New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_KO_pgi	3392261 =	58 (1.490)	9 (0.240)	5/270	4.6	13.9%	noncoding (186/308 nt)	REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences	REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences
	?	NC_000913_3_KO_pgi	= 4294460	NA (NA)					noncoding (192/600 nt)	RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites	RIP321 (repetitive extragenic palindromic) element; contains 11 REP sequences and 4 IHF sites
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTT  >  NC_000913_3_KO_pgi/3392117‑3392409                                                                                                                                                 |                                                                                                                                                     ttCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACTGCTGCCGGAt                                                                                                                                                  >  1:88932/1‑149 (MQ=37)  tCCTGTTTGTAGGACTGATAAGACGCACAGCGTAGCATCTGGCAACGGCTGTTGGTTGCGGGGAAAAGCCCTTACCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATg                                                                                                                                                 <  2:591776/149‑1 (MQ=11)      gTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATgcggc                                                                                                                                             >  1:659919/1‑149 (MQ=32)        ttGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGt                                                                                                                                           <  1:377789/149‑1 (MQ=32)          gTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTaa                                                                                                                                         >  2:518194/1‑149 (MQ=34)           tAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGTATGCGGCGTCAAAGCATCCTGTGACCTACGGTTCTGTGCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCAAGATGCGTCGTcaa                                                                                                                                        >  1:307196/1‑149 (MQ=11)              gCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGc                                                                                                                                     >  1:493074/1‑149 (MQ=35)              gCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAAAGCCTTATGCGACCTAAGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAAAGGATGGCGGATGCGGGGTAAACgg                                                                                                                                     >  1:263412/1‑148 (MQ=11)                tcgATAAGACGAACAGCGTGGCATTAGGCAACGGCGGTCGGATGCGGCGTAAACCCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCt                                                                                                                                   <  2:163505/147‑1 (MQ=11)                cTGATAAGACGCACAGCGTCGCATTATGCAACGTCTGTCGGATGCGGCGTAAACGCCCTCCCCGCCCTCCGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACCGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCt                                                                                                                                   <  2:679885/149‑1 (MQ=11)                      aGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACCACGTCGCATCAGGCAACGGCTACCGGATGCTGCCTAAGCGCCTAATcct                                                                                                                             >  2:295094/1‑148 (MQ=11)                       gACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGa                                                                                                                            >  2:455689/1‑149 (MQ=38)                       gACGCAACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGa                                                                                                                            <  2:412898/149‑1 (MQ=255)                              aGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACgg                                                                                                                     <  1:424190/149‑1 (MQ=38)                               ggggcGCATCAGGCAACGGCTGTCGGAGGGGGCGTAAACGCCTTATCCGACCTAGGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGt                                                                                                                    <  2:263931/145‑1 (MQ=255)                                     cATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAAGGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTCCGGTTGTGtt                                                                                                              >  1:609440/1‑149 (MQ=255)                                      aTCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCCTATCCGACCTACGGTTATGTTc                                                                                                             >  2:246811/1‑149 (MQ=17)                                       ctagggcaCGGCCGGCGGTCGCGGCGTAACCGCCTTATCCGCCCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCACCAGCGAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTcc                                                                                                            <  1:310452/142‑1 (MQ=11)                                          ggCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCTTATCCGACCTAAGGTTATGTTCCggc                                                                                                         >  2:678314/1‑147 (MQ=16)                                           gCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGttt                                                                                                        <  1:465896/149‑1 (MQ=255)                                              aCGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTa                                                                                                     <  1:684747/149‑1 (MQ=255)                                                   tGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTAAGGTTTTGTCCCTTTCGTATGCCt                                                                                                >  2:514935/1‑149 (MQ=14)                                                     tgggATGCGGCGTAAAACCCTTATCCGACCTACGGTTAGTTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGa                                                                                              <  2:571959/147‑1 (MQ=255)                                                     ccGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGa                                                                                              <  1:408534/148‑1 (MQ=255)                                                       ggATGTGGGGGAAAGGCCTTACCTGACCTAGGGTTATGTCCCGGTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGAGTAAACGCCTTATCCAACCTACGGTTATGTTCCGTCTGTAGGCCTGATa                                                                                            <  2:64201/149‑1 (MQ=14)                                                             ggcgTTACCGCCTTATCCGGCCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGc                                                                                      <  2:88932/149‑1 (MQ=255)                                                                    actccTTACTCGATCTACGTGTGTGTCCCGTTTGGAGGCCTGATAAGACCAACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAACCGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGt                                                                               <  1:375044/146‑1 (MQ=11)                                                                     cGCTTTATCCGCCTTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTc                                                                              <  2:669928/149‑1 (MQ=255)                                                                                aCCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCaa                                                                   <  1:404286/149‑1 (MQ=37)                                                                                 cttACGGTTTTGTTTCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAAc                                                                  <  1:540194/147‑1 (MQ=255)                                                                                  taaCGGTTCGGTCCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACg                                                                 <  1:423059/147‑1 (MQ=255)                                                                                   tACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACgg                                                                >  1:100519/1‑149 (MQ=37)                                                                                        tatttttCCGTTTGTAGGCCTGATAAGACGCACAGCGGCGCATCAGGCAACGGCTGCCGGAGGCGGCGTAAACGCCTTATCCGACCGACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGcc                                                           <  2:45772/144‑1 (MQ=255)                                                                                            gTTCCGTTTGTAGGCCTGATAAGACTCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCCAAGGGTTGCATCAGGCAACGGCTGCTGGAt                                                       <  1:514935/149‑1 (MQ=11)                                                                                            gTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGCCGCATCAGGCACCGGCTGCCGGag                                                       >  1:347697/1‑148 (MQ=255)                                                                                              ccggTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATgc                                                     >  1:541139/4‑149 (MQ=11)                                                                                                       aGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAAc                                            <  1:177695/149‑1 (MQ=35)                                                                                                         gCCTGATACGACGCACAGCGTCGCAGCAGGCAACGGCTGCCGGAGGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGc                                          <  1:178290/149‑1 (MQ=255)                                                                                                         gCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAACACGCACAGCCTCGCATCAGGCAACGGCTGCCGGGTGCGGCGCGAAccc                                          >  2:205528/1‑147 (MQ=255)                                                                                                          ccTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGcc                                         <  1:518194/149‑1 (MQ=35)                                                                                                          ccTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGcc                                         <  1:3575/149‑1 (MQ=35)                                                                                                           cTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGGGAACGccc                                        >  1:231231/1‑149 (MQ=25)                                                                                                             gATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATgcggc                                                  <  1:423567/137‑1 (MQ=33)                                                                                                             gATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATgcggc                                                  >  2:423567/1‑137 (MQ=33)                                                                                                              aTAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGGTTGGAGGCCTGGTAAGACGCACAGGGTCGCATCGGGCGACGGCTGCCGGATGCGGCGTGGAGGCCCtct                                     >  2:448544/1‑147 (MQ=11)                                                                                                               tAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGTTAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCCTATc                                    >  2:137507/1‑149 (MQ=255)                                                                                                                aaGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGt                                                >  2:359459/1‑136 (MQ=33)                                                                                                                aaGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGt                                                <  1:359459/136‑1 (MQ=32)                                                                                                                   aCGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGAc                                >  2:443925/1‑149 (MQ=14)                                                                                                                         aGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACgg                          <  1:174062/149‑1 (MQ=38)                                                                                                                                 aTCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTc                  <  2:217605/149‑1 (MQ=38)                                                                                                                                 aTCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTc                  >  1:297210/1‑149 (MQ=38)                                                                                                                                  tCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGGTGCGGCGTGAACGCCCTATCCGACCTACGGTGATGTTCt                 >  1:245187/1‑149 (MQ=255)                                                                                                                                  gcAGTCAACGGCGGCCGGAGGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCt                 <  1:186756/148‑1 (MQ=255)                                                                                                                                   cAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTg                <  2:541139/149‑1 (MQ=40)                                                                                                                                   cAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTACCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTg                <  2:507327/149‑1 (MQ=255)                                                                                                                                         aCGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGt          <  1:448544/149‑1 (MQ=255)                                                                                                                                              tGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGcc     >  1:272376/1‑149 (MQ=255)                                                                                                                                                 cGGAGGCGGCTTAATCGCCTTATCCGACCTCCGGTTATGTCCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCttt  <  1:55460/149‑1 (MQ=14)                                                                                                                                                 |                                                                                                                                                     TTCCGGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCCGTTTGTAGGCCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTATGTTCTGGCTCGTTGGCCTTT  >  NC_000913_3_KO_pgi/3392117‑3392409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.