQ=255)
                              aGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCag                   >  2:1713793/1‑97 (MQ=255)
                               gggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 >  1:3448593/1‑98 (MQ=255)
                               gggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 >  1:4467025/1‑98 (MQ=255)
                               gggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 >  1:3448540/1‑98 (MQ=255)
                                ggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaaga               <  2:4945577/99‑1 (MQ=255)
                                ggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaaga               <  2:2829804/99‑1 (MQ=255)
                                ggTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCagaa                 >  1:3999461/1‑97 (MQ=255)
                                 gTTTACACCCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAagag              >  1:2296728/1‑99 (MQ=255)
                                  tttACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAagag              >  2:1076473/1‑98 (MQ=255)
                                  tttACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTa            <  1:2751552/100‑1 (MQ=255)
                                  tttACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTa            <  1:1248395/100‑1 (MQ=255)
                                  tttACACTCAACACTACGCTAACGGCACTAAAACCAGCACATTCTTCTGTTACAGGCGCTACAATCTCCCAAAGt                                     >  2:258108/1‑75 (MQ=255)
                                   ttACACTCAACATTACGCTAACGGCACTACAACCATCACATTTTTCTGTGACTGGCGCTCCAATCTTCCACAGTCACAATTCTCAAAATCAGAAGAGTa            >  2:736815/1‑99 (MQ=255)
                                   ttACACTCAACATTACGCTAACGGCACTAAAACCATCCCATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTa            >  2:3877940/1‑99 (MQ=255)
                                   ttACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTTTTTTTTTTTCGCTACAATCTTCCAAAATCACAATTCTCATAATCAGAAGAGTa            >  2:736081/1‑99 (MQ=255)
                                     acacTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTAtt          >  2:3751882/1‑99 (MQ=255)
                                      cacTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTAtt          <  2:4525383/98‑1 (MQ=255)
                                      cacTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTg         <  2:4259178/99‑1 (MQ=255)
                                      cacTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTg         <  2:1472181/99‑1 (MQ=255)
                                      cacTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGc        <  1:2388663/100‑1 (MQ=255)
                                       acTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGc        >  1:2832860/1‑99 (MQ=255)
                                       acTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGc        <  2:3603815/99‑1 (MQ=255)
                                        cTCAACATTACGCTAACGGCCCTAAAACCATCACATTTTTCTGTGACTGGCGCTACAAGCTTCCACAGTCACAATTCTCAAAAt                      >  2:4957711/1‑84 (MQ=255)
                                        cTCAACATTACGCTAACGGCCCTAAAACCATCACATTTTTCTGTGACTGGCGCTACAACCTTCCAAAGTCACAATTCTCAAAATCAGATGAGTATTGc        >  2:4957655/1‑98 (MQ=255)
                                        cTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGc        >  2:4394937/1‑98 (MQ=255)
                                        cTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCt       >  1:3891351/1‑99 (MQ=255)
                                         tCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGc        >  2:184044/1‑97 (MQ=255)
                                         tCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTCACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCt       >  2:2977112/1‑98 (MQ=255)
                                          cAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaat    >  1:555410/1‑98 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatg   <  1:1592942/100‑4 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaat    >  2:373605/1‑97 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaat    <  1:458880/99‑3 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaat    <  1:1395167/99‑3 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaat    <  2:3481227/99‑3 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaa     <  1:395958/98‑2 (MQ=255)
                                           aaCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTAGCGCTACAAACTTCCAAAGTCACAATTCTCAAAATCAGAagag              >  2:1529836/1‑89 (MQ=255)
                                            aCATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatga  <  1:2345259/100‑5 (MQ=255)
                                             cATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatga  <  2:389834/99‑5 (MQ=255)
                                             cATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatga  >  1:3951904/1‑95 (MQ=255)
                                             cATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatga  <  2:3140694/99‑5 (MQ=255)
                                             cATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTaatg   >  2:1880961/1‑95 (MQ=255)
                                                       aCGGCACTAAAACCATCACATTTTTCTTTGTCTTGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGtc            >  2:3196812/1‑78 (MQ=255)
                                                                                                   |                                            
AGTTCAGCTAATAAATGCTTCACTGCGCTAAGGGTTTACACTCAACATTACGCTAACGGCACTAAAACCATCACATTTTTCTGTGACTGGCGCTACAATCTTCCAAAGTCACAATTCTCAAAATCAGAAGAGTATTGCTAGGTG  >  NC_000913_3_KO_pgi/4233618‑4233761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