| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,399,449 | G→T | S26R (AGC→AGA) | fnr ← | oxygen‑sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,399,449 | 0 | G | T | 95.0% | 339.3 / 7.3 | 100 | S26R (AGC→AGA) | fnr | oxygen‑sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (3/2); new base T (44/51); total (47/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
GTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTC > NC_000913_3_pae_pgi/1399303‑1399590 | gTACCGGCGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAgctgtctg < 4:723654/150‑1 (MQ=255)gTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAgctgtctg > 4:645534/1‑150 (MQ=255) gAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGAtgctg < 2:56266/150‑1 (MQ=255) gAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGAtgctg < 1:514161/150‑1 (MQ=255) gATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATc < 3:497996/150‑1 (MQ=255) tGGCATAAGGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATCGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCt < 4:718229/150‑1 (MQ=255) tGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCt > 2:844950/1‑150 (MQ=255) ggCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTg < 1:1103796/150‑1 (MQ=255) cATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGc < 3:18563/150‑1 (MQ=255) aGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAgctgtctg < 2:461726/129‑1 (MQ=255) aGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAgctgtctg > 1:461726/1‑129 (MQ=255) aGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATgg < 4:149039/150‑1 (MQ=255) aGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATgg > 3:331521/1‑150 (MQ=255) gCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGa < 1:470737/150‑1 (MQ=255) gATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATa < 4:55909/150‑1 (MQ=255) tttAAGCCCAGCACCATCCGTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCACTCCTGGCAATGGATAGc < 4:416655/150‑1 (MQ=255) aGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACaa > 1:116818/1‑150 (MQ=255) ttCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAAcc > 1:291916/1‑150 (MQ=255) catcaCCAGCCTTAAACAGCGTCTGGCCTGTCTGAATAGGCTTCTTCCGCTCAATGATAGTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGc < 2:748564/150‑1 (MQ=255) atcaCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGcc > 4:130763/1‑150 (MQ=255) tcaCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGca > 1:79028/1‑141 (MQ=255) tcaCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGca < 2:79028/141‑1 (MQ=255) tcaCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCa < 1:288938/150‑1 (MQ=255) caCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAg > 3:705728/1‑150 (MQ=255) caCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAg < 1:138150/150‑1 (MQ=255) aCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGGTGCAATCCTGGCAATGGATAGCACAACCGCCAGa > 1:889563/1‑150 (MQ=255) aCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTg > 3:728909/1‑126 (MQ=255) aCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTg < 4:728909/126‑1 (MQ=255) aCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGa > 1:150814/1‑150 (MQ=255) aCCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCACTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGa < 2:1029388/150‑1 (MQ=255) cAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACt < 2:1053957/150‑1 (MQ=255) aGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATc < 3:616438/120‑1 (MQ=255) aGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATc > 4:616438/1‑120 (MQ=255) aGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTg < 3:172285/150‑1 (MQ=255) gCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTGGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAACCCTGGCAATGGATAGCACAACCGCCAGACTGa < 4:610227/150‑1 (MQ=255) aCAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGcc < 2:150814/150‑1 (MQ=255) aCAGCGTCTGGCCTTTCTGAATACGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGcc > 4:703282/1‑150 (MQ=255) aGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGt > 1:1116616/1‑150 (MQ=255) aGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGt > 3:203506/1‑150 (MQ=255) gCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGta < 3:43448/150‑1 (MQ=255) cTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAAt > 4:33159/1‑150 (MQ=255) gCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGa > 3:727974/1‑92 (MQ=255) gCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGa < 4:727974/92‑1 (MQ=255) gCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCg < 2:856602/150‑1 (MQ=255) gCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCg > 2:970146/1‑150 (MQ=255) ccTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGc > 2:576723/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCtt > 3:72418/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCtt > 4:279245/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCtt > 2:1201868/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAATGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCACCGTATAATTCGCtt > 2:302113/1‑150 (MQ=255) tttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCGCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCtt > 2:712889/1‑150 (MQ=255) ttCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCttt > 1:610759/1‑150 (MQ=255) aaTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGtata > 3:318135/1‑136 (MQ=255) aaTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGtata < 4:318135/136‑1 (MQ=255) aaTAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCgg < 2:542615/150‑1 (MQ=255) aGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGAt > 3:294990/1‑150 (MQ=255) ttcCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGt > 3:275832/1‑150 (MQ=255) cGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTg < 1:844950/150‑1 (MQ=255) cGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTg < 4:658465/150‑1 (MQ=255) gCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGc > 2:332701/1‑150 (MQ=255) aTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGTAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAg < 2:695406/150‑1 (MQ=255) aTGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAg < 1:970146/150‑1 (MQ=255) gATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTg < 2:595717/102‑1 (MQ=255) gATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTg > 1:595717/1‑102 (MQ=255) gATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGcc < 2:9581/150‑1 (MQ=255) tattatCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCCATCCTGGCAATGGATAGCACTACCGCCAGACTGAGTGCGCCGTATAATTCGCTTTTCCGGGCTCATAGGTCTGCTCATGCCGt < 2:500838/150‑1 (MQ=255) attatCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTa < 2:64971/150‑1 (MQ=255) aaGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGat < 1:215188/150‑1 (MQ=255) aaGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGat > 1:58269/1‑150 (MQ=255) aGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATa < 3:336824/126‑1 (MQ=255) aGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATa > 4:336824/1‑126 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAAt > 3:81813/1‑142 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATAttt > 3:8978/1‑150 (MQ=255) tGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATACTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATAttt < 2:863064/150‑1 (MQ=255) tGATCAAGCTCATCTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATAttt < 4:648502/150‑1 (MQ=255) cAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAGTGCGGCGTATAATTCGCTTTTCCGGGATCATAGGGCTGCTCAAGTCGTAATTGATATTTGTCa < 2:403633/150‑1 (MQ=255) cAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCa > 4:14638/1‑150 (MQ=255) aGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAAt > 3:347039/1‑150 (MQ=255) gCTCATGCTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAAtt > 2:1213341/1‑150 (MQ=255) cTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAAttt < 4:203506/150‑1 (MQ=255) tCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGc < 4:683229/127‑1 (MQ=255) tCATGTTCGTTGAGTGAGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGc > 3:683229/1‑127 (MQ=255) cATGTTCGTTGAGTGTGACCGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTa < 4:665023/150‑1 (MQ=255) cATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTa < 2:777419/150‑1 (MQ=255) aTGTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCGAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTaa < 2:844278/150‑1 (MQ=255) gTTCGTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACa > 2:445452/1‑150 (MQ=255) gTTGAGTGTGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCtt > 1:868829/1‑150 (MQ=255) gtgtGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAg > 4:51504/1‑150 (MQ=255) gtgtGAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAg < 4:705728/150‑1 (MQ=255) tgtgAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAgg < 1:576723/150‑1 (MQ=255) tgAACGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGa > 4:499587/1‑150 (MQ=255) aCGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGTGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCa > 1:164843/1‑150 (MQ=255) aCGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCa > 1:164908/1‑150 (MQ=255) cGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGt > 4:263009/1‑97 (MQ=255) cGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGt < 3:263009/97‑1 (MQ=255) cGGGATGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaa < 1:730497/150‑1 (MQ=255) aTGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCaagtaa < 4:275832/150‑1 (MQ=255) tGCAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGAaagtaag > 3:700745/1‑150 (MQ=255) cAAAGCTGTCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTc > 4:492201/1‑150 (MQ=255) aaaGCTGTCTGATGCTGCAATCCTGGCAATGGCTAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGc < 4:109624/71‑1 (MQ=255) | GTACCGGAGCGGATGGCATAAAGCGATTTAAGTTCATCACCAGCCTTAAACAGCGTCTGGCCTTTCTGAATAGGCTTCTTCCGCTCAATGATATTATCAAGCTGATCAAGCTCATGTTCGTTGAGTGTGAACGGGATGCAAAGCTGGCTGATGCTGCAATCCTGGCAATGGATAGCACAACCGCCAGACTGAATGCGCCGTATAATTCGCTTTTCCGGGATCATAGGTCTGCTCAAGCCGTAATTGATATTTGTCAATTTTAACATCTTTTTAGGGAGCAAGTAAGTC > NC_000913_3_pae_pgi/1399303‑1399590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |