Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 4,111,662 G→A L179L (CTG→TTG)  yiiQ ← DUF1454 family putative periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,111,6620GA99.1% 370.3 / NA 114L179L (CTG→TTG) yiiQDUF1454 family putative periplasmic protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (60/53);  minor base C (0/1);  total (60/54)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

AAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATC  >  NC_000913_3_hsa_tpiA/4111518‑4111807
                                                                                                                                                |                                                                                                                                                  
aaGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTACTCGATTAAACAGCGAAGGTCAACCCCt                                                                                                                                               >  1:270408/1‑150 (MQ=255)
 aGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCtt                                                                                                                                              >  1:787377/1‑150 (MQ=255)
 aGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCtt                                                                                                                                              >  1:997428/1‑150 (MQ=255)
   gAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCtttt                                                                                                                                            >  2:284789/1‑150 (MQ=255)
         ggCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGt                                                                                                                                      >  2:29325/1‑150 (MQ=255)
          gccgccCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGtt                                                                                                                                     <  2:860298/150‑1 (MQ=255)
           ccgccCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTg                                                                                                                                    <  1:732886/150‑1 (MQ=255)
              ccccGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑cc                                                                                                                                <  1:29325/150‑1 (MQ=255)
                ccGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑Ccgc                                                                                                                              >  1:347116/1‑150 (MQ=255)
                 cGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑Ccgcg                                                                                                                             >  1:346590/1‑150 (MQ=255)
                 cGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑Ccgcg                                                                                                                             >  2:675076/1‑150 (MQ=255)
                  gCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGa                                                                                                                            <  2:418838/150‑1 (MQ=255)
                  gCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGa                                                                                                                            <  2:748203/150‑1 (MQ=255)
                    aGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAATCCCTTTTCGCCGTTTT‑TCGCGaca                                                                                                                          >  2:380552/1‑150 (MQ=255)
                      ggCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGacaac                                                                                                                        >  2:32034/1‑150 (MQ=255)
                      ggCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGacaac                                                                                                                        >  2:696608/1‑150 (MQ=255)
                                 tgtgAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTg                                                                                                             >  2:436229/1‑150 (MQ=255)
                                 tgtgAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTg                                                                                                             >  1:1041572/1‑150 (MQ=255)
                                 tgtgAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTg                                                                                                             <  1:921182/150‑1 (MQ=255)
                                   ggAAATATTACAGAAATTCACCGGCACAAAGGCTTTGCTTTTGGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCCGTTTACCAGCGAATGTTAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCa                                                                                                           <  2:196959/149‑1 (MQ=255)
                                      aaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCt                                                                                                        >  1:164310/1‑150 (MQ=255)
                                       aCAGTATAGCGATTCATCGGCACAAAGGTTTTGCTTTTTGTAATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCtt                                                                                                       <  2:379481/150‑1 (MQ=255)
                                       aCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCtt                                                                                                       <  1:308311/150‑1 (MQ=255)
                                        cAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTc                                                                                                      <  2:413107/150‑1 (MQ=255)
                                         agcttatagagTCACCGCCACAACGGTTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCt                                                                                                     <  1:144894/143‑1 (MQ=255)
                                         aGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCt                                                                                                     <  2:167787/150‑1 (MQ=255)
                                         aGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCt                                                                                                     <  1:1029894/150‑1 (MQ=255)
                                              agagATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGtctc                                                                                                >  1:424769/1‑150 (MQ=255)
                                               gcgttagaTCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCg                                                                                               <  2:771389/143‑1 (MQ=255)
                                               gagaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCg                                                                                               <  2:1095555/150‑1 (MQ=255)
                                                 gaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAATCTTCATGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGCTCAACCCCTTTTCGCCGTTGC‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgt                                                                                             <  2:1167401/150‑1 (MQ=255)
                                                       tCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCt                                                                                                     >  1:38296/1‑136 (MQ=255)
                                                       tCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCt                                                                                                     <  2:38296/136‑1 (MQ=255)
