New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_KO_pgi = 3003998110 (0.810)10 (0.090) 10/232 15.1 9.6% intergenic (+30/+10) xdhC/ygeV xanthine dehydrogenase, Fe‑S binding subunit/putative sigma‑54‑interacting transcriptional activator
?NC_000913_3_KO_pgi = 3003974 97 (0.860)intergenic (+6/+34) xdhC/ygeV xanthine dehydrogenase, Fe‑S binding subunit/putative sigma‑54‑interacting transcriptional activator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 110 total aligned reads displayed.

CACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCATCTCCTC  >  NC_000913_3_KO_pgi/3003850‑3004142
                                                                                                                                                    |                                                                                                                                                
cACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGAtt                                                                                                                                                 >  1:1071478/1‑150 (MQ=255)
cACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGAtt                                                                                                                                                 >  3:409787/1‑150 (MQ=255)
  cgcgAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCa                                                                                                                                               <  1:595374/150‑1 (MQ=255)
    cgAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACt                                                                                                                                             <  2:904745/150‑1 (MQ=255)
     gagaAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAGCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTg                                                                                                                                            <  1:129985/150‑1 (MQ=255)
     gagaAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTg                                                                                                                                            >  2:872980/1‑150 (MQ=255)
      agaAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGa                                                                                                                                           <  2:243572/150‑1 (MQ=255)
       gaAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAg                                                                                                                                          <  2:246625/150‑1 (MQ=255)
         aGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGTAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGt                                                                                                                                        <  2:1385683/150‑1 (MQ=255)
            cATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTAt                                                                                                                                     <  4:644179/150‑1 (MQ=255)
             aTTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTAtg                                                                                                                                    >  1:204087/1‑150 (MQ=255)
               tAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTAtgtg                                                                                                                                  >  1:1425669/1‑150 (MQ=255)
                 aCCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATCCAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGtt                                                                                                                                >  1:526594/1‑150 (MQ=255)
                   cATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTa                                                                                                                              >  4:696222/1‑150 (MQ=255)
                    aTTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTaa                                                                                                                             <  1:272416/150‑1 (MQ=255)
                    aTTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTaa                                                                                                                             >  4:540269/1‑150 (MQ=255)
                       aCGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGTTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTaacaa                                                                                                                          <  3:61651/150‑1 (MQ=255)
                         ggAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACt                                                                                                                        >  4:21798/1‑150 (MQ=255)
                         ggAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACt                                                                                                                        >  2:427503/1‑150 (MQ=255)
                         ggAAATGAGTCGCGTACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACt                                                                                                                        <  4:486474/150‑1 (MQ=255)
                                  tcgCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCt                                                                                                               >  1:725097/1‑150 (MQ=255)
                                  tcgCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCt                                                                                                               >  2:298719/1‑150 (MQ=255)
                                    gcgGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTa                                                                                                             >  1:611153/1‑150 (MQ=255)
                                    gcgGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTa                                                                                                             <  4:346958/150‑1 (MQ=255)
                                       gACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATc                                                                                                          <  1:427503/150‑1 (MQ=255)
                                       gACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATGGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAAGTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATc                                                                                                          >  1:718002/1‑150 (MQ=255)
                                          tGGCGGGAAATCTTTGTCGATGCACGGGGTATCAGATGATTGTAAATACTGTTCTGGATTGCGAGTATACGTAGTAAAAGGATTTCCGGCCTGAATTAAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTg                                                                                                       <  3:83510/150‑1 (MQ=255)
                                           ggCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGc                                                                                                      <  3:94731/150‑1 (MQ=255)
                                            gCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCg                                                                                                     >  4:32857/1‑150 (MQ=255)
                                                 aaaTCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGc                                                                                                      <  3:265759/144‑1 (MQ=255)
                                                 aaaTCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGc                                                                                                      >  4:265759/1‑144 (MQ=255)
                                                  aaTCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATagag                                                                                               <  3:439658/150‑1 (MQ=255)
