Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_pae_pgi526,7920AC34.5% 93.8 / 68.5 88S1178R (AGC→CGC) rhsDRhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
Reads supporting (aligned to +/- strand):  ref base A (25/32);  new base C (13/17);  total (39/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGG  >  NC_000913_3_pae_pgi/526646‑526938
                                                                                                                                                   |                                                                                                                                                  
ggCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGgcgc                                                                                                                                                  <  2:444920/149‑1 (MQ=255)
  cTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATGCGGCGTGGcgcgg                                                                                                                                                >  2:162266/1‑148 (MQ=255)
  cTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCCGGCGCTTATCCGCGAAGACGGCACTACGGCGTGgcgcgc                                                                                                                                                >  2:920107/1‑149 (MQ=255)
   ttGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGcgcg                                                                                                                                               <  1:541851/149‑1 (MQ=255)
     gcggattGCGGGCTGACGGTCGTGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGa                                                                                                                                             <  2:242326/143‑1 (MQ=11)
       gcAATGCGGGCTGAGGGTGGAGCAACTGGCCAGAACGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGagt                                                                                                                                           <  2:353582/149‑3 (MQ=11)
            gCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatgat                                                                                                                                      <  2:561017/149‑1 (MQ=255)
            gCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatgat                                                                                                                                      <  1:736558/149‑1 (MQ=255)
                 cTGACGGTGGAGCAACTGGCCAGACAGGGGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATg                                                                                                                                 <  1:243434/149‑1 (MQ=255)
                  tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATgg                                                                                                                                >  1:547783/1‑149 (MQ=255)
                  tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATgg                                                                                                                                <  1:58706/149‑1 (MQ=255)
                  tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATgg                                                                                                                                <  1:735312/149‑1 (MQ=255)
                   gACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATggg                                                                                                                               <  1:482670/149‑1 (MQ=255)
                   gACGGTGGAGCAACGGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATggg                                                                                                                               <  1:768461/149‑1 (MQ=255)
                   gACGGCGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATggg                                                                                                                               <  1:308003/149‑1 (MQ=11)
                      ggTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCa                                                                                                                            >  1:766039/1‑149 (MQ=255)
                      ggTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCa                                                                                                                            >  1:276680/1‑149 (MQ=255)
                      ggTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCa                                                                                                                            >  1:300970/1‑149 (MQ=255)
                       gTGGAGCAACTGGCCAGACAGGTGGAGCCGGGATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCaa                                                                                                                           >  1:172874/1‑149 (MQ=255)
                       gTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATGCGGCGTGGCGCGGGGAGTATGATGAATGGGGCaa                                                                                                                           <  1:162266/149‑1 (MQ=11)
                       gTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatga                                                                                                                                       <  1:284654/137‑1 (MQ=255)
                       gTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatga                                                                                                                                       >  2:284654/1‑137 (MQ=255)
                       gTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCaa                                                                                                                           >  1:428415/1‑149 (MQ=255)
                        tGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAc                                                                                                                          <  1:315938/149‑1 (MQ=255)
                        tGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAAc                                                                                                                          <  1:11741/149‑1 (MQ=255)
                          gAGCAGCTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGGGTGGAGCGCGCAATCTGGTGAATGGGGCAACCa                                                                                                                        >  1:884129/1‑149 (MQ=17)
                          gAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCa                                                                                                                        <  1:530397/149‑1 (MQ=255)
                          gAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCCAAATCTGCAATACGGCGCGGCGCGGGGAGTATGATGAATGGGGCAACCa                                                                                                                        >  1:947248/1‑149 (MQ=11)
                            gCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGc                                                                                                                      <  1:682198/149‑1 (MQ=255)
                            gCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGc                                                                                                                      <  1:682214/149‑1 (MQ=255)
                             cAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCt                                                                                                                     <  1:372878/149‑1 (MQ=255)
                             cAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTAATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCt                                                                                                                     <  2:943432/149‑1 (MQ=11)
