New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2347274	74 (1.740)	5 (0.120)	5/276	5.3	6.3%	noncoding (115/203 nt)	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences
	?	NC_000913_3_hsa_tpiA	= 2347284	78 (1.900)					noncoding (125/203 nt)	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences	REP164 (repetitive extragenic palindromic) element; contains 5 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGAAC  >  NC_000913_3_hsa_tpiA/2347137‑2347432                                                                                                                                                    |                                                                                                                                                     gaTGTAAGATGTTAATTTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTc                                                                                                                                                     <  1:356643/148‑1 (MQ=255)  aTGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCg                                                                                                                                                    >  2:163561/1‑149 (MQ=255)   tGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAGCTCGCATTGTAGGCGTGATCACCATCGCCAGCGTCGCATCAGGCCCCGGGTGCCGAATGCAACGTGGACGCCTTATCCGGCCTACGGCGCgg                                                                                                                                                   >  1:746462/1‑149 (MQ=25)     tAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCACCAACGCATCCAGCTCCGGGGGCCGCAGCCAGCCAGAACGCCTTATCGAGCCTCCGCCCCGGag                                                                                                                                                 >  2:649897/1‑148 (MQ=18)       aGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGAttt                                                                                                                                               <  1:384062/149‑1 (MQ=255)         aTCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGt                                                                                                                                             <  1:163561/149‑1 (MQ=255)            tGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAgg                                                                                                                                          >  2:280782/1‑149 (MQ=255)             gATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGc                                                                                                                                         >  2:196391/1‑149 (MQ=255)             gATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGc                                                                                                                                         >  2:592707/1‑149 (MQ=255)               tatTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCCCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGCAGCAGCGTGAACGCCTTATCCGGCCTACGGCCCGGATTTATAGCCCt                                                                                                                                       >  2:295987/1‑149 (MQ=25)               tatTGAGATGCCGCATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCt                                                                                                                                       <  2:141239/149‑1 (MQ=255)                 ttGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGa                                                                                                                                     <  1:280782/149‑1 (MQ=255)                  ggagaGGCCGGAGGCGGAGTAAACGCCTTATCCGGCCTACGGCGCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAAAGCATTAAGGTGCCTACGGCTCGGATTTGTAGGCCTGAt                                                                                                                                    <  2:732177/148‑1 (MQ=25)                    agaTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATaa                                                                                                                                  <  1:229757/149‑1 (MQ=255)                    agaTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATaa                                                                                                                                  <  1:382287/149‑1 (MQ=255)                         ccGGACGCGGCGTAAACGCCTTATCCGGCCTACGGCTCTGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGTATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGAcgc                                                                                                                             <  2:521766/149‑1 (MQ=255)                             aTGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCa                                                                                                                         >  2:250460/1‑149 (MQ=255)                               gcggcgTAAACGCCTTATTGTGCCTACGGCTCGGTTTTTAGGCCTGATAAGACGCGCTAGCGTCGCATCAGGCCCCGGGTGCCGGATGTAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGc                                                                                                                       <  2:115580/149‑1 (MQ=37)                               gcggcgTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGTTGTCTGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGc                                                                                                                       <  2:651023/149‑1 (MQ=255)                                    gTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGCCCTCCGGCTCGGATTTGTAGGCCTGAGTAAACGCGCCAGCGTCGc                                                                                                                  >  1:453748/1‑149 (MQ=37)                                       aaCGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCCGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATc                                                                                                               <  2:422582/149‑1 (MQ=255)                                            cTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGTCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGca                                                                                                          <  1:499712/149‑1 (MQ=255)                                                    gCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATgc                                                                                                  <  1:250460/149‑1 (MQ=255)                                                      cTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATgcgg                                                                                                >  1:399543/1‑149 (MQ=255)                                                       tACGGCTCGGTTTGTAGGCCTGATAAGACGCGACAGCGTCGCATCAAGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCTCCAGCGTCGCATCAGGCGCAGGAttaggc                                                                                               >  1:647803/1‑144 (MQ=25)                                                           gCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTaa                                                                                           >  1:466416/1‑149 (MQ=255)                                                             tCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTaaaa                                                                                         <  1:718879/149‑1 (MQ=255)                                                              cGGGTTGTACGGCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAAt                                                                                        <  1:362810/149‑1 (MQ=255)                                                                gTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGc                                                                                      >  1:457856/1‑149 (MQ=255)                                                                       ggCCTGATAAGACGCGGCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGAAGCTGTTGGCACAGGATGCGGCGTAAAATGCCTTATcc                                                                               <  1:181321/149‑1 (MQ=37)                                                                         ccctagaaGACGCGCCGACTTCGCATCAGGCTCCGGGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTCATAAGACGCGCCAGCGCCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCgg                                                                             <  2:207945/143‑1 (MQ=25)                                                                          cTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGcc                                                                                     <  2:251091/140‑1 (MQ=255)                                                                          cTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGcc                                                                                     <  2:253003/140‑1 (MQ=255)                                                                          cTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGcc                                                                                     >  1:251091/1‑140 (MQ=255)                                                                          cTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGcc                                                                                     >  1:253003/1‑140 (MQ=255)                                                                           tGATAAGACGCGCCAGCGTCGCATCAGGTTCCGGGTGCCGCATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCa                                                                           <  1:139450/149‑1 (MQ=255)                                                                           tGATAAGACGCACCAGCGTCGCATCAGGCGCCGGGGGCCGGAAGCAGCGTGAACGCCTTAGCCTGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCCTCAGGCACAGGATGCGACGTAAACTGCCTTATCCGGCa                                                                           >  2:561205/1‑149 (MQ=25)                                                                             aTAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATGCGAcgctggc                                                                                                                         >  1:59039/1‑97 (MQ=255)                                                                             aTAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTCTCCGGCAtt                                                                         >  2:733093/1‑149 (MQ=255)                                                                             aTAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCCtt                                                                         >  1:89960/1‑149 (MQ=255)                                                                                 gACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAAc                                                                     >  2:14317/1‑149 (MQ=255)                                                                                 gACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAAc                                                                     >  1:645571/1‑149 (MQ=255)                                                                                 gACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAAc                                                                     >  1:596918/1‑149 (MQ=255)                                                                                  ccgcgCCAGCGTCCCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACt                                                                    <  1:41556/148‑1 (MQ=255)                                                                                   cgccCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTc                                                                   <  1:209049/149‑1 (MQ=255)                                                                                    gctccAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGGTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTcc                                                                  <  1:675270/146‑1 (MQ=255)                                                                                     ggcCAGGGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTccc                                                                 <  2:13007/148‑1 (MQ=255)                                                                                       ccAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCaa                                                               <  2:346016/149‑1 (MQ=255)                                                                                          gCGTCGCATGAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAg                                                            <  2:466416/149‑1 (MQ=255)                                                                                            gTCGCATCAGGTTCCGGGTGCCGGATGCAGCGTGCATGGTGTATCAGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATGAGGCACAGGATGCGGCGTAAAATGCATTATCCGGGATTGAAATCCCAACAggc                                                          >  2:730790/1‑148 (MQ=25)                                                                                            gTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAgta                                                          <  1:410510/149‑3 (MQ=255)                                                                                            gTCGCATCAGCCTGCGGGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGCTTGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACGCCCAACAGGa                                                          <  1:659506/149‑1 (MQ=25)                                                                                                cATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGacaca                                                      <  1:196391/149‑1 (MQ=255)                                                                                                    aGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCa                                                  >  1:751440/1‑149 (MQ=255)                                                                                                      gCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATg                                                <  1:118096/149‑1 (MQ=255)                                                                                                       cTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACATACTCATgg                                               >  2:206577/1‑149 (MQ=255)                                                                                                       cTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACCAATgg                                               >  1:168734/1‑149 (MQ=255)                                                                                                             gTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCAtata                                         <  1:583438/149‑1 (MQ=255)                                                                                                             gTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCAtata                                         <  2:612751/149‑1 (MQ=255)                                                                                                                ccGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATacca                                      <  2:399543/149‑1 (MQ=255)                                                                                                                  ggATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATaccacc                                    <  1:444403/149‑1 (MQ=255)                                                                                                                           gTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAg                           >  2:245815/1‑149 (MQ=255)                                                                                                                            tGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATCAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGTCATATACCACCTTTTCACAGa                          <  2:668017/149‑1 (MQ=255)                                                                                                                                   cTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGaaaaa                   >  2:64577/1‑149 (MQ=255)                                                                                                                                    ttATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACGTTTTCACAGAGGAAAAAt                  >  1:271392/1‑149 (MQ=255)                                                                                                                                      aTCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGa                <  2:645571/149‑1 (MQ=255)                                                                                                                                       tgcGGGCTGCGGCTCGGATTGTTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGAt               <  2:106850/147‑1 (MQ=255)                                                                                                                                       tCCGGCCTAGGGGTCGGATTGGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGAt               <  2:403957/149‑1 (MQ=255)                                                                                                                                         cGGCCTACGGCTCGGATTTATAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACCCCCACCAGGACAAACACAGGGCATATACCACCTTTTCACGTACGAAAAATGATcc             >  2:641380/1‑148 (MQ=37)                                                                                                                                          ggCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                                                                   <  1:308394/46‑1 (MQ=255)                                                                                                                                          ggCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                                                                   >  2:308394/1‑46 (MQ=255)                                                                                                                                           tccTACGGCTCGGATTTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGc           <  2:576111/148‑1 (MQ=255)                                                                                                                                           gCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGc           <  2:193187/149‑1 (MQ=255)                                                                                                                                             taaCGGTTCGGAGTTGGGGGGCTGGGAAGACGCGCCATGGTCGCATCAGGCAAAGGATGCGGAGTAAAATGCCTTATGCGGCCTTAAACTCCCAACAGGACACACTCATGGCATCTAGCACCTTTTCACAGACGAAAAAGGATCAGCTc         <  2:169217/147‑1 (MQ=255)                                                                                                                                                cGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACCGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCCCCTTTCCACAGACGAAAAATGATCAgaccaac      >  2:376313/1‑143 (MQ=38)                                                                                                                                                  gCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATCTACCACCTTTTCACAGCCGAAACATGATCAGCTCACAGa    >  2:519203/1‑149 (MQ=255)                                                                                                                                                   cTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCt          >  2:511322/1‑142 (MQ=255)                                                                                                                                                   cTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCt          <  1:511322/142‑1 (MQ=255)                                                                                                                                                   cTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGaa   <  1:592707/149‑1 (MQ=255)                                                                                                                                                   cTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGaa   >  1:509170/1‑149 (MQ=255)                                                                                                                                                   cTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATCATCAGCTCAAAGaa   >  2:623457/1‑149 (MQ=255)                                                                                                                                                    tCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGAAc  <  1:433788/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CATGTAAGATCTGATATTGAGATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACAGGATGCGGCGTAAAATGCCTTATCCGGCATTAAACTCCCAACAGGACACACTCATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGAAC  >  NC_000913_3_hsa_tpiA/2347137‑2347432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.