                                                    tCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCg                                                                                             >  1:468879/1‑150 (MQ=255)
                                                    tCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCg                                                                                             >  2:112232/1‑150 (MQ=255)
                                                     cTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGACAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTAtgt                                                                                                                                   <  1:838986/111‑1 (MQ=255)
                                                     cTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTAtgt                                                                                                                                   >  2:838986/1‑111 (MQ=255)
                                                       ttGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAg                                                                                          >  2:411490/1‑150 (MQ=255)
                                                       ttGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATGCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAg                                                                                          <  2:1129470/150‑1 (MQ=255)
                                                           cGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCaac                                                                                      >  1:908102/1‑149 (MQ=255)
                                                            gCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATg                                                                                     >  2:1057027/1‑150 (MQ=255)
                                                             cTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGc                                                                                    <  2:43333/150‑1 (MQ=255)
                                                                 aCGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGAt                                                                                <  1:1041986/150‑1 (MQ=255)
                                                                   ggggTATCAGATGATTGAAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGc                                                                              <  2:1365161/150‑1 (MQ=255)
                                                                    gggTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGcc                                                                             >  2:855018/1‑150 (MQ=255)
                                                                     ggTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGccc                                                                            <  4:409787/150‑1 (MQ=255)
                                                                         tCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGtt                                                                        <  2:301231/150‑1 (MQ=255)
                                                                            gatgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTg                                                                                                       >  2:1031860/1‑116 (MQ=255)
                                                                            gatgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTg                                                                                                       <  1:1031860/116‑1 (MQ=255)
                                                                            gatgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcat                                                                     >  2:1162348/1‑150 (MQ=255)
                                                                            gatgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcat                                                                     >  2:78205/1‑150 (MQ=255)
                                                                             atgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcatc                                                                    <  3:605161/150‑1 (MQ=255)
                                                                             atgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcatc                                                                    <  4:712722/150‑1 (MQ=255)
                                                                             atgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcatc                                                                    >  3:457170/1‑150 (MQ=255)
                                                                             atgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcatc                                                                    <  4:335123/150‑1 (MQ=255)
                                                                              tgatTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTtcatca                                                                   <  3:540269/150‑1 (MQ=255)
                                                                                      aaTACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCTGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTg                                                           >  4:347133/1‑150 (MQ=255)
                                                                                          cAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGcttc                                                       <  1:1068383/150‑1 (MQ=255)
                                                                                           aGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGcttct                                                      <  4:652506/150‑1 (MQ=255)
                                                                                           aGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGcttct                                                      >  1:792986/1‑150 (MQ=255)
                                                                                             ttCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTg                                                    >  2:1239853/1‑150 (MQ=255)
                                                                                               ttGGAGTGCAAGAAAACGAAGTAAAAGGATACCCGGTCTGTGTTCAGGCCGTATTCATTGAGGTTATGTGCTTAACCACTCATATTTCTTATTCGTGAGAAAGGGCGTAGCAACGCCGGTGCCCATTCCATCAGCAACTTCGTCCTTGcc                                                  <  2:803682/149‑2 (MQ=255)
                                                                                                 ggATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGt                                                <  2:611153/150‑1 (MQ=255)
                                                                                                  gATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGtt                                               >  4:436241/1‑150 (MQ=255)
                                                                                                   aTTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGATTACCAACTCATCTTACTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCCTGCTGTTa                                              <  1:713727/150‑1 (MQ=255)
                                                                                                    ttGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACt                                                             >  1:1341416/1‑134 (MQ=255)
                                                                                                    ttGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACt                                                             <  2:1341416/134‑1 (MQ=255)
                                                                                                      gCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGa                                           <  3:243107/150‑1 (MQ=255)
