New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	1354213 =	68 (1.140)	5 (0.090)	5/264	7.3	7.2%	coding (306/891 nt)	sapC	antimicrobial peptide transport ABC transporter permease
	?	NC_000913_3_pae_pgi	1354235 =	64 (1.130)					coding (284/891 nt)	sapC	antimicrobial peptide transport ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAACGATAATTGCCAACAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTGGTCGATG  >  NC_000913_3_pae_pgi/1354068‑1354360                                                                                                                                                  |                                                                                                                                                    cAACGATAATTGCCAACAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATgcg                                                                                                                                                  <  2:529967/149‑1 (MQ=255) cAACGATAATTGCCAACAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCGGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATgcg                                                                                                                                                  <  2:435325/149‑1 (MQ=255)    cGATAATTGCCAACAGCAGCGAAGGGATCGCCAGTAAGGAATCCAGATTATGGTTAAGCACCGCTGAGCGGAGGCCGTGCGTCGCCCCGGCGAAGGTGCCCAGTAACAGGCCACAGATCGTCGTGGCAAGCGTCACCACAAATGCGcca                                                                                                                                               <  1:802896/149‑1 (MQ=255)             ccAACAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGtt                                                                                                                                      >  1:203682/1‑149 (MQ=255)                aCAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGgc                                                                                                                                   >  2:313647/1‑149 (MQ=255)                aCAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGgc                                                                                                                                   <  1:161645/149‑1 (MQ=255)                aCAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGgc                                                                                                                                   <  1:49450/149‑1 (MQ=255)                     agcGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGc                                                                                                                              <  1:588413/149‑1 (MQ=255)                        gAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTcc                                                                                                                           <  1:178867/149‑1 (MQ=255)                        gAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTcc                                                                                                                           <  1:595229/149‑1 (MQ=255)                         aaGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCAACCGTGGGTGGCGCatttgtg                                                                                                                          <  1:127645/149‑7 (MQ=255)                             gATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCa                                                                                                                      <  1:645548/149‑1 (MQ=255)                               tCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGt                                                                                                                    >  2:77370/1‑149 (MQ=255)                               tCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGt                                                                                                                    >  1:556429/1‑149 (MQ=255)                                  ccAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTaaa                                                                                                                 >  2:381134/1‑149 (MQ=255)                                  ccAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTaaa                                                                                                                 >  1:970860/1‑149 (MQ=255)                                  ccAGGAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTaaa                                                                                                                 <  1:479568/149‑1 (MQ=255)                                            aTCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCCTaaaa                                                                                                       >  1:77277/1‑149 (MQ=255)                                                     atGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTc                                                                                              <  2:874884/149‑1 (MQ=255)                                                         ttAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACCGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAg                                                                                          >  2:709865/1‑149 (MQ=255)                                                              caccacCGAGCGGAGGCCGTGGGGCGCCCCGGCGAAGGTGCCCAGGACCAGGCCACAGATCGTCGCGCCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGgtcgt                                                                                     <  2:63358/149‑1 (MQ=255)                                                                  gCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAg                                                                                          >  1:601045/1‑140 (MQ=255)                                                                  gCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAg                                                                                          <  2:601045/140‑1 (MQ=255)                                                                  gCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCCCGTCCGGGGTCGTCAGt                                                                                 >  2:725301/1‑149 (MQ=255)                                                                             gCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGgaaga                                                                      >  1:400909/1‑149 (MQ=255)                                                                               cGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTg                                                                                                                                     >  2:517212/1‑84 (MQ=255)                                                                               cGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTg                                                                                                                                     <  1:517212/84‑1 (MQ=255)                                                                                 tgtgtCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGaagaaaga                                                                  <  2:556429/149‑1 (MQ=255)                                                                                        ccccGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAg                                                                                                                     <  2:904507/91‑1 (MQ=255)                                                                                        ccccGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAg                                                                                                                     >  1:904507/1‑91 (MQ=255)                                                                                         cccGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCGACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAAGATCGCGTCCGAGGTCGTCAGTCCCGAGGAAGAGAGAAACTTCGc                                                          >  1:801179/1‑149 (MQ=255)                                                                                          ccGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGcc                                                         <  1:313647/149‑1 (MQ=255)                                                                                                      cccAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCCCCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCATCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCCCCATAGCGCGcccc                                             >  2:177131/1‑148 (MQ=255)                                                                                                      cccAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAgcgc                                                  >  2:307868/1‑144 (MQ=255)                                                                                                      cccAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAgcgc                                                  <  1:307868/144‑1 (MQ=255)                                                                                                       ccAGTACCAGGCCAGAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTTAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCAt                                            <  2:794999/149‑1 (MQ=255)                                                                                                        cAGTACCAGGCCACAGATCGTCGCGGCCAGCGTCACCACAACTGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAAAATCGCGTCCGAGGCCGTCAGTCCCCACGAAGAAAGAAACTTCCCCCTAGCGCGACCATg                                           >  1:46221/1‑149 (MQ=255)                                                                                                         aggaCCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGa                                          <  2:203682/146‑1 (MQ=255)                                                                                                         aGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGa                                          <  1:817656/149‑1 (MQ=255)                                                                                                         aGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCAAAAATGCGCCACCCACGGTTGGCGCAGCTCCGCCCAGTAAACGGCTTAAAACATCGCGTCCGCGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATACACGGACCATGa                                          >  2:290727/1‑149 (MQ=255)                                                                                                            aCCAGGCCACAGATCGTCGCGCCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCCCAGTAAACGGCCTAAAACCTCGCGTCCGACGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCCTAGCGCGACCATgcacg                                       >  2:253391/1‑145 (MQ=255)                                                                                                              cAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGCCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGAcggcg                                     >  1:10851/1‑149 (MQ=255)                                                                                                               aGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGa                                                                                           <  2:66053/94‑1 (MQ=255)                                                                                                               aGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGa                                                                                           >  1:66053/1‑94 (MQ=255)                                                                                                                 gCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGaagaaag                                                                   <  2:243576/116‑1 (MQ=255)                                                                                                                 gCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGaagaaag                                                                   >  1:243576/1‑116 (MQ=255)                                                                                                                   cacaGACCGGCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCaat                                <  1:119051/149‑1 (MQ=255)                                                                                                                    acaGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCa                                                                                   >  2:94324/1‑97 (MQ=255)                                                                                                                    acaGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCa                                                                                   <  1:94324/97‑1 (MQ=255)                                                                                                                     caGTTCGTCGCCGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCaataa                              <  2:341701/149‑1 (MQ=255)                                                                                                                        aTCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTg                           >  1:855594/1‑149 (MQ=255)                                                                                                                              gcgGCAAGTGTCACCACAAATGCGCAACCCACGGTTCGCGCAGCTCCGCTCATTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAAcc                     <  2:393393/149‑1 (MQ=255)                                                                                                                               cgGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTAAGTCCCCAAGAAGAAAGAAACTTCGCCATAGCGCAACCATAACGGCGGCAATAATTGATAACCg                    >  1:393393/1‑149 (MQ=255)                                                                                                                                  cAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCgaga                 >  1:720698/1‑149 (MQ=255)                                                                                                                                   aaGCGTCACCACAAATCCGCCACCCACGGTAGGCGCAGCTCCGCTCAGAAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACAATGACGGCGGCCAAAATGGATAAcggcgac                >  2:828541/1‑143 (MQ=255)                                                                                                                                    aGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAACCCCCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGaaa               <  1:824939/149‑1 (MQ=255)                                                                                                                                     gCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCg                                                           >  2:656467/1‑104 (MQ=255)                                                                                                                                     gCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCGCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCg                                                           <  1:656467/104‑1 (MQ=255)                                                                                                                                         caccacAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCt          <  2:970860/149‑1 (MQ=255)                                                                                                                                           ccacAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTgg        <  1:77370/149‑1 (MQ=255)                                                                                                                                             acaAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTGGTc      >  2:350885/1‑149 (MQ=255)                                                                                                                                             acaAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGCCAGGCCCCAGGAAGAAACAAACTTCGCCATAGCGCTACCATGACGGCGGCAATAATCGATAAACGAGAAATTACAGGTc      >  1:647543/1‑149 (MQ=255)                                                                                                                                             acaAATGCGCCACCCACCATTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCCATAATTGATAACCGCGAAATTGCTGCTc      >  2:976822/1‑149 (MQ=255)                                                                                                                                              caAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTGGTCg     >  2:762383/1‑149 (MQ=255)                                                                                                                                               aaaTGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCa                                                                                   >  1:160937/1‑70 (MQ=255)                                                                                                                                               aaaTGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCa                                                                                   <  2:160937/70‑1 (MQ=255)                                                                                                                                               aaaTGCGCCACCCACGGTTGGCGCAGCTCCGCACAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGACATAATTGATAGCCGAGAAATTGCTGGTAGa    >  2:243750/1‑149 (MQ=255)                                                                                                                                                 aTGCGCCACCCACGGTCGGCGCAGCTCCGCTCAGTAAACGGCGTAAAACATCGCCCCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTGCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTGGTCGAtt  <  2:801179/149‑2 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CAACGATAATTGCCAACAGCAGCGAAGGGATCGCCAGTAAGGTATCCAGAATATGGTTAAGCACCGCTGAGCGGAGGCCGTGTGTCGCCCCGGCGAAGGTGCCCAGTACCAGGCCACAGATCGTCGCGGCAAGCGTCACCACAAATGCGCCACCCACGGTTGGCGCAGCTCCGCTCAGTAAACGGCTTAAAACATCGCGTCCGAGGTCGTCAGTCCCCAGGAAGAAAGAAACTTCGCCATAGCGCGACCATGACGGCGGCAATAATTGATAACCGAGAAATTGCTGGTCGATG  >  NC_000913_3_pae_pgi/1354068‑1354360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.