New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_pgi 1886815 =123 (1.340)6 (0.070) 6/260 11.6 5.4% intergenic (+5/+49) yeaX/rnd putative YeaWX dioxygenase beta subunit, reductase component/ribonuclease D
?NC_000913_3_pae_pgi 1886858 = 95 (1.120)intergenic (+48/+6) yeaX/rnd putative YeaWX dioxygenase beta subunit, reductase component/ribonuclease D
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 124 total aligned reads displayed.

TGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGT  >  NC_000913_3_pae_pgi/1886667‑1886963
                                                                                                                                                    |                                                                                                                                                    
tGCGGAACCTGGGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGc                                                                                                                                                      <  2:24513/149‑1 (MQ=255)
tGCGGAACCTGCGAAACTGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGc                                                                                                                                                      <  2:1558048/149‑1 (MQ=255)
tGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGc                                                                                                                                                      >  1:655511/1‑149 (MQ=255)
 gCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGcc                                                                                                                                                     <  2:211410/149‑1 (MQ=255)
  cGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCg                                                                                                                                                    >  1:928155/1‑149 (MQ=255)
      aCCTGCGAAACAGCAATAGTGGAAGGTGAAGCTGACCATCGGGAGCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGAATATTGATCTGTCGTTCGGGTGAGTGGGGGCAACGACTGGTGTTGGATTTGTAGTTTGCCGAAga                                                                                                                                                >  2:744861/1‑148 (MQ=255)
        cTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCg                                                                                                                                              >  1:904475/1‑149 (MQ=255)
         tGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCgg                                                                                                                                             >  1:855685/1‑149 (MQ=255)
           cGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAt                                                                                                                                           <  2:928155/149‑1 (MQ=255)
           cGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAt                                                                                                                                           >  2:433636/1‑149 (MQ=255)
              aaCAGCAATACTGGAAGGTGATTCTGGCCAGCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAtgtg                                                                                                                                        >  2:1591708/1‑149 (MQ=255)
               aCAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGATGCCGGATGTgg                                                                                                                                       <  1:990781/149‑1 (MQ=255)
                cAGCAATACTGGGAGGGGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGactgggc                                                                                                                                      <  1:885753/149‑7 (MQ=255)
                    aaTACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAAGCCCTGGTGTTGGGTTGGTAGTTTGCCGAAGCCGGATGTGGCGCTg                                                                                                                                  >  1:1502053/1‑149 (MQ=255)
                    aaTACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTg                                                                                                                                  >  1:919496/1‑149 (MQ=255)
                     aTACTGGAAGTTGAAGTTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGa                                                                                                                                 <  1:1255126/149‑1 (MQ=255)
                          ggAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAgcgcg                                                                                                                            >  1:4867/1‑149 (MQ=255)
                           gAAGGTGAAGCTGTCCATAGGGATCAATATTTTAGCGATGAAGAGCGTGACAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCCAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAgcgcgc                                                                                                                           <  2:216239/149‑1 (MQ=255)
                           gAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGc                                                                                                                                                <  2:1258822/128‑1 (MQ=255)
                           gAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAgcgcgc                                                                                                                           >  1:1508768/1‑149 (MQ=255)
                           gAAGGTGAAGCCGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAgcgcgc                                                                                                                           >  2:659957/1‑149 (MQ=255)
                            aaGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGcc                                                                                                                          <  1:1446592/149‑1 (MQ=255)
                             aGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGACGCCGCATGTGGCGCTGAGCGCGccc                                                                                                                         >  2:1495559/1‑149 (MQ=255)
                                 gAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTc                                                                                                                     <  1:1234718/149‑1 (MQ=255)
                                 gAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTc                                                                                                                     <  2:4867/149‑1 (MQ=255)
                                  aaGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGGAAGCGCCTGGTGTCGGCCCTGCACCTCGCCGCAGCCGGATGTGGCGCTGAGCGCGCCCAGTcc                                                                                                                    <  1:1260200/149‑1 (MQ=255)
                                    gCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCgg                                                                                                                  >  1:992572/1‑149 (MQ=255)
                                     cTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTGAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGc                                                                                                                 >  1:255894/1‑149 (MQ=255)
                                       gACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCtt                                                                                                               >  2:1127505/1‑149 (MQ=255)
                                       gACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCtt                                                                                                               <  2:912968/149‑1 (MQ=255)
                                       gACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCtt                                                                                                               <  1:143241/149‑1 (MQ=255)
                                       gACCATCGGGATCAATATTGCAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGAGCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTGGCCGAAGCCGGATGGGGCGCTGAGCGCGCCCAGTCCGGCtt                                                                                                               <  1:1605413/149‑1 (MQ=255)
