New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 3699911	65 (1.090)	6 (0.110)	6/260	6.7	8.8%	intergenic (+18/+69)	bcsG/ldrD	DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small
	?	NC_000913_3_pae_pgi	= 3699921	63 (1.130)					intergenic (+28/+59)	bcsG/ldrD	DUF3260 family cellulose production inner membrane protein/toxic polypeptide, small
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATG  >  NC_000913_3_pae_pgi/3699773‑3700067                                                                                                                                                     |                                                                                                                                                   cACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccccc                                                                                                                                                    <  1:778006/149‑1 (MQ=255)  aCCAGTGGGTTGCCACAAACAGCACCGGTCTCCGGGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGATCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCACTAAGAACGAAAAAGGCCGCAGACTTTcccccc                                                                                                                                                   >  2:253519/1‑149 (MQ=255)   ccAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGCTAAACCGTACGTTAGCCTGAACGGCGGAGACTGGCTGACTTACTGGCAGGAAGAACGAGAGAGGCCGCAGCGTTTCCCCCCt                                                                                                                                                  >  2:112639/1‑149 (MQ=255)    cAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGAAGTTATTCAATACCAGGCTAAACCGTACGTGCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAACAGGCCCCCGAGTCTACCCCCTg                                                                                                                                                 >  2:544362/1‑149 (MQ=255)        gggTTGTCACAAACAGCACCGGTCTTCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATACACCGTACGTTCGCCTGGCCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGc                                                                                                                                             <  1:950945/149‑1 (MQ=255)          gTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACCGGGTGCCTTACCCCCAGTAAGAACGAAAAAAGCCCCAGATATTCGCCCCTGCGGccc                                                                                                                                           >  2:58432/1‑148 (MQ=255)           ttGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGGTTCCCCCCTGCGGCCTg                                                                                                                                          >  1:77690/1‑149 (MQ=255)              ccACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTc                                                                                                                                       >  1:531349/1‑149 (MQ=255)               cacaAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCCGTAAGAACGAAAAAGGCCGCAGAGTCTCCCCCCTGCGACCTGGTcc                                                                                                                                      >  2:578752/1‑149 (MQ=255)               cacaAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTAGTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCATTACCCGCGGTAAGAACGATACAGGCCGCAGCATTTCCCACCTGCGGccctgccc                                                                                                                                      >  2:732178/1‑143 (MQ=255)               cacaAACAGCACCGGCCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCGGCAGAGTTTCCCCCCTGCGTCCTGGTcc                                                                                                                                      >  1:932006/1‑149 (MQ=255)                      aGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGTCGCa                                                                                                                               >  2:745874/1‑149 (MQ=255)                      aGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCa                                                                                                                               >  1:180885/1‑149 (MQ=255)                        cACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCAGGCGCaaa                                                                                                                             >  1:367298/1‑149 (MQ=255)                               ctcAGAGAACGCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTGACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAt                                                                                                                      <  1:334452/149‑1 (MQ=255)                                   gagaACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACg                                                                                                                  >  1:558136/1‑149 (MQ=255)                                         tCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc                                                                                                            >  1:492437/1‑149 (MQ=255)                                           aaaTGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCtc                                                                                                          >  2:542571/1‑148 (MQ=255)                                              tGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCGTTACGGCAGCCTGACg                                                                                                       >  2:137150/1‑149 (MQ=255)                                                cAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGcc                                                                                                     <  2:87562/149‑1 (MQ=255)                                                 agtagtTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCGGACGccc                                                                                                    <  2:79227/149‑1 (MQ=255)                                                  tcttttATTCATTACCAGGATATACCGTATGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCg                                                                                                   <  2:474751/145‑1 (MQ=255)                                                    agtTATGCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa                                                                                                 <  1:945885/149‑1 (MQ=255)                                                      ttATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGACAAACCCTCAATAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGccccccga                                                                                               >  1:474751/1‑144 (MQ=255)                                                      ttATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTAGGTGCCTTACCCGCGGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCTGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATg                                                                                               >  1:926160/1‑149 (MQ=255)                                                       tATTCAATACGAGGATAACCCGTACGTTCGACTGAACGGCGGCGACTGGGTCCCTTACCCGCAGTAAGAACGACAAAGGCCGCAGAGTTTCCCCGCTGCGGCCTGGTCCGGGCGCAAATGGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                              <  2:227837/149‑1 (MQ=255)                                                       tATTCAAGACCCGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCGTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCGCGCATGa                                                                                              <  2:485716/149‑1 (MQ=255)                                                         atCAATACCAGGACAACCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGGCTGACGCCCGCATGaca                                                                                            <  2:657730/148‑1 (MQ=255)                                                           cAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGCCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACg                                                                                          <  2:577449/149‑1 (MQ=255)                                                            aaTACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGt                                                                                         <  2:981360/149‑1 (MQ=255)                                                            aaTACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACCGCCGCCTGACGCCCGCATGACACGt                                                                                         >  2:688598/1‑149 (MQ=255)                                                                 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa                                                                                                                       <  1:1036192/114‑1 (MQ=255)                                                                 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCa                                                                                                                       >  2:1036192/1‑114 (MQ=255)                                                                 cAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACG‑AAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGCCCCGTTACTTc                                                                                   >  2:1009142/1‑149 (MQ=255)                                                                 cAGGATAAACCGCACGTTCGCCTGAACGGCGGCCACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGGTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACtt                                                                                    <  2:627120/149‑1 (MQ=255)                                                                  aGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCGTGACACGTTCCTTc                                                                                   >  2:1035753/1‑149 (MQ=255)                                                                       aaaCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCtt                                                                              <  2:663681/149‑1 (MQ=255)                                                                          ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                                                                       >  2:933626/1‑137 (MQ=255)                                                                          ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTa                                                                                       <  1:933626/137‑1 (MQ=255)                                                                             tACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAg                                                                        <  2:180885/149‑1 (MQ=255)                                                                              aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGc                                                                       <  1:745874/149‑1 (MQ=255)                                                                              aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGc                                                                       <  2:8974/149‑1 (MQ=255)                                                                                gTTCGCGTGAACCGCGGCGACTGGGTGCCATACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGAACATCGAGATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCa                                                                     <  1:207049/149‑1 (MQ=255)                                                                                 ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACCCGTTACTTCCGCTTGTTCAGCCAg                                                                    >  2:674009/1‑149 (MQ=255)                                                                                 ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                                                                    >  1:203433/1‑149 (MQ=255)                                                                                 ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAg                                                                    >  2:582231/1‑149 (MQ=255)                                                                                     ccTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCa                                                                <  2:142651/149‑1 (MQ=255)                                                                                                    cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCaa                                                 <  1:578752/149‑1 (MQ=255)                                                                                                       ggTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGACAGTTCACGATCATACTGGCACGaa                                              >  2:323430/1‑149 (MQ=255)                                                                                                         tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGacac                                                                                           <  2:850332/102‑1 (MQ=255)                                                                                                         tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGacac                                                                                           >  1:850332/1‑102 (MQ=255)                                                                                                         tGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATg                                            >  1:707307/1‑149 (MQ=255)                                                                                                                 ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                              >  2:400785/1‑91 (MQ=255)                                                                                                                 ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGa                                                                                              <  1:400785/91‑1 (MQ=255)                                                                                                                 ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAt                                    >  1:839654/1‑149 (MQ=255)                                                                                                                 ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCAGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAt                                    <  1:470145/149‑1 (MQ=255)                                                                                                                 ccGCAGTAAGAACGAAAAAGGCCGAAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCCCGATCATCCTGGCAAGAATGCCAGCAAt                                    >  1:913765/1‑149 (MQ=255)                                                                                                                  cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATg                                   >  1:230670/1‑149 (MQ=255)                                                                                                                     aGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAGGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGAcc                                <  1:778381/149‑1 (MQ=255)                                                                                                                          gAACGAAAAAGGCCGCAGATTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt                                                                  <  1:245507/110‑1 (MQ=255)                                                                                                                          gAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGtt                                                                  >  2:245507/1‑110 (MQ=255)                                                                                                                             cGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCTGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGc                        <  2:926160/149‑1 (MQ=255)                                                                                                                                     gCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGACGCAAATTACCATTACGGGAGCCTGACGCCCGAATGACACGGTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAAGGCCAGGAGCCGCTAAATCAt                >  1:112370/1‑149 (MQ=255)                                                                                                                                            agTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGaa         >  1:342452/1‑149 (MQ=255)                                                                                                                                                 ccccccGGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCa    <  2:77690/149‑1 (MQ=255)                                                                                                                                                  cccccTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATc                                                           >  1:1016120/1‑93 (MQ=255)                                                                                                                                                  cccccTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATc                                                           <  2:1016120/93‑1 (MQ=255)                                                                                                                                                  cccccTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCAt   >  1:954252/1‑149 (MQ=255)                                                                                                                                                   ccccTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGCGCCGATACATCATGCCAGAAGGCCATg  >  1:977616/1‑149 (MQ=255)                                                                                                                                                   ccccTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATg  <  2:203433/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACACGTTACTTCCGCTTGTTCAGCCAGTTCACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATG  >  NC_000913_3_pae_pgi/3699773‑3700067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.