                              aaCTGGCCAGACAGGTGGAGACGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGATGGCGATTATGAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCtt                                                                                                                    <  2:328173/149‑1 (MQ=11)
                                  ggCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGCAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGCAAACGGCAACACGGCGTGGCGAGGGGAGCATGATGAATGGGGCGACCAGCTCAATg                                                                                                                >  2:63635/1‑149 (MQ=11)
                                   gCCAGAGAGGTGGAGCCGGAATACGCACCG‑GCGGGAAAGGCTCATCTTTATCCCTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGGGCGGAATATGATGAATGGGGCAACCAGCTTAATga                                                                                                               <  2:87999/149‑1 (MQ=17)
                                   gCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGACGACGGGAATAAGGCGTGGCGCGGGGGGTATGATGGATGGGGCAACCAGCTCAGTga                                                                                                               >  1:686965/1‑149 (MQ=11)
                                   gCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATga                                                                                                               <  1:538102/149‑1 (MQ=255)
                                   gCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCAGCTGCAGCTTATCCGGGAAGGTTACGATACGTCTTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATga                                                                                                               >  1:910435/1‑149 (MQ=11)
                                    ccAGACAGGTGGAGCCGGAATACACTCCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgag                                                                                                              <  1:956712/149‑1 (MQ=255)
                                     cAGAGAGGGGGAGCGGGAGTA‑ACCCCGTGCGCAAAAAGGTCATCTTGTTCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgagg                                                                                                             <  2:402305/149‑1 (MQ=14)
                                     cAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGCTGAAGGGGGCAAGCAGCTTAATgaga                                                                                                             >  1:466723/1‑148 (MQ=11)
                                     cAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgagg                                                                                                             >  1:17576/1‑149 (MQ=255)
                                        aCAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGgaga                                                                                                          >  1:188520/1‑149 (MQ=255)
                                        aCAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCCGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGACGAAGGGGGCAACCAGGCGAGTGAGgaga                                                                                                          >  2:97781/1‑149 (MQ=17)
                                          aGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAAc                                                                                                        <  2:276680/149‑1 (MQ=255)
                                          aGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAc                                                                                                        <  1:897250/149‑1 (MQ=255)
                                             tGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCGAAATGAGGAAAACCCg                                                                                                     >  1:85816/1‑149 (MQ=255)
                                                aGCCGGAATGCACACCG‑GCGCGAAAATCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGTCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcat                                                                                                  <  2:942737/149‑1 (MQ=11)
                                                aGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcat                                                                                                  <  1:231909/149‑1 (MQ=255)
                                                 gCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGACGGAGGCGAAACGGCGCGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcatc                                                                                                 >  2:833657/1‑149 (MQ=11)
                                                    ggAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCAtg                                                                                              <  2:188520/149‑1 (MQ=255)
                                                     gAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGCAGACGGCAAGACGGCGTGGGGCGGGGAGGATGATGAATGGGGATACCAGCTGAATGAGGAGAACAGGcatagact                                                                                             >  1:819435/1‑144 (MQ=11)
                                                         acacacCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTAt                                                                                         <  1:628705/149‑1 (MQ=255)
                                                           acacCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATga                                                                                                               <  2:308601/125‑1 (MQ=255)
                                                           acacCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATga                                                                                                               >  1:308601/1‑125 (MQ=255)
                                                           acacCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACC‑GGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGCAGCGCGGGATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAg                                                                                      >  1:863270/1‑149 (MQ=255)
                                                             acCG‑GCGCGAAAAGCTCTTTTTTAGCACTGCGACAACGGGGGAGTGCCGCTGGCGCTTATCAGCGAGGACGGCAATACGGCGTGGAGGGCGGAATATGATGAAGGGGGCAACCAGCTTTATGAGGAGAACCCGCATCATGTGTATCAGc                                                                                     <  2:160356/149‑1 (MQ=255)
                                                              ccG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcatcacctg                                                                                            <  1:423037/141‑5 (MQ=11)
                                                              ccG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcatcacctg                                                                                            >  2:423037/1‑137 (MQ=255)
                                                                  gcgcGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATAGGGGAACCCACGTAATGAGGAGGACCAGCAACAAATGTAGACGCCGTa                                                                                 >  2:588381/1‑149 (MQ=17)
                                                                    gcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTAcc                                                                               <  2:428415/149‑1 (MQ=255)
                                                                    gcgAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCAGGCGCTTATCAGCGAACACGGCAATACGGCGGGGCGCGCGGAGTATGCTGAATGGGGCAACCAGCTTAGGAAGCAGACCCCGAGTCACCTGCACCAGCCGtcgc                                                                               >  2:204838/1‑146 (MQ=255)