                                           aTCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGa                                                                                                           >  1:1025869/1‑149 (MQ=255)
                                            tCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATTTGGCGCTGAGCGCAGCAAGTCCGGATTCGGaa                                                                                                          >  1:1494941/1‑149 (MQ=255)
                                              gggATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGa                                                                                                        <  2:1170251/149‑1 (MQ=255)
                                               ggATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGAt                                                                                                       <  1:48395/149‑1 (MQ=255)
                                               ggATCAATATTGTGGGGATGAAGAGCGGGCCGGCGAGCAAAGTATGTTGATCTGTTGTTCGCGTGGGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGAt                                                                                                       <  2:698707/149‑1 (MQ=255)
                                                gATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGAtt                                                                                                      <  2:879511/149‑1 (MQ=255)
                                                 aTCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGAttt                                                                                                     >  1:473293/1‑149 (MQ=255)
                                                 aTCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGAttt                                                                                                     >  1:1455506/1‑149 (MQ=255)
                                                   cAATATTTTAGCGATGAAGAGCTTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTa                                                                                                   <  1:188969/149‑1 (MQ=255)
                                                   cAAAATTTTAGCGATGAAGAGCGAGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTa                                                                                                   <  1:188979/149‑1 (MQ=255)
                                                    aaTATTTTATCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAt                                                                                                                                           <  1:301858/108‑1 (MQ=255)
                                                    aaTATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGAt                                                                                                                                           >  2:301858/1‑108 (MQ=255)
                                                     atatTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTa                                                                                                   <  2:596056/147‑1 (MQ=255)
                                                              cGATGAAGAGCGTGCCAGCCAGCAAAGAATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATATTACTGCGGATAtt                                                                                        >  2:1582068/1‑149 (MQ=255)
                                                               gATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAACGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTc                                                                                       >  1:1062453/1‑149 (MQ=255)
                                                                aTGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTcc                                                                                      >  2:1277003/1‑149 (MQ=255)
                                                                aTGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTCCGGATATTcc                                                                                      >  2:169696/1‑149 (MQ=255)
                                                                 tGAAGAGCCTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCTAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCATTCCGGCTTCGGAAGATTTTACTGCGGATATTCCt                                                                                     <  1:258477/149‑1 (MQ=255)
                                                                  gAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTg                                                                                    <  1:433636/149‑1 (MQ=255)
                                                                   aaGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGc                                                                                   >  1:892631/1‑149 (MQ=255)
                                                                         gTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATaaa                                                                             <  1:1502552/149‑1 (MQ=255)
                                                                          tGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCtt                                                                                                               <  2:414545/114‑1 (MQ=255)
                                                                          tGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAAt                                                                            >  1:1502306/1‑149 (MQ=255)
                                                                           gccagccaGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAAtt                                                                           <  2:1304996/149‑1 (MQ=255)
                                                                             cagccagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATtgt                                                                         <  1:67149/149‑1 (MQ=255)
                                                                              agccagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATTTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATtgtg                                                                        >  1:255681/1‑149 (MQ=255)
                                                                                 cagcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTCCGGATATTCCTGCAATAAATTGTGTaa                                                                     >  2:332894/1‑149 (MQ=255)
                                                                                  agcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCgg                                                                                                                  <  2:1009071/103‑1 (MQ=255)
                                                                                  agcAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCgg                                                                                                                  >  1:1009071/1‑103 (MQ=255)
                                                                                     aaaGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTTGTTAATGCt                                                                 >  1:709344/1‑149 (MQ=255)
                                                                                      aaGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCtt                                                                <  1:169696/149‑1 (MQ=255)
                                                                                      aaGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCtt                                                                >  2:1415007/1‑149 (MQ=255)
                                                                                        gTATGATGATCTATTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCTGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTCTAATGCTTcc                                                              >  2:1399437/1‑149 (MQ=255)
                                                                                         tATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGGGGGATGTGGCGCTGAGCGCGGCCAGTCCGGCTTCGGAAGATTTTACTGCGGAGCTTCCTGAAATAGATTGTGTAATGCTTCCg                                                             >  1:1337860/1‑149 (MQ=255)
                                                                                           tGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAGATTGTGTAATGCTTCCGcc                                                           >  1:1304017/1‑149 (MQ=255)
