New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_hsa_tpiA | 1611571 = | 45 (0.750) | 6 (0.100) | 6/274 | 7.5 | 9.9% | coding (284/948 nt) | yneF | putative membrane‑bound diguanylate cyclase |
? | NC_000913_3_hsa_tpiA | 1611609 = | 66 (1.130) | coding (246/948 nt) | yneF | putative membrane‑bound diguanylate cyclase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGA > NC_000913_3_hsa_tpiA/1611435‑1611719 | cTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTCGTCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTa < 1:199328/149‑1 (MQ=255) aTTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGCCGAACCGACCGAGATACCAATCCCCCAATCTCCCACCAGTACGAt > 2:158151/1‑149 (MQ=255) gCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTcc > 1:226779/1‑149 (MQ=255) gCGAACTGATCGCTGGCATGTTAAAAGAAACCATAAACGGTTATATCGCCGGCGTGGCAATACCGAGACGTGCGGAGAACATTTTTTTTTTTAATGATACGGCG‑ACC‑ACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTcc < 2:306923/149‑1 (MQ=255) cGCTGCCACGCTAAAAGAAACCATAAGTGGGCATATCACCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCgg < 1:295397/149‑1 (MQ=255) gCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGt < 2:548859/149‑1 (MQ=255) aCGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTCCGCTTTCCACCGCACCGATGAaaaa > 2:429683/1‑149 (MQ=255) ccacaaaaGCAACCCTCATGGGTAATATCGCCATTGTGGGAATACCTAGACGTGCGGAGAACTTTTGCTGTTTTAA‑GG‑ACAGCGCACCCACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAg < 2:872357/145‑1 (MQ=255) cGCTAAAAGAACCCATAAGTGGGCATATCGCCATTGTGGCAATACCGAGACGTGCGGAGAACATTTTTTTATTGAA‑TA‑ACGCCGAGACGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAg < 2:140462/149‑1 (MQ=255) gCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCACACCGGTGACAAAgg > 1:98597/1‑149 (MQ=255) aaaGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGTGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCGCCGCACCGGTGACAAAGGTCaa > 1:142105/1‑149 (MQ=255) aaGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAAc > 2:829720/1‑149 (MQ=255) cATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTTCGGAGAACATTTTCGGAATGGA‑AA‑ACAGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACAATTTCAACCCCACCGGTGACAAAGGTCAACAGACATg > 1:286481/1‑149 (MQ=255) ttGGGCCTATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTAcc < 1:823855/149‑1 (MQ=255) gggCATTTTGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTg < 2:295735/149‑1 (MQ=255) atatCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc < 1:60345/149‑1 (MQ=255) tCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGta > 1:292561/1‑149 (MQ=255) ccATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAg > 1:535060/1‑149 (MQ=255) gTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCAc > 1:1036986/1‑149 (MQ=255) ggCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTg < 1:829720/149‑1 (MQ=255) aaTACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGGGACAAAGGTCAACAGACATATTACCTGCGGCGTATAGCGCACTGcac > 1:1011280/1‑149 (MQ=255) gTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAAt < 2:982612/149‑1 (MQ=255) cGGAGAACATTTGTGTAATTGA‑GA‑ACACAGAAACCAGCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGAACCGGGGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATgca < 2:620463/149‑1 (MQ=255) ggAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATgcag > 1:591581/1‑149 (MQ=255) gagaACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTTCAGCGTATACCGCACCGCACACAACATTAATgcagg > 1:760748/1‑149 (MQ=255) aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCCCACAAGGTTGATGCAGGCAGCgg > 1:127772/1‑149 (MQ=255) aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTaa > 1:108684/1‑137 (MQ=255) aTTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTaa < 2:108684/137‑1 (MQ=255) gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc > 2:140618/1‑107 (MQ=255) gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTgcggc < 1:140618/107‑1 (MQ=255) gCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAACCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAAc < 1:236694/149‑1 (MQ=255) aaTGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCa < 2:1036986/149‑1 (MQ=255) tGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGa < 2:535060/149‑1 (MQ=255) agCGAACCGAACGAGATATAAATCACCGAATTAGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGc < 2:628347/148‑1 (MQ=255) gAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCCGGAACGCCAGACTACCCGCTca > 1:314642/1‑148 (MQ=255) accgaccgAGATATCAATCTCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGc < 2:168135/149‑1 (MQ=255) accgaccgAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGAACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTCTAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGCCTCCCCGCTCCGc > 2:176766/1‑149 (MQ=255) aacgaGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAAt < 1:80635/147‑1 (MQ=255) gagaTATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCTCTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGAc < 1:437723/149‑1 (MQ=255) agaTATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACCCCCCGCCCCGCCAACGACt > 2:553731/1‑149 (MQ=255) caatcaCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAg < 1:657817/149‑1 (MQ=255) atcaCCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGc < 1:266535/149‑1 (MQ=255) ccGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATa > 2:192470/1‑149 (MQ=255) cGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATaa > 1:356252/1‑149 (MQ=255) gAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAAc < 2:356252/149‑1 (MQ=255) tttGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGa < 2:795141/149‑1 (MQ=255) | CTTCATTAGCGAATTGATCGCTGCCACGCTAAAAGAAACCATAATTGGGCATATCGCCATCGTGGCAATACCGAGACGTGCGGAGAACATTTGCGGAATGGA‑GA‑ACGGCGAACCGACCGAGATATCAATCACCGAATTTGCCACCAGTACGATTTCCACCGCACCGGTGACAAAGGTCAACAGACATGTTACCTGCGGCGTATAGCGCACTGCACACCAGATTAATGCAGGCAGCGGGAACGCCAGACTCCCCGCTCCGCCAATGACTACCGAGGCAATAACCGA > NC_000913_3_hsa_tpiA/1611435‑1611719 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |