New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 3423823 =NA (NA)11 (0.190) 9/270 6.0 15.8% intergenic (‑36/+57) rrfD/rrlD 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon
?NC_000913_3_hsa_tpiA = 3946688 61 (1.010)intergenic (+81/‑12) rrlC/rrfC 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC  >  NC_000913_3_hsa_tpiA/3946542‑3946836
                                                                                                                                                  |                                                                                                                                                     
gCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga                                                                                                                                                     >  2:23100/1‑149 (MQ=33)
  cGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaaa                                                                                                                                                   <  1:953057/149‑1 (MQ=35)
         gtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAtt                                                                                                                                            >  2:508133/1‑149 (MQ=35)
          tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAttt                                                                                                                                           <  2:1006392/149‑1 (MQ=35)
            aGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGc                                                                                                                                         <  2:1055317/149‑1 (MQ=35)
               gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGGGAGAAGATTTTCAGCCTGATAAAGATTAAATAAGAACGCAGATGCGGCCTGTTGAAACAAAATTTGACTg                                                                                                                                      >  1:321284/1‑149 (MQ=11)
                 aGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACCCCGCCGAAGATGTTTTGGCGGGTGAGAGAAGGTTTTCAGCCTGATCCAGATTAAATCAGAACGCAAAAGCGGTCTTATGAAACAGAATTTGCCTggc                                                                                                                                    >  2:524992/1‑149 (MQ=11)
                   cGATGCGTTGAGCTAACCGGTACTAATGCACTGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAGCAGAATTTGCCTggcgg                                                                                                                                  <  1:158492/149‑1 (MQ=255)
                         gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAg                                                                                                                            >  2:876845/1‑149 (MQ=35)
                         gTTGAGCTAACCGGTACTAATGAACCGGGAGGCTTAACCTTACAACGCCGAAGATGGTTTGGCGGAGGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATCTGCCTGGCCGCCGTAg                                                                                                                            >  2:1040300/1‑149 (MQ=11)
                             aGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGcgcg                                                                                                                        <  1:876845/149‑1 (MQ=35)
                              tcTAACCGGTACAAATGAACCGTGAGGCTTAACGTTACAACGCCGAAGATGTTTTGGCTGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCgg                                                                                                                       <  2:679331/148‑1 (MQ=255)
                              gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCgg                                                                                                                       <  2:679661/149‑1 (MQ=35)
                               cTAACCGGTACTAATGATCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggt                                                                                                                      <  2:745683/149‑1 (MQ=25)
                                  aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt                                                                                                                   >  2:219092/1‑149 (MQ=35)
                                   ccGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc                                                                                                                  >  2:119977/1‑149 (MQ=35)
                                    cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc                                                                                                                 >  1:1024117/1‑149 (MQ=35)
                                    cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTAGCGGCCGTAGCGCGGTGGTcc                                                                                                                 >  1:714364/1‑149 (MQ=25)
                                    cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGCTTTGGCGGCTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCTGACGTAGCCCGGTGGTcc                                                                                                                 >  1:1013881/1‑149 (MQ=11)
                                     ggTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTccc                                                                                                                >  2:340659/1‑149 (MQ=34)
                                       tACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc                                                                                                              <  2:823824/149‑1 (MQ=35)
                                         cTAATGAACGGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGGGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCt                                                                                                            <  2:308066/149‑1 (MQ=21)
                                           aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGGCTGGCGGCCGTAGCGCGGTGGGCCCACCTGa                                                                                                          >  1:132190/1‑149 (MQ=21)
                                           aaTGAACCGTGAGGCTAAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGa                                                                                                          <  2:679103/149‑1 (MQ=25)
                                                   tggAGGCGTAACCTTACAAGGCGGATTATGTTTTGGCGGATGAGAGAAGATATTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATGTGCCGGGCGGCCGTAGCGAGGGGGTCCCACCTGACCCCATGc                                                                                                  <  2:123583/147‑1 (MQ=11)
                                                    tGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc                                                                                                 >  1:276034/1‑149 (MQ=35)
                                                              ccTTACAAAGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCTGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa                                                                                       <  1:458237/149‑1 (MQ=21)
                                                               cTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATCCAGATTAAATCAGAGCGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCCCCTGACCCCATGCCGAACTCAGGAg                                                                                      >  1:167870/1‑149 (MQ=255)
                                                               cTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAg                                                                                      >  1:966857/1‑149 (MQ=35)
                                                                   cAACGCCGAAGATGTTTTGGCGGAGGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa                                                                                  <  1:465944/149‑1 (MQ=21)
                                                                     aCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc                                                                                <  1:1016550/149‑1 (MQ=35)
                                                                         cgtaGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGGCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg                                                                            <  1:484013/146‑1 (MQ=25)
                                                                                gTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGcc                                                                     <  1:508133/149‑1 (MQ=32)
                                                                                    tggtggATTAGAGATGATTTTAAGACTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATg                                                                <  2:676461/149‑1 (MQ=11)
                                                                                    tGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATg                                                                <  1:219092/149‑1 (MQ=32)
                                                                                       cGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGTGGTCTGATGAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTa                                                             <  2:345369/149‑1 (MQ=17)
                                                                                        ggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAAAGAAACACCGTAGCGCCGATGGTaa                                                            >  1:131444/1‑148 (MQ=12)
                                                                                              gagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg                                                      <  1:696901/149‑1 (MQ=32)
                                                                                              gagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTggg                                                      <  1:262144/149‑1 (MQ=32)
                                                                                              gagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCAAGCCCAGCTCAAATGTGAAACGCCGTAGCGCCGATGGTAGTGTggg                                                      >  1:827875/1‑149 (MQ=11)
                                                                                                 aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGTGGtc                                                   >  2:796899/1‑149 (MQ=17)
                                                                                                 aagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGGGTgggggc                                                   >  1:375736/1‑147 (MQ=17)
                                                                                                  agaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGgct                                                  >  2:631539/1‑149 (MQ=17)
                                                                                                                        tAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACt                            <  1:740711/149‑1 (MQ=32)
                                                                                                                        tAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACt                            >  1:168302/1‑149 (MQ=32)
                                                                                                                           aTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGcc                         >  2:596944/1‑149 (MQ=32)
                                                                                                                           aTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATAGAAGTGTGGGGCCTCCCCATGCGAGAGTAGGGAACTGcc                         >  2:706054/1‑149 (MQ=12)
                                                                                                                            tCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa                        <  2:443116/149‑1 (MQ=32)
                                                                                                                            tCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa                        >  1:443116/1‑149 (MQ=32)
                                                                                                                            tCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGGGGTCCCACCGGACCCCATGCCGAACTCAGAAGGGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACGGCCa                        >  2:4277/1‑149 (MQ=255)
                                                                                                                                          gggTCTGATGAAACAGAATTTGCCTGGCCGCCGTCGCGCGGTGGTCCCACCTGACCCCCTGCCGAACTCAGAAGTGAAAGGCCTTAGCGCCGGTGGCAGTGTGGGCTCCCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg          <  2:121941/148‑1 (MQ=11)
                                                                                                                                          cGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg          <  1:604477/149‑1 (MQ=32)
                                                                                                                                           ggTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGc         >  1:1032121/1‑149 (MQ=32)
                                                                                                                                            gTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCa        >  2:53846/1‑149 (MQ=32)
                                                                                                                                             tCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGCAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCAAGAGTAGGGAAATGCCAGGCAGCAAAtcacgaaa       >  2:358968/1‑142 (MQ=11)
                                                                                                                                              cTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAGGCGAGAGAAGGGAACTGCCAGGCATCAAATTAAGCAGt      <  1:631539/149‑1 (MQ=17)
                                                                                                                                                gatgaAACAGAATTTGCCTGGCGGCCCCACCGCCGGGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCGAGGCATCAAATTAAGCAGTaa    >  1:528798/1‑149 (MQ=11)
                                                                                                                                                 atgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGCTAGAAAGCGTTGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAg   >  1:248496/1‑149 (MQ=11)
                                                                                                                                                 atgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAg   >  2:437411/1‑149 (MQ=32)
                                                                                                                                                 atgaAACAGAATTTGCCTGGCGGCCATAGCGCGGCGGTCCCACCTGACCCCATGCCGAACTCAGAAGGGAAACGCCGTAGCGCCGATGGTACTGTGGGGCCTCCCCATGCGAGAGGAGGGAACTACCAGGCAACAAATTAAGCAGTAAg   >  2:40843/1‑149 (MQ=11)
                                                                                                                                                  tgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGc  >  1:531199/1‑149 (MQ=31)
                                                                                                                                                  |                                                                                                                                                     
GCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC  >  NC_000913_3_hsa_tpiA/3946542‑3946836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.