                                                                                                aTCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAg                                                      >  1:1252849/1‑149 (MQ=255)
                                                                                                   tgttgtTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTCGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATACACTGTGTCATGCTTCCGCCATCAACTc                                                   >  2:140554/1‑149 (MQ=255)
                                                                                                   tgttgtTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATACTTCCGCCATCAGCTc                                                   >  2:140505/1‑149 (MQ=255)
                                                                                                    gttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGgcg                                                                                                                                     >  2:836471/1‑66 (MQ=255)
                                                                                                    gttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGgcg                                                                                                                                     <  1:836471/66‑1 (MQ=255)
                                                                                                    gttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTca                                                  >  1:503776/1‑149 (MQ=255)
                                                                                                     ttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTcc                                                                                                                    >  1:1355669/1‑82 (MQ=255)
                                                                                                     ttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcac                                                 >  2:576637/1‑149 (MQ=255)
                                                                                                     ttgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAAGAAATTGTGTAATGCTTCCGCCATCAGCTcac                                                 >  1:672528/1‑149 (MQ=255)
                                                                                                      tgttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacc                                                <  2:919496/149‑1 (MQ=255)
                                                                                                        ttCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcaccac                                              <  1:576637/149‑1 (MQ=255)
                                                                                                            cgTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATGTTCCTGCCATAGATTGTGTAATGCTTCCGCCATCAGCTCACCGCGCCa                                          >  1:689051/1‑149 (MQ=255)
                                                                                                               gCGAAGGGTAAACGCCTGGTGTGGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGcc                                       <  1:702505/149‑1 (MQ=255)
                                                                                                                 gAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTGCTGCAATACATTGTGTCATGATTGCGCCATCCGCTCACCACGCCAGGCgg                                     >  1:580357/1‑149 (MQ=255)
                                                                                                                 gAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCAGCCATCAGCTCACCACGCCAGCCgg                                     >  2:84558/1‑149 (MQ=255)
                                                                                                                      gTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATc                                <  1:1007862/149‑1 (MQ=255)
                                                                                                                       tAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCa                               >  2:1327501/1‑149 (MQ=255)
                                                                                                                        aaaCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAg                              <  1:659957/149‑1 (MQ=255)
                                                                                                                         aaCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacc                                                <  1:10416/130‑1 (MQ=255)
                                                                                                                         aaCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTcacc                                                >  2:10416/1‑130 (MQ=255)
                                                                                                                          aCGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCt                            >  1:1218660/1‑149 (MQ=255)
                                                                                                                            gCCTGGTGTTGGATTGGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTcc                          <  2:1146249/149‑1 (MQ=255)
                                                                                                                                  tgtTTGATTTGGAGTTTGCCGAAGCCGGCTGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGACTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCCCCACGCCAGCCGGAAATCAGCTCCGGCaaa                    <  2:129426/149‑1 (MQ=255)
                                                                                                                                  tgtTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATaaa                                                                             <  1:755349/92‑1 (MQ=255)
                                                                                                                                  tgtTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATaaa                                                                             >  2:755349/1‑92 (MQ=255)
                                                                                                                                     tGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTg                 <  2:473293/149‑1 (MQ=255)
                                                                                                                                         tttGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCt             <  2:1025869/149‑1 (MQ=255)
                                                                                                                                            gTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCg          <  2:1501328/149‑1 (MQ=255)
                                                                                                                                            gTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAAATTTTACTGCGGATATTCCTGCAATAAATTGTGGAATGCTTCAGCGATCAGCTCAGCACGCCAGCCGGAGATAAGCGCCGGCAGATTGTTCTGCg          >  1:550020/1‑149 (MQ=255)
                                                                                                                                            gTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGCCAAAGTGTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCg          >  1:315535/1‑149 (MQ=255)
                                                                                                                                                 ctGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAAGTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCGCCGGCAAATTGTTCTGCGGTTTc     <  2:692079/148‑1 (MQ=255)
                                                                                                                                                  tGCCGAAGCCGGATGTGGCGCTGAGCGTGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCa    <  2:698437/149‑1 (MQ=255)
                                                                                                                                                    ccGAAGCCGGATGTGGCGCGGAGCGCGCCCAGTCGGGCTTCGGAAGATTTTACTGCTGATATTCCTGCAATAAAGTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGt  <  2:1147459/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAGTTTGCCGAAGCCGGATGTGGCGCTGAGCGCGCCCAGTCCGGCTTCGGAAGATTTTACTGCGGATATTCCTGCAATAAATTGTGTAATGCTTCCGCCATCAGCTCACCACGCCAGCCGGAAATCAGCTCCGGCAAATTGTTCTGCGGTTTCAGT  >  NC_000913_3_pae_pgi/1886667‑1886963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.