| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 2,867,260 | T→G | N98H (AAC→CAC) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 2,867,260 | 0 | T | G | 99.3% | 986.6 / ‑2.3 | 282 | N98H (AAC→CAC) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base G (151/128); total (153/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
CGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTC > NC_000913_3_pae_pgi/2867116‑2867406 | cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGActct > 1:1528171/1‑150 (MQ=255) gTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACtctc < 4:759083/150‑1 (MQ=255) gTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACtctc < 1:793290/150‑1 (MQ=255) aTGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGa < 2:904066/150‑1 (MQ=255) ttGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGatca > 1:1569189/1‑150 (MQ=255) ttGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGatca > 3:611/1‑150 (MQ=255) gagaAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCACTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGatcatc > 2:638217/1‑150 (MQ=255) agaAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATcc > 4:876027/1‑150 (MQ=255) ggAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCggcggc < 3:967083/150‑1 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGgcggcg < 4:1124732/150‑1 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGgcggcg > 1:1919943/1‑150 (MQ=255) gAAACCACGTTCCGGGTCAAACTTCNCTACCGCGCGGANCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCACTTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGgcggcg > 3:1060285/1‑150 (MQ=255) ccACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGagag < 1:1828548/150‑1 (MQ=255) cACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCg < 2:2292210/131‑1 (MQ=255) cACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCg > 1:2292210/1‑131 (MQ=255) cACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAgg > 1:295291/1‑150 (MQ=255) cACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAgg > 3:355457/1‑150 (MQ=255) aCGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGagag > 3:1428157/1‑148 (MQ=255) gTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGa > 3:277383/1‑150 (MQ=255) gggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGAc < 4:681889/118‑1 (MQ=255) gggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACAtct > 2:302908/1‑150 (MQ=255) ggTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACAtctc < 1:516264/150‑1 (MQ=255) gTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTcc > 2:18248/1‑150 (MQ=255) cAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCAc < 1:679736/150‑1 (MQ=255) cAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCAc < 2:1005967/150‑1 (MQ=255) cAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCAc < 4:611/150‑1 (MQ=255) tctACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCcggcgg < 3:368805/123‑1 (MQ=255) tACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGcgcg > 3:441730/1‑150 (MQ=255) tACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGcgcg > 1:2001765/1‑150 (MQ=255) ccGCGCGGATCAGCCCCAGGTTGCCGTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAc < 3:1351597/150‑1 (MQ=255) ccGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAc < 3:572441/150‑1 (MQ=255) gcgcgGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGatc < 2:1349189/108‑1 (MQ=255) gcgcgGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCAc > 2:560679/1‑136 (MQ=255) cAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTgcgc < 2:178422/137‑1 (MQ=255) cAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTgcgc > 1:178422/1‑137 (MQ=255) aGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACCCGCAAAATaa < 4:285072/150‑1 (MQ=255) gCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTgcg > 2:2218198/1‑134 (MQ=255) ccccAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCACAATAAAc > 2:2004039/1‑150 (MQ=255) ccccAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAAc < 1:57321/150‑1 (MQ=255) ccAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAActt > 4:1153804/1‑150 (MQ=255) cAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATaaa > 2:516086/1‑146 (MQ=255) cAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAActtc < 3:649677/150‑1 (MQ=255) ttGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGTCTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCTAAATGAActtcttct < 4:1220194/150‑1 (MQ=255) ccTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCa < 3:1027235/117‑1 (MQ=255) ccTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCgg < 2:1569189/150‑1 (MQ=255) ccTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCgg > 1:1479824/1‑150 (MQ=255) ctctTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAActt > 4:1265823/1‑140 (MQ=255) tctTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGa > 4:1385/1‑103 (MQ=255) tctTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGcc > 2:1063479/1‑150 (MQ=255) ttCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGt < 3:120066/150‑1 (MQ=255) tCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGa < 1:2217850/79‑1 (MQ=255) cGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTa > 3:1184580/1‑150 (MQ=255) gATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGAc < 2:1918832/99‑1 (MQ=255) gATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTaa > 4:947013/1‑150 (MQ=255) gATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTaa > 2:1048211/1‑150 (MQ=255) ggTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtg < 3:863036/150‑1 (MQ=255) tCCAGCAACGCCAGACCACGATTGCCATAACGGCGGTCAATTTTTACCACCAGACGCAAGCGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCg < 2:1627477/139‑1 (MQ=255) tCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt > 1:1006211/1‑150 (MQ=255) tCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt < 1:319568/150‑1 (MQ=255) tCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt > 1:1039143/1‑150 (MQ=255) cAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt < 2:516719/148‑1 (MQ=255) aGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGAcg < 1:1323088/110‑1 (MQ=255) aGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGaa < 1:1647272/150‑1 (MQ=255) cAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCaaa < 3:1135830/114‑1 (MQ=255) gCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggtctggc < 4:395019/146‑6 (MQ=255) gCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCa < 2:231556/150‑1 (MQ=255) cAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAAt > 2:1121792/1‑150 (MQ=255) gACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt > 2:498873/1‑137 (MQ=255) gACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAgtggt < 1:498873/137‑1 (MQ=255) aCCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGActc < 2:1682057/52‑1 (MQ=255) aCCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGActc > 1:1682057/1‑52 (MQ=255) aCCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAAtctc > 2:521126/1‑150 (MQ=255) gATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCaa < 4:441730/150‑1 (MQ=255) aTAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAATGTAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAg > 3:1432314/1‑150 (MQ=255) aTAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAg > 1:463071/1‑150 (MQ=255) tAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGc > 1:2169646/1‑150 (MQ=255) tAACGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGc > 3:402048/1‑150 (MQ=255) aaCGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAActtcttctt < 1:2384485/105‑1 (MQ=255) aaCGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCt < 4:628431/150‑1 (MQ=255) aaCGGCGGGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCt < 2:1390304/150‑1 (MQ=255) cggcggGCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGa < 2:875771/150‑1 (MQ=255) cggcggGCAATTTTTACCACCAGACGCAAGTGACTCCCGATCACCCGGCGGCGACAGGCGACATCTCCACGCCGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTCACAGTGGTGAATAACCACTCTCACCAAGGTAAAGCTgc > 2:761188/1‑149 (MQ=255) ggggCAATTTTTACCACGAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTc < 2:1439832/149‑1 (MQ=255) ggCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAAc > 2:1231200/1‑90 (MQ=255) gCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTcgcg > 4:361963/1‑150 (MQ=255) gCAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTcgcg < 2:2159718/150‑1 (MQ=255) cAATTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTcgcgg > 1:931286/1‑149 (MQ=255) aaTTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTc > 1:1376789/1‑150 (MQ=255) aTTTTTACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTcc < 4:1429286/150‑1 (MQ=255) aTTTCTACCACCAGACGCAAGTCACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATACCCAATCTCACCAAGGTAAAGCTGAGTCGCGTcc < 4:1051022/150‑1 (MQ=255) tttttACCACCAGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGt > 1:1846642/1‑147 (MQ=255) tttACCACCAGACGCAAGGGACTCGCGATCGTCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTACTGCGGCCGTTAACAGTGGTGAATAACCATTCTCACCAAGGTAAAGCTGAGTCGTGTCCAac < 2:2373717/150‑1 (MQ=255) ccaccaGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAacacac < 1:1121792/150‑1 (MQ=255) accaGACGCAAGTGACTCTCGATCATCCGGCGGCGCGAGGCGACATCTCCACGCAGTGCGAGACGCGCAAAATAAACTTCTTCTTCGGCCGTTTACAGTGGTGAATAACCAATCTCACCAAGGGAAAGCTGAGTCGCGTCCATAACACGc > 4:180219/1‑150 (MQ=255) ccaGACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCt > 1:875973/1‑150 (MQ=255) gACGCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCtgtg > 2:1471942/1‑150 (MQ=255) gCAAGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCATCCAACACACGCTGTGTgg < 1:521126/150‑1 (MQ=255) aaGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCt < 1:638217/150‑1 (MQ=255) aaGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCt > 3:1260896/1‑150 (MQ=255) aGTGACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTc > 1:2032692/1‑150 (MQ=255) | CGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGCGCGACGCGCAAAATAAACTTCTTCTTCGGCCGTTAACAGTGGTGAATAACCAATCTCACCAAGGTAAAGCTGAGTCGCGTCCAACACACGCTGTGTGGCTC > NC_000913_3_pae_pgi/2867116‑2867406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |