New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 1066842	39 (0.970)	8 (0.210)	8/260	3.6	17.9%	intergenic (+16/+22)	agp/yccJ	glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein
	?	NC_000913_3_pae_pgi	= 1066847	37 (0.990)					intergenic (+21/+17)	agp/yccJ	glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/1066688‑1066842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcccccgcTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGC  <  NC_000913_3_pae_pgi/1066847‑1066704                                                                                                                                                                                                                                                                                                             GTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGTTTTCTGCCAGATGGATACGTTTGATAGCGTGTTGAGTGAAGCGGTGAACTCACAGATTACTC                                                                                                                                                        >  1:686477/1‑149     CGTAATGCCGATGCGTTACCCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAGCTCCCCC                                                                                                                                                    <  2:404649/149‑1      GTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGCAATAACAGAAAACTCCCCCG                                                                                                                                                   >  1:631634/1‑149                  CGTTAACCCTGCAGGCCTCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACACCCCCGTTTCTCGCGGGG                                                                                                                                       <  1:443407/149‑1                      acCCCCGCAGGCGCCTGCGCAGCCTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTTACAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGT                                                                                                                                   <  1:71696/147‑1                                    CTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAA                                                                                                                                                           <  1:630118/111‑1                                    CTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAA                                                                                                                                                           >  2:630118/1‑111                                                    GCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACAC                                                                                                     >  2:365388/1‑149                                                               GCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACT                                                                                          <  1:365388/149‑1                                                                                             GCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTT                                                                                                                                <  1:304809/81‑1                                                                                             GCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTT                                                                                                                                >  2:304809/1‑81                                                                                                          GTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTA                                                                                                                          >  1:464265/1‑74                                                                                                          GTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTA                                                                                                                          <  2:464265/74‑1                                                                                                                                                    TCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAA     <  1:597923/149‑1                                                                                                                                                       CCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGC  >  1:101402/1‑149                                                                                                                                                                                                                                                                                                             GTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/1066688‑1066842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcccccgcTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGC  <  NC_000913_3_pae_pgi/1066847‑1066704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.