                                                                      gAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGt                                                                             >  1:224527/1‑149 (MQ=255)
                                                                             tCATCTTTATCCCTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACCGCGTGGAGCGCGGAGTATGATGAATGGGGCCACCACCTCACTGAGGAGAACCCGCAGCCTGTGTATCTGCCGTACCGTCTGCCAg                                                                      >  2:324496/1‑149 (MQ=17)
                                                                               aTCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGGGAAGACGGCGATCCGGCGTGAAGCGCGGAATATGATGAATGGGGCAAACAGCTTAATGAGGAGAACCCGCAACATGTGTATAAGCCGTACCGTCTGCCAgga                                                                    >  2:447517/1‑148 (MQ=18)
                                                                               aTCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgag                                                                                                              >  1:362140/1‑107 (MQ=255)
                                                                               aTCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgag                                                                                                              <  2:362140/107‑1 (MQ=11)
                                                                               aTCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAggg                                                                    <  1:523245/149‑1 (MQ=255)
                                                                                 cTTCATCACTGCGACCACCGCAGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGgca                                                                  <  1:466586/149‑1 (MQ=255)
                                                                                  gttATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACAGCGGGGAGCGCGGGATATGAAGAATGGGGCAACCAACTCAATGAGGAGAACCAGCAACATGTGTAACAGGAGAACAGACTGCCATGccag                                                                 >  2:257872/2‑149 (MQ=255)
                                                                                    tATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGAGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGgcagca                                                               <  1:128835/149‑1 (MQ=255)
                                                                                        aCTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGGAGACGGCAGTACGGCGCGGCGCGGGGAGTAAGCGGAAAGGGGCAACCAGCTCAACGAGGAGAACCCGCACCCGCCGCACCAACCGTACCGTCCGCCGGGGACGCAGCat                                                           >  2:875573/1‑149 (MQ=255)
                                                                                        aCTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCat                                                           >  1:348571/1‑149 (MQ=255)
                                                                                          tGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCACCAGCatga                                                         >  1:214889/1‑149 (MQ=255)
                                                                                           gcaccgaccGGTGACTGTCGCTGGTGCGTATCAGCGAAGACGGCAATACGGCGTGGAGCGAGGAATAGGATGAATGGGGCAACCAGCTGAATGAGGAGAACCCGCAGCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCattat                                                        <  2:555676/143‑1 (MQ=17)
                                                                                            cGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCatgatg                                                       <  1:785113/149‑1 (MQ=255)
                                                                                             gACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCAtgatga                                                      <  1:894079/149‑1 (MQ=255)
                                                                                               ccaccGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATatgatg                                                                                                                                     <  2:31347/68‑1 (MQ=255)
                                                                                               ccaccGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATatgatg                                                                                                                                     >  1:31347/1‑68 (MQ=255)
                                                                                                caccGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGa                                                   >  1:913192/1‑149 (MQ=255)
                                                                                                 accGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCAGCCAGGGCAGCCGCATGATGCGGaa                                                  >  2:513882/1‑149 (MQ=255)
                                                                                                   cGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTTTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGACGAGGAATc                                                >  2:82702/1‑149 (MQ=255)
                                                                                                       gACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGGGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAggg                                            <  1:206490/149‑1 (MQ=255)
                                                                                                        aCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCat                                                           >  1:380006/1‑133 (MQ=255)
                                                                                                        aCTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCat                                                           <  2:380006/133‑1 (MQ=255)
                                                                                                         cTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGACGATGGTGAATGGGGAAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCt                                          >  2:720658/1‑149 (MQ=255)
                                                                                                                   cgcTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAAc                                <  2:814464/149‑1 (MQ=255)
                                                                                                                                 gACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGtacta                  <  2:172874/149‑1 (MQ=255)
                                                                                                                                     gCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACggt              >  2:21035/1‑147 (MQ=255)
                                                                                                                                      cAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATc             <  1:539690/149‑1 (MQ=255)
                                                                                                                                                 ggAGCGGGGAATATGATGATTGGGGCACCCAGCTTAATGAGGAGAACCGGCATCATGTGTATGAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGGATCAGGGCGGTACTATAACCGTCACCGGTACTACGATCCGTTGCGgggg  <  2:127402/149‑1 (MQ=17)
                                                                                                                                                   |                                                                                                                                                  
GGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCG‑GCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGG  >  NC_000913_3_pae_pgi/526646‑526938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