Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_vch_pgi	1528465–1529174	1529192	19–728	4 [3]	[3] 4	rhsE	pseudogene, Rhs family

ATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATG  >  NC_000913_3_vch_pgi/1529178‑1529339                |                                                                                                                                                   atctttATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAggg               >  1:112717/4‑149 (MQ=255)           cggCGACCACCGGGGACTGCCGGTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCatg     <  2:90202/147‑1 (MQ=255)           cTGCGACCACCGGGGACTGCCGCTGGCGCTTCTCAGCGAAGACGGCAATACGGCGGGGCGCGGGGAGTATGATGAAGGGGGCAACCAGCTTCATGAAGAGAACCCGCATCACCTGCACCAGCCAGACCGTTAGCCAGGgccgcagcaag     >  2:4459/1‑147 (MQ=14)              caaccacaGGCGACCGCCGCAGGCGCATACCAGCGAAAACGGCAATACGGCCTGGCGCCGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAAAACTCGCATCACCTGCACCAGACGTACCGTCTGCCAGGGCAGCAGCatgatg  <  1:299237/147‑1 (MQ=14)                |                                                                                                                                                   ATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATG  >  NC_000913_3_vch_pgi/1529178‑1529339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