                                                       tCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGtaata                                                                                       >  2:36972/1‑150 (MQ=255)
                                                         ctcacaAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAAc                                                                                     <  1:1135385/148‑1 (MQ=255)
                                                          gCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACg                                                                                    >  2:925350/1‑150 (MQ=255)
                                                          gCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACg                                                                                    >  1:1023704/1‑150 (MQ=255)
                                                          gCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGCTGCACTAAct                                                                                    >  2:923932/1‑149 (MQ=255)
                                                            acaAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAGCgtt                                                                                  >  1:347713/1‑150 (MQ=255)
                                                            acaAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTAAAACTTTTTTTGCC‑TGGTGCCACCACAACATAACGCAGTGCACCTTCTGTCTCGTTGTAATAACgag                                                                                  >  2:1135385/1‑148 (MQ=255)
                                                             ccaaGGCCTTGCTGTTTGTCAATTATTAAAACCGTTAAGCTTTTCAGATAGCCCCAGCTTATTCGGTCCAACAGCGAAGGGCCACCCCTTTCCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACgttt                                                                                 <  2:351162/148‑1 (MQ=255)
                                                             caAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACgttt                                                                                 <  1:199203/150‑1 (MQ=255)
                                                              aaaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACTCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACgtttt                                                                                >  2:949717/1‑149 (MQ=255)
                                                                aGGCTTTGCTTTTTGTCATTTATTCATACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGTCAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACgtttgtt                                                                              <  1:1068447/150‑1 (MQ=255)
                                                                 gtcgttgcattTTGTCAATTATTCAAAACGTCAAGCTTTTTTTATAGCTCCTGCTTAATCGGTTCAACAACGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGGCTCGGTGTAATAACgtttgttt                                                                             <  2:524082/146‑1 (MQ=255)
                                                                   ctttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGttttt                                                                           <  1:459277/150‑1 (MQ=255)
                                                                     ttgctttTTGTCATTTATTCAGACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTcc                                                                         >  2:1040102/1‑150 (MQ=255)
                                                                         ttgttGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccgc                                                                     <  2:346590/147‑1 (MQ=255)
                                                                           tttGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCccgccg                                                                   <  1:36972/150‑1 (MQ=255)
                                                                            ttGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGATCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCATCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGt                                                                  >  2:127231/1‑150 (MQ=255)
                                                                            ttGGCATTAATTAAGACCTTCAACCGATTTAAATAGCGCCAGTTTAACCGGTTAAAAAACGAAGGTGAACCTCTTTTCGCCCTTGT‑CTGCGACATTATAACGCGGTGCCCCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGt                                                                  <  2:45665/150‑1 (MQ=255)
                                                                               tCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATTACGTTTGTTTTTCCCCGCCGTtag                                                               >  2:1018731/1‑150 (MQ=255)
                                                                               tCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtag                                                               >  2:217679/1‑150 (MQ=255)
                                                                                 aTTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtagta                                                             >  1:1112817/1‑150 (MQ=255)
                                                                                 aTTTATTCAAACCTTCAAGCGATTCAGATAGAGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATACCGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTTCTTTTCCCCTCGTTtagta                                                             >  2:554076/1‑150 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTc                                                                                                      <  1:602465/108‑1 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTc                                                                                                      >  2:602465/1‑108 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTACTAACGTTTGTTTTTCCCCGCCGTtagtag                                                            >  1:1100310/1‑150 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAAc                                                                                     <  1:402287/125‑1 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAAc                                                                                     >  2:402287/1‑125 (MQ=255)
                                                                                  tttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTtagtag                                                            >  1:305646/1‑150 (MQ=255)
                                                                                   ttATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCCTtagtttc                                                           >  2:944265/1‑147 (MQ=255)
                                                                                      ttCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAAGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGAc                                                        >  1:774504/1‑150 (MQ=255)
                                                                                        cAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTg                                                      <  1:436229/150‑1 (MQ=255)
                                                                                         aaaCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGCTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGc                                                     >  1:900702/1‑150 (MQ=255)
                                                                                          aaCCTTCAAGCTATTCATGTCGCGCCAGCTTAAGCGGTTCAACTGCGAAGGTCAACCCCTTTTCGCCGTAGT‑CCGCGACAACATACCGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCa                                                    <  2:928598/150‑1 (MQ=255)
                                                                                          aaCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGt                                                                                                                                      >  2:97415/1‑69 (MQ=255)
                                                                                          aaCCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCCCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCa                                                    >  2:176445/1‑150 (MQ=255)
                                                                                             cTTCATGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAATGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGCGCAGCTTCTGTCTCGGAGTAATAACGTTTGTCTTTCCCCGCCGTTAGTAGCGACTGCAGtt                                                 <  1:998099/150‑1 (MQ=255)
                                                                                               tCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGtttt                                               <  1:32034/150‑1 (MQ=255)
                                                                                                  aGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGttttttt                                            >  1:79089/1‑149 (MQ=255)
                                                                                                   gCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATGACGTTTGTTTTTCGAGGCCGTTAGTAGCGACTGAAGgtttttgt                                           >  1:301129/1‑148 (MQ=255)
                                                                                                      aTTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTta                                                                <  1:651045/126‑1 (MQ=255)
                                                                                                           gATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgt                                   >  2:817894/1‑150 (MQ=255)
                                                                                                            aTAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTAGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCCTtgtc                                  >  2:291981/1‑149 (MQ=255)
                                                                                                             tAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCNCCGTTAGTAGNGNCNGCAGCTTTTTCTTGCGTTgtgt                                 >  1:905569/1‑150 (MQ=255)
                                                                                                               gcggCAGCTTCATAGGGTCAAATGCGAACGAAAACTTCTTTTTGCCGTTTT‑CAGCGACAACATAACGCGGTGCACCTTCTGTCTCGGTGTAATATCGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGttt                               <  2:1002672/150‑1 (MQ=255)
                                                                                                                cgcCAGCTTAATCGGTTCAACGGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGtttt                              <  1:677447/150‑1 (MQ=255)
                                                                                                                 gcCCGCTTAATCCGGTCCACAGCGAAGGTCACCCCCCTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATTACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTg                             <  1:554076/150‑1 (MQ=255)
                                                                                                                   cgggttAATCGGTTCAACAGCGAAGGTACACCCCTTTTCCTTGTTGT‑CCGTGACAACATAACGCAGTGCACCTTCTGTCCCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGt                           <  2:203720/146‑1 (MQ=255)
                                                                                                                   cAGCTTAATCGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCGTTGGGTTTTGGt                           >  1:508939/1‑150 (MQ=255)
                                                                                                                           tgtgTTAAACAGTGAAGGTTCACCCCTTTTCGCGCTTGC‑CCGCTAGAACTTAACTCAGTGCTCCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATg                   <  2:904936/147‑1 (MQ=255)
                                                                                                                            cGGTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATgg                  <  1:209906/150‑1 (MQ=255)
                                                                                                                             ggTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCTGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATggg                 <  2:347116/150‑1 (MQ=255)
                                                                                                                             ggTTCAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATggg                 <  1:359094/150‑1 (MQ=255)
                                                                                                                               ttCAACAGCGAACGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATACCGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGt               <  1:521200/150‑1 (MQ=255)
                                                                                                                                 cAACAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGa             <  1:629248/150‑1 (MQ=255)
                                                                                                                                   aCAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgt                                                                                             <  2:627714/68‑1 (MQ=255)
                                                                                                                                   aCAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgt                                                                                             >  1:627714/1‑68 (MQ=255)
                                                                                                                                   aCAGCGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAgt           >  1:410139/1‑150 (MQ=255)
                                                                                                                                       caaaGGTCAACCCCTCTTCGCCGTTGT‑CCGCGAAAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGc       <  1:247584/148‑1 (MQ=255)
                                                                                                                                       cGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCt                                           <  2:15288/114‑1 (MQ=255)
                                                                                                                                       cGAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCt                                           >  1:15288/1‑114 (MQ=255)
                                                                                                                                        gAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGCCTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCg      >  2:727062/1‑150 (MQ=255)
                                                                                                                                        gAAGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCg      <  1:185882/150‑1 (MQ=255)
                                                                                                                                          aGGTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTTATTATGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGa    >  1:224241/1‑150 (MQ=255)
                                                                                                                                           ggTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgtg                                  >  1:537935/1‑119 (MQ=255)
                                                                                                                                           ggTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTtgtg                                  <  2:537935/119‑1 (MQ=255)
                                                                                                                                            gTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATc  >  1:275014/1‑150 (MQ=255)
                                                                                                                                            gTCAACCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGGGAGTGTTCGGATc  >  1:1042339/1‑150 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
AAGGAAGATGGCCGCCCCGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGT‑CCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAATAACGTTTGTTTTTCCCCGCCGTTAGTAGCGACTGCAGTTTTTTCTGGCTTTGTGTTTTGGTCATTAATGGGGTGAGTGTGCGGATC  >  NC_000913_3_hsa_tpiA/4111518‑4111807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