Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913_3_hsa_tpiA 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_hsa_tpiA 257908–258674 258683 10–776 61 [0] [1] 63 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 2579070 (0.000)58 (1.020) 48/266 0.2 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913_3_hsa_tpiA 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTC  >  NC_000913_3_hsa_tpiA/258538‑258832
                                                                                                                                                  |                                                                                                                                                     
cttgtgttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                                     <  2:199006‑M2/3‑1 (MQ=255)
      ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagctgattgatcaaaaaatttaccgctctaggcccgtatattcgtgaaggtaAGTG‑CAAAg                                                                                                                                              >  2:452964‑M2/141‑149 (MQ=255)
          aaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATaa                                                                                                                                          <  2:688933‑M2/13‑1 (MQ=255)
           aatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAgatgat                                                                                                                                         >  1:361086‑M2/136‑149 (MQ=255)
           aatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAAt                                                                                                                                         <  2:373720‑M2/14‑1 (MQ=255)
                  taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaagaaataaaccgcactatgcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCt                                                                                                                                  >  1:30993‑M2/129‑149 (MQ=255)
                     cttttcccaatttcgtaaaacagttgcctcacaacaggagatagcaaggacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCtttt                                                                                                                               <  1:54147‑M2/24‑1 (MQ=255)
                      ttttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgactttaccgagttgacacccgcagagcagattgatcaaaaaatttaccgcactaggcccgtatattactgaaggtaAGTG‑AAAAGATACTTAATTAttttt                                                                                                                              >  1:209479‑M2/125‑149 (MQ=255)
                      gtctgccaatttggtaaaacagttgcatcacaacaggatatagcaatgacgcaccctattggacacccgaagagcagattgatcaaaaaatttaccgcactcggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCttttt                                                                                                                              <  2:386481‑M2/25‑1 (MQ=255)
                            caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttactgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTg                                                                                                                        >  2:979829‑M2/119‑149 (MQ=255)
                                    taaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTg                                                                                                                >  1:1057888‑M2/111‑149 (MQ=255)
                                     aaaacagttggatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGt                                                                                                               <  2:888858‑M2/40‑1 (MQ=255)
                                        acagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagcttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaGGGC‑CAAAGGTAATCGATTCTGTTTCCAATGCTTGGCTCTATg                                                                                                            >  1:359189‑M2/107‑149 (MQ=255)
                                           gttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaaaagcagattgatcagaaaatttaccgcactaggcccgtatattcgtgaatttaATTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGt                                                                                                         >  2:330415‑M2/104‑149 (MQ=255)
                                            ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaattgaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc                                                                                                        <  1:979829‑M2/47‑1 (MQ=255)
                                              gcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagcgcagttttgtcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCaa                                                                                                      >  1:837572‑M2/101‑149 (MQ=255)
                                               catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                                     <  1:967377‑M2/50‑1 (MQ=255)
                                                 ttctaacaggagatagaaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGt                                                                                                   <  2:1057888‑M2/52‑1 (MQ=255)
                                                  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAGGATAATCGATTCTTCTTCGATTGTCTGGCTGTATGCGTCAACGTg                                                                                                  <  1:841627‑M2/53‑1 (MQ=255)
                                                  cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTg                                                                                                  >  1:122266‑M2/97‑149 (MQ=255)
                                                          gagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGc                                                                                          >  1:619336‑M2/89‑149 (MQ=255)
                                                            aatagcaactacgattctgagtggacaccggaatggcagattgattaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGTTGTATGCGTCAACGTGGAACCGGCAc                                                                                        <  2:318104‑M2/63‑1 (MQ=255)
                                                                  aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAg                                                                                  >  1:1037293‑M2/81‑149 (MQ=255)
                                                                       cgtgaccgagtggacaccgtaagagcagattgagcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                             <  2:777965‑M2/74‑1 (MQ=255)
                                                                        gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgttaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTg                                                                            >  1:1450‑M2/75‑149 (MQ=255)
                                                                           accgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAt                                                                         >  1:303903‑M2/72‑149 (MQ=255)
                                                                           accgagtggacacccgaagagcagactgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAt                                                                         <  1:1045967‑M2/78‑1 (MQ=255)
                                                                            ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGGGCGGGAAtt                                                                        >  2:520176‑M2/71‑149 (MQ=255)
                                                                             cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGc                                                                               >  1:606212‑M2/70‑141 (MQ=255)
                                                                             cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGc                                                                               <  2:606212‑M2/72‑1 (MQ=255)
                                                                                   gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGATGTATGCGTGAACGTGAAACCTGCACCGTAAGTGCGTGAATTCTGGGGc                                                                 >  2:743255‑M2/64‑149 (MQ=255)
                                                                                     cacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtg                                                               <  1:1058458‑M2/88‑1 (MQ=255)
                                                                                        ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtg                                                            >  1:857176‑M2/59‑149 (MQ=255)
                                                                                         cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                           >  1:473121‑M2/58‑149 (MQ=255)
                                                                                             gagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgg                                                       >  1:674485‑M2/54‑149 (MQ=255)
                                                                                                cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGc                                                    >  1:819222‑M2/51‑149 (MQ=255)
                                                                                                 agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                                   <  2:619336‑M2/100‑1 (MQ=255)
                                                                                                  gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                                  <  2:122266‑M2/101‑1 (MQ=255)
                                                                                                   attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                                   >  1:1041374‑M2/48‑147 (MQ=255)
                                                                                                   attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                                   <  2:1041374‑M2/100‑1 (MQ=255)
                                                                                                   attgatcaaaaaatttaccgcactaggcacgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTgg                                                 >  1:99249‑M2/48‑149 (MQ=255)
                                                                                                        tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcg                                            <  2:353934‑M2/107‑1 (MQ=255)
                                                                                                          aaaacattgcccgcactagccctgtatattcgtgaagggaAGTG‑CAAAGATAATCGATTCGTGTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          <  2:360697‑M2/109‑1 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtgg                                                              <  2:747707‑M2/89‑1 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtgg                                                              >  1:747707‑M2/41‑129 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGTAGCTGGAGGCGCa                                          >  2:357833‑M2/41‑149 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          >  1:1060149‑M2/41‑149 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          >  2:968852‑M2/41‑149 (MQ=255)
                                                                                                          aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          >  2:338929‑M2/41‑149 (MQ=255)
                                                                                                          aaaaaattgaacgcacgagggccgtagattcaggaaggtaAGTG‑CAAATATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          <  2:209479‑M2/109‑1 (MQ=255)
                                                                                                           aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCGGAAAGCGCAg                                         >  2:302546‑M2/40‑149 (MQ=255)
                                                                                                           aaaaaatttaccgcactaggcccgtatattcgtgaaggtAGTGTCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                          <  2:113145‑M2/110‑1 (MQ=255)
                                                                                                                    ccgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGACTCTCGGTGGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGt                                <  1:569560‑M2/119‑1 (MQ=255)
                                                                                                                     cgcactaggcccgtatattcgtggagttgGGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGGGCTGGAAGCGCGGGGATCCCGtt                               >  2:716645‑M2/30‑149 (MQ=255)
                                                                                                                     cgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt                               >  2:336310‑M2/30‑149 (MQ=255)
                                                                                                                     cgcactaggcccgtatattcgtgaaggtaAGTG‑CAAAGAGAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt                               <  1:654917‑M2/120‑1 (MQ=255)
                                                                                                                                   atattcgtgaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc                 <  1:594139‑M2/134‑1 (MQ=255)
                                                                                                                                       tcgggaaggtaAGTG‑CAAATATTATCGTTTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCTCCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGTAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGt             <  2:777549‑M2/138‑1 (MQ=255)
                                                                                                                                          tGAAGGTAAGTG‑CAAAGATAATCGATTCTTTTTCGACAAACTGGCTCGCCGCGTCAACGTGACCCTCGCTTGATGATTGCGTGAGATGGCGGCCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg          <  1:786542/149‑1 (MQ=255)
                                                                                                                                           gaaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTgg         >  1:630533‑M2/8‑149 (MQ=255)
                                                                                                                                            aaggtaAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt        <  1:981882‑M2/143‑1 (MQ=255)
                                                                                                                                                 aAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGtt   <  1:512957‑M2/148‑1 (MQ=255)
                                                                                                                                                  aGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTc  <  2:1037293/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTG‑CAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTC  >  NC_000913_3_hsa_tpiA/258538‑258832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.