| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_pae_pgi | 1,678,015 | Δ73 bp | intergenic (‑112/‑340) | pntA ← / → ydgH | pyridine nucleotide transhydrogenase, alpha subunit/DUF1471 family periplasmic protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_pgi | 1678015 | 1678087 | 73 | 18 [0] | [0] 18 | pntA/ydgH | pyridine nucleotide transhydrogenase, alpha subunit/DUF1471 family periplasmic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | = 1678014 | 0 (0.000) | 18 (1.040) | 15/272 | 0.3 | 100% | intergenic (‑111/‑413) | pntA/ydgH | pyridine nucleotide transhydrogenase, alpha subunit/DUF1471 family periplasmic protein |
| ? | NC_000913_3_pae_pgi | 1678088 = | 0 (0.000) | intergenic (‑185/‑339) | pntA/ydgH | pyridine nucleotide transhydrogenase, alpha subunit/DUF1471 family periplasmic protein | |||||
TGCCTGTGTCAGGAGCCACACAAGCTGCTCATGTACGAGCTAAATGTTACTCCGTTAAAATAAATTAGTAACAAACGCCCTATAACGTACTGAAAATTATGCCTGTGATCTAGCGCCAAAAATCAGTATTTCGGCGTGAACTCGCAAAATATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCGGCACGAATCACTACTTAACATTAAATTAACTTATACAATTCAGTTG > NC_000913_3_pae_pgi/1677939‑1678233 | tcattggttaaccgttctcttggtatgccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaact > 1:125369‑M2/150‑150 (MQ=255) ggttaaccgttctcttggtatgccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTaa > 1:169717‑M2/145‑150 (MQ=255) gttaaccgttctcttggtatgccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAAc > 1:158437‑M2/144‑150 (MQ=255) gttaaccgttctcttggtatgccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAAc > 1:194211‑M2/144‑150 (MQ=255) tcttggtatgccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGt < 3:88235‑M2/18‑1 (MQ=255) gccaattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTggg > 1:143135‑M2/124‑150 (MQ=255) aattcgcatgatattcccttccatcggttttattgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATa < 2:143135‑M2/30‑1 (MQ=255) ttgatgatggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATaa > 2:54425‑M2/89‑150 (MQ=255) ggtttgcctgtgtcaggagccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTc < 1:44542‑M2/70‑1 (MQ=255) gccacacaagctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACga < 2:169717‑M2/88‑1 (MQ=255) gctgctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGcc > 1:35417‑M2/54‑150 (MQ=255) ctcatgtacgagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCgg > 2:156431‑M2/50‑150 (MQ=255) gagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGt > 2:148788‑M2/41‑58 (MQ=255) gagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGt < 1:148788‑M2/18‑1 (MQ=255) gagctaaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCGGCACGAATCa < 1:54425‑M2/110‑1 (MQ=255) taaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAGCGAGACATCGCCCCGGCACGAATCactac < 2:194211‑M2/114‑1 (MQ=255) taaatgttactccgttaaaataaattagtaacaaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCGGCACGAATCactac < 2:158437‑M2/114‑1 (MQ=255) aaacTATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCGGCACGAATCACTACTTAACATTAAATTAACTTATACAATTCAGTTg > 1:83038‑M2/5‑150 (MQ=255) | TGCCTGTGTCAGGAGCCACACAAGCTGCTCATGTACGAGCTAAATGTTACTCCGTTAAAATAAATTAGTAACAAACGCCCTATAACGTACTGAAAATTATGCCTGTGATCTAGCGCCAAAAATCAGTATTTCGGCGTGAACTCGCAAAATATTAACGATTCAGCCGTGATAGTGGGATAAACACCTTAGAACGCCGGATAAAGACTGATAATTGTCTTCGACGGTCGGGTAAAACGAGACATCGCCCCGGCACGAATCACTACTTAACATTAAATTAACTTATACAATTCAGTTG > NC_000913_3_pae_pgi/1677939‑1678233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |