New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3867586 =	35 (0.820)	4 (0.100)	4/274	5.8	9.9%	intergenic (‑164/‑142)	ibpA/yidQ	heat shock chaperone/DUF1375 family outer membrane protein
	?	NC_000913_3_hsa_tpiA	3867601 =	39 (0.960)					intergenic (‑179/‑127)	ibpA/yidQ	heat shock chaperone/DUF1375 family outer membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTT  >  NC_000913_3_hsa_tpiA/3867460‑3867744                                                                                                                                              |                                                                                                                                                ttCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAggggg                                                                                                                                          >  1:586242/1‑149 (MQ=255) ttCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTAAggggg                                                                                                                                          >  1:695736/1‑149 (MQ=255)   ccACAAGGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGgca                                                                                                                                        <  1:753453/149‑1 (MQ=255)       aaTGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTACAGCTTAAGGGCCATTGGATAGACTGAAGGGacagaca                                                                                                                                    >  1:725197/1‑146 (MQ=255)        aTGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGCAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCCGTTTATGGACTATTGCATTAACTGAGCAGGCCGCACg                                                                                                                                   >  2:401555/1‑149 (MQ=255)            agagatcaggtAGCCAGAACACCCCTCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCTGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAAc                                                                                                                               <  2:95419/144‑1 (MQ=255)                gtcaggtAGCCAGAACACCCATCAGGCGCGTCCCCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTa                                                                                                                           <  1:9250/149‑1 (MQ=255)                  caggtGGCCAGAACGCCCGTCAGGCGCGTCCTCATCGGTTACGAGGTAAAAATGGGTATGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTaaa                                                                                                                         <  2:262701/149‑1 (MQ=255)                  caggtAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTaaa                                                                                                                         <  1:593190/149‑1 (MQ=255)                       acacAGAACACCCAACAGGCGCTTCCCCATCGGCTACTAGATAAAAATGGGTCTGGAAACGAACTTTACAAGCCTCACCAGCAGACTTTCTCTTGCAGTTTATGGTCTACTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCg                                                                                                                    <  2:220939/146‑1 (MQ=255)                        acaaGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGa                                                                                                                   <  2:267837/146‑1 (MQ=255)                          cAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAGGGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATa                                                                                                                 >  1:25548/1‑149 (MQ=255)                            gAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATaac                                                                                                               >  2:633489/1‑147 (MQ=255)                                acCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAgccgcc                                                                                                           >  1:209585/1‑149 (MQ=255)                                  ccATCCGTCGCCTCCGTATCTGCTACGAAGTAAAAATGGGTCTGGAAATGAACTTTTCAAGGCTTATGATCGGACTTTTTTTTTCAGTTTATTGTCTATTTGGTAGACTGAGGGAGCCACACGCAGCGTTAAAGTGCGATGCCTGCcac                                                                                                         >  2:621306/1‑149 (MQ=255)                                    aTCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTCATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAg                                                                                                       >  2:630260/1‑149 (MQ=255)                                         gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGaaa                                                                                                                                <  1:511870/119‑1 (MQ=255)                                         gcgcGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGaaa                                                                                                                                >  2:511870/1‑119 (MQ=255)                                           gcgTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACg                                                                                                >  1:183997/1‑149 (MQ=255)                                              tCCTCATCGGCTACGATGTAAAAATGGTGCTGGAAATTAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTaa                                                                                             <  2:524830/149‑1 (MQ=255)                                                                    aaTGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTTTAGTTTATGGTCTATTGCATAGACTGAGGGAGCAGCACGAAACGTTAAAGTACGATAGCCGCCACTGTGCGACGTCATGATCATGTTATTTGTAGCAAg                                                                       >  2:597416/1‑149 (MQ=255)                                                                            tGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTATATGCTCTATTGCATAGACTGAGGGGCCAGCACGCAACGTTAAAGTACGATAGCCGCCACAGTGCGACGCACTGATCTTGTTCTTCTCAGCAAGGGacccct                                                               >  2:708603/1‑144 (MQ=255)                                                                              gcaaTGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATATCCAGAGGGGGCAGCACGAAACGTTAAAGTACGATAACCGCCACAGTGCGACGAAATCATGATGTTATTTTCAGCACCGGATCGCtat                                                             >  2:449747/3‑149 (MQ=255)                                                                                aaTGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGTAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTCCGACGTAATGATGATGTTCTATTCCGCAAGGGATCGCTATaa                                                           >  2:614343/1‑149 (MQ=255)                                                                                   gAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACtc                                                        >  1:164866/1‑149 (MQ=255)                                                                                       ttttCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACtcatca                                                    <  1:373113/149‑1 (MQ=255)                                                                                             aGCCTTATCAGCGGACTTTTTTTTGCAGTTTAGGGTCTATTGCATAGACGGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCaa                                              <  2:58369/149‑1 (MQ=255)                                                                                             aGCCCTAGCAGCGGCCTTTTTTTTGCAGTTTATGGCCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCaa                                              <  1:549898/149‑1 (MQ=255)                                                                                                       gCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGAt                                    >  1:259516/1‑149 (MQ=255)                                                                                                            cTTTTTTTTGCAGTTTATGGTCTAGTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACa                               <  2:498574/149‑1 (MQ=255)                                                                                                             ttttttttGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGCTCAACAg                              >  1:59582/1‑149 (MQ=255)                                                                                                             ttttttttGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAg                              >  1:574757/1‑149 (MQ=255)                                                                                                                        gTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATttatt                   <  1:616644/149‑1 (MQ=255)                                                                                                                         gtgatagTCTATTGCATAGACAGAGCCGGCAGCACGAACGGGCAAAGTGGGATAGCCGCCACAGATCGACGGAATGAGGATGTTATTTTCAGCAAGGGACAGCTATAACTCATAAAGCCCACACCCACGATCAGCAGATGAATttagta                  >  2:64173/7‑149 (MQ=255)                                                                                                                               gTCTAGTGCATAGCCTGAGGGGGCAGAACTAAACGTTAAAGGGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATaa            <  2:594914/149‑1 (MQ=255)                                                                                                                                tCTAATGCAGAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAg           <  2:557804/149‑1 (MQ=255)                                                                                                                                  tATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGaa         >  1:31043/1‑149 (MQ=255)                                                                                                                                   gttGCATAGACTGAGGGGGCAGCAAGCAACGTTAAAGTTCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTTTTATGATAAGaaa        <  2:725197/148‑1 (MQ=255)                                                                                                                                   aTTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGaaa        >  2:423601/1‑149 (MQ=255)                                                                                                                                         tAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGtgtt  <  2:691321/149‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                TTCCACAATGGACAGGTCAGGTAGCCAGAACACCCATCAGGCGCGTCCTCATCGGCTACGATGTAAAAATGGGTCTGGAAATGAACTTTTCAAGCCTTATCAGCGGACTTTTTTTTGCAGTTTATGGTCTATTGCATAGACTGAGGGGGCAGCACGAAACGTTAAAGTGCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCACGATCAACAGATGAATTTATTATGATAAGAAATGTGTT  >  NC_000913_3_hsa_tpiA/3867460‑3867744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.