New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 2375824 =15 (0.250)58 (0.990) 47/274 0.3 79.9% coding (139/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913_3_hsa_tpiA = 2515613 NA (NA)intergenic (+170/+30) insL1/yfeA IS186 transposase/putative diguanylate cyclase

Only 100 of 157 total aligned reads displayed.

TCTGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCC  >  NC_000913_3_hsa_tpiA/2375676‑2375972
                                                                                                                                                    |                                                                                                                                                    
acgggaatctggagattacaggtgcccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatg                                                                                                                                                      >  2:209127‑M1/149‑149 (MQ=255)
 tggtgatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgg                                                                                                                                                     >  1:587881‑M1/148‑149 (MQ=255)
 tggtcatctggagcttacaggtggccatacgtgggacagtaaccgtgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgg                                                                                                                                                     >  1:198440‑M1/148‑149 (MQ=255)
 cTGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCCCACTTTGCGCCTCTTCCCAGGTTTCCTGACTGCAGCCCGGCAGTggc                                                                                                                                                     >  2:921319/1‑148 (MQ=255)
 cTGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTggg                                                                                                                                                     <  1:381188/149‑1 (MQ=255)
  tGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTgg                                                                                                                                                      >  2:298952/1‑147 (MQ=255)
  tGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTgg                                                                                                                                                      <  1:298952/147‑1 (MQ=255)
   gtcagctggagattacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattctgcagatggttcaacccttaagttagcgcttatGGga                                                                                                                                                   >  1:715969‑M1/146‑149 (MQ=255)
   gTCAGTTCGTCCAATGCACAGCTTACGCGACAGGCCAGGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGga                                                                                                                                                   <  1:141653/149‑1 (MQ=255)
       gTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCGGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGAtc                                                                                                                                               >  1:924376/1‑149 (MQ=255)
        ttCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTTGGGAGAttt                                                                                                                                              >  2:357264/1‑147 (MQ=255)
        ttCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGAtct                                                                                                                                              >  2:746838/1‑149 (MQ=255)
        ctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgg                                                                                                                                                     <  2:609009‑M1/2‑1 (MQ=255)
        ctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgg                                                                                                                                                     >  1:609009‑M1/141‑142 (MQ=255)
           tGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCC                                                                                                                                           <  1:970665‑M1/149‑1 (MQ=255)
           gagcttacaggtggccatgcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGagatcttcc                                                                                                                                           >  1:488189‑M1/138‑146 (MQ=255)
                   cacaGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcg                                                                                                                                   >  1:372988‑M1/1‑142 (MQ=255)
                    ggtggccattcgtgggacaggatccctgacagcctacaaaacgcaattgaagaacgcgatgcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCtt                                                                                                                                  >  1:200875‑M1/129‑149 (MQ=255)
                    acaGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgc                                                                                                                                  >  1:157268‑M1/1‑141 (MQ=255)
                     gtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTc                                                                                                                                 <  2:613092‑M1/22‑1 (MQ=255)
                     caGCTTACGCCAAAGGCCAGGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACGGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgct                                                                                                                                 <  2:394243‑M1/149‑10 (MQ=255)
                     caGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgct                                                                                                                                 >  1:774589‑M1/1‑140 (MQ=255)
                        tccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTcgcg                                                                                                                              >  1:538651‑M1/125‑149 (MQ=255)
                        gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggctcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTcgcg                                                                                                                              <  1:992262‑M1/25‑1 (MQ=255)
                        cTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCACGCAGCACACTTTGCGCCTCTTCCCAGGTTGCCTGACTGAAGCCCTGGAGTGGGGAGATCTCGCCattagcgctacc                                                                                                                              >  2:691975‑M1/1‑137 (MQ=255)
                             gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCCGTGGGGAGATCTCCCCataagcgctaacttaag                                                                                                                         >  2:680960‑M1/1‑132 (MQ=255)
                             gCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaag                                                                                                                         >  1:787866‑M1/1‑132 (MQ=255)
                              ccAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagg                                                                                                                        <  2:774589‑M1/149‑19 (MQ=255)
                                  ggaagggatcccggacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCa                                                                                                                    >  2:125040‑M1/115‑149 (MQ=255)
                                   ggCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgt                                                                                                                   <  2:247894‑M1/149‑24 (MQ=255)
                                    gCCACGGAAGGCATCTTCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAATCCCGGGAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtg                                                                                                                  <  2:492312‑M1/149‑25 (MQ=255)
                                      cACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggt                                                                                                                >  1:1033004‑M1/1‑123 (MQ=255)
                                        tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAgg                                                                                                              >  1:958746‑M1/109‑149 (MQ=255)
                                          gAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtatta                                                                                                            >  2:793894‑M1/1‑119 (MQ=255)
                                            cctgacagccgacaaaacgcaatctaagagcgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCaaa                                                                                                          >  1:911486‑M1/105‑149 (MQ=255)
                                              gCATCCGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcc                                                                                                        <  2:718906‑M1/149‑35 (MQ=255)
                                                 tCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGAt                                                                                                                                                >  2:86047/1‑106 (MQ=255)
                                                 tCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGAt                                                                                                                                                <  1:86047/106‑1 (MQ=255)
                                                 tCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctga                                                                                                     >  1:886703‑M1/1‑112 (MQ=255)
                                                 cagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATAc                                                                                                     >  1:857170‑M1/100‑149 (MQ=255)
                                                   gcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAg                                                                                                   <  1:160739‑M1/52‑1 (MQ=255)
                                                     ctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTc                                                                                                                                 >  1:862398‑M1/96‑117 (MQ=255)
                                                      tacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGccc                                                                                                >  1:613092‑M1/95‑149 (MQ=255)
                                                      ggTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCC                                                                                                                                            <  1:1007170‑M1/105‑1 (MQ=255)
                                                           aacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttacgttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACCCAGGCAAACATCCAGCCCgtccc                                                                                           <  2:511235‑M1/60‑3 (MQ=255)
                                                             cgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCgg                                                                                         >  2:952334‑M1/88‑149 (MQ=255)
                                                                aaTCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatattatttatcgtgc                                                                                      <  2:924376‑M1/149‑53 (MQ=255)
                                                                    gCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgat                                                                                  <  2:676017‑M1/149‑57 (MQ=255)
                                                                     aagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTaa                                                                                 <  1:81203‑M1/70‑1 (MQ=255)
                                                                       tGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgttcccgtgac                                                                               >  2:655665‑M1/1‑90 (MQ=255)
                                                                       gaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAAcc                                                                               >  1:854262‑M1/78‑149 (MQ=255)
                                                                       gaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAAcc                                                                               >  1:427702‑M1/78‑149 (MQ=255)
                                                                        gccagccaGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaat                                                                              <  1:633880‑M1/149‑61 (MQ=255)
                                                                         caagccatttATTTACCCAGGCAAGCAGTACACTTTGCGCCTCTTCCCAGGTTTCCGGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaatt                                                                             <  2:307958‑M1/147‑62 (MQ=255)
                                                                            gccagTTATTTACCCAGGCAAGCAGCACACTTTGCACCTCCTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCCCCCCaaaagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                          <  1:577724‑M1/149‑65 (MQ=255)
                                                                              cagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactct                                                                        <  2:547790‑M1/149‑67 (MQ=255)
                                                                               agTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaatttctctc                                                                       >  2:942523‑M1/1‑82 (MQ=255)
                                                                                 ttATTTGCCCAGGCAAGCAGCACATTTTGCGCCTCTTCCCAGGTTTCTTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                     <  2:1010025‑M1/149‑70 (MQ=255)
                                                                                 ttATTTACCCAGGCAAGCAGCACACTTTGCGCCTCATCCCAGGGTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                     <  1:707944‑M1/149‑70 (MQ=255)
                                                                                   tcgtcttaacgaggcaccgaggcgtcgcattcttcagatggaacaacccttaagttcgcgcttgtTGGGGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACACCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCa                                                                   <  2:760972‑M1/84‑1 (MQ=255)
                                                                                   aTTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacga                                                                   <  2:157268‑M1/149‑72 (MQ=255)
                                                                                     ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggt                                                                                                                <  2:164787‑M1/102‑27 (MQ=255)
                                                                                      tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGaa                                                                <  2:745288‑M1/87‑1 (MQ=255)
                                                                                       aCCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCCGTGGGGCGATCTCCCCctaagcgctaactcaagggttgtggcattccgcctggtatgattcaacgtgcccatgatttactctcacaatacc                                                               >  2:96370‑M1/1‑74 (MQ=255)
                                                                                       aCCCAGGCAAGCAGCACACGTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataac                                                               <  2:24948‑M1/149‑76 (MQ=255)
                                                                                        ttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAacc                                                              <  1:236656‑M1/89‑1 (MQ=255)
                                                                                         ccatggcagcagcacactttTCGCCTCTTCCCATGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactg                                                             <  2:1017539‑M1/142‑78 (MQ=255)