                                                                                                       ggagaAAACGAAGTAAAAGGATCTCCGGCCTCAATTCAGGCCGGAGTCACTGAGGCTATGTGTTTAACAACTCATATTTCTTATTCTTGCGATCGATCGTCGCAATGCCGATGCCCAGTTCATCAGCAACTTGGTTCTTGCTGTCAtccc                                          >  2:723034/2‑147 (MQ=255)
                                                                                                       cGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGAc                                          <  4:875919/150‑1 (MQ=255)
                                                                                                       cGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGAc                                          >  2:69777/1‑150 (MQ=255)
                                                                                                         agaAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGt                                        >  2:758560/1‑150 (MQ=255)
                                                                                                         agaAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGt                                        >  4:587358/1‑150 (MQ=255)
                                                                                                           aaaaCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGa                                      >  2:822601/1‑150 (MQ=255)
                                                                                                            aaaCGTATTAAAAGGAGATCCGGTCTGAATCCAGGTCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCTATAGGGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGaa                                     <  2:526594/150‑1 (MQ=255)
                                                                                                            aaaCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGaa                                     >  2:373970/1‑150 (MQ=255)
                                                                                                             aaCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGcc                                                                             >  2:1352025/1‑109 (MQ=255)
                                                                                                             aaCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGcc                                                                             <  1:1352025/109‑1 (MQ=255)
                                                                                                             aaCGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGaaa                                    <  2:690064/150‑1 (MQ=255)
                                                                                                               cGAAGTAAAAGGATATCCGGCCTTAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAGCTCATATTTCTTAATCCTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAgc                                  <  2:1023979/150‑1 (MQ=255)
                                                                                                                gAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAgcg                                 >  1:662606/1‑150 (MQ=255)
                                                                                                                gAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAgcg                                 >  4:726711/1‑150 (MQ=255)
                                                                                                                 aaGTAAAAGGATATCCGGCCTGAATTCAGACCTGATTCACTGATGGTATGTGGTGAACAACTGATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAgcgc                                <  1:131466/150‑1 (MQ=255)
                                                                                                                  aGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGcc                               <  2:1188642/150‑1 (MQ=255)
                                                                                                                  aGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGcc                               >  1:1333823/1‑150 (MQ=255)
                                                                                                                      aaaGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTcgc                           >  1:1333760/1‑150 (MQ=255)
                                                                                                                       aaGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTcgcg                          >  2:723703/1‑150 (MQ=255)
                                                                                                                         ggATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGa                        >  1:621348/1‑150 (MQ=255)
                                                                                                                          tgaatCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGAt                       >  4:388289/4‑150 (MQ=255)
                                                                                                                          gATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGCTCCCCAGTTCATCAGCAACTTGCTTCTTGCTGGTATGACGTGAAAGCGCCTCGCGGAt                       >  4:475852/1‑150 (MQ=255)
                                                                                                                              tCCGGCCTGAATTCAGGCCGGATTCAATGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCCTCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCAtt                   >  1:351675/1‑150 (MQ=255)
                                                                                                                                  gCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCt               >  2:46969/1‑150 (MQ=255)
                                                                                                                                    cTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCttt             >  1:207075/1‑150 (MQ=255)
                                                                                                                                       aaTTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTcc          >  1:255596/1‑150 (MQ=255)
                                                                                                                                       aaTTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTcc          >  2:14663/1‑150 (MQ=255)
                                                                                                                                         ttCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCAt        >  4:249988/1‑150 (MQ=255)
                                                                                                                                              gCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCATctcct   >  3:480305/1‑150 (MQ=255)
                                                                                                                                               ccGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCATctcctc  >  4:283111/1‑150 (MQ=255)
                                                                                                                                               ccGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCATctcctc  >  1:254322/1‑150 (MQ=255)
                                                                                                                                                 ggATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGcc                                                                             <  1:200778/73‑1 (MQ=255)
                                                                                                                                                 ggATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGcc                                                                             >  2:200778/1‑73 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
CACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAAAAGGATATCCGGCCTGAATTCAGGCCGGATTCACTGAGGTTATGTGTTTAACAACTCATATTTCTTAATCTTGCGATAGAGCGTAGCAATGCCGATGCCCAGTTCATCAGCAACTTGCTTCTTGCTGTTATGACGTGAAAGCGCCTCGCGGATCATTTGCTTTTCCATCTCCTC  >  NC_000913_3_KO_pgi/3003850‑3004142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.