                                                                                         ccAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactg                                                             >  1:521893‑M1/1‑72 (MQ=255)
                                                                                           aGGCAAGCAGCACACTTTGGCCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggt                                                           <  1:409520‑M1/149‑80 (MQ=255)
                                                                                                     gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGc                                                                             <  1:1051237‑M1/74‑1 (MQ=255)
                                                                                                     gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGc                                                                             >  2:1051237‑M1/48‑121 (MQ=255)
                                                                                                     cacaCTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatattatttaacgtgccgaggaattactctcacgataacttggtagcaattct                                                 >  2:462739‑M1/1‑60 (MQ=255)
                                                                                                      acacGTGGCGCCGTTGCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTACCCagaagcgctaacttaagggttctggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctg                                                <  2:433604‑M1/149‑91 (MQ=255)
                                                                                                        gcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGga                                                                                                                                                   >  2:950912‑M1/45‑48 (MQ=255)
                                                                                                        gcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGga                                                                                                                                                   <  1:950912‑M1/4‑1 (MQ=255)
                                                                                                        gcgtcgcattcttcagatggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATgg                                              >  1:317694‑M1/45‑149 (MQ=255)
                                                                                                        acTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                              <  2:521893‑M1/149‑93 (MQ=255)
                                                                                                        acTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                                <  2:870181‑M1/131‑75 (MQ=255)
                                                                                                         cTTTGCGCCTCGTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaacgactgcggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcc                                             <  1:312019‑M1/149‑94 (MQ=255)
                                                                                                              cgcTTCTTCCCAGGTTTCCTGACTGAAGCCCGGTAGTGGGGAGATCTCCTCataagtgctaatttaagggttgtggtattacgcctgatatgattttacgtgccgatgaattactctcacgataactggtcagcaattctggcccatat                                        <  1:428583‑M1/149‑99 (MQ=255)
                                                                                                              cattcttcatatggttcaacccttaagttagcgcttagGGGAGATCTCCCCCCATCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCt                                        >  1:814429‑M1/39‑149 (MQ=255)
                                                                                                               gcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCatcagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatatt                                       >  2:17999‑M1/1‑50 (MQ=255)
                                                                                                                 ctctTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattgg                                     >  1:441359‑M1/1‑48 (MQ=255)
                                                                                                                       ccAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcc                               >  2:794352‑M1/1‑42 (MQ=255)
                                                                                                                       ccAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcc                               >  1:714005‑M1/1‑42 (MQ=255)
                                                                                                                       ccAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactcccacgataactggtcagcaattctggcccatattggtaagcc                               >  1:263658‑M1/1‑42 (MQ=255)
                                                                                                                        atggttcaacccttaagttagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGta                              >  2:858206‑M1/29‑149 (MQ=255)
                                                                                                                              tCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaa                        <  1:330770‑M1/149‑115 (MQ=255)
                                                                                                                               ccTGACTGAAGCCCGGGAGTGGGGAGATCTCCCAataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaac                       <  2:367034‑M1/149‑116 (MQ=255)
                                                                                                                                   actgaAGCCCGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgga                   <  1:793894‑M1/149‑120 (MQ=255)
                                                                                                                                    ctgaAGCGCGGGGGTGGGGAGATCTCCCCattagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggat                  <  2:372988‑M1/149‑121 (MQ=255)
                                                                                                                                        aGCCCGGCAGTGGGGAGATCCCCCCataagcgctaacttaagggttgtggtagtacgcctgatatgatttaacgtgtcgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatactt              <  2:575784‑M1/149‑125 (MQ=255)
                                                                                                                                          tagcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCAt            >  1:746054‑M1/11‑149 (MQ=255)
                                                                                                                                          cccGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg                    >  2:937377‑M1/1‑23 (MQ=255)
                                                                                                                                           ccGGCAGTGGGGAGATCTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcgg           >  2:685814‑M1/1‑22 (MQ=255)
                                                                                                                                            gcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTa          >  1:348670‑M1/9‑149 (MQ=255)
                                                                                                                                            gcgcttatGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTa          <  1:967120‑M1/141‑1 (MQ=255)
                                                                                                                                              gCAGTGGGGGGATTTCCCCataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcac        <  2:415503‑M1/149‑131 (MQ=255)
                                                                                                                                                    GGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATGCAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCAGGGGGATCTGCCAGCGGTATACCTGCGCGCTCCGCCTTACGGATTcc  <  2:256519‑M1/149‑1 (MQ=255)
                                                                                                                                                    GGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACACCCCCGCCCATGGGGATCTGCCAGCCGTATACATGCGCGCTACGCCTTACGGATTcc  <  1:464977‑M1/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCTGTCAGTTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCC  >  NC_000913_3_hsa_tpiA/2375676‑2375972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.