New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	1805292 =	33 (0.670)	5 (0.100)	5/276	6.3	12.6%	intergenic (+20/+33)	yniD/ydiY	uncharacterized protein/acid‑inducible putative outer membrane protein
	?	NC_000913_3_hsa_tpiA	1805317 =	37 (0.760)					intergenic (+45/+8)	yniD/ydiY	uncharacterized protein/acid‑inducible putative outer membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGACTAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTC  >  NC_000913_3_hsa_tpiA/1805169‑1805465                                                                                                                                                     |                                                                                                                                                     cGACTAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCa                                                                                                                                                      <  1:56888/149‑1 (MQ=255)       aaCGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCatatctc                                                                                                                                                <  2:604815/149‑7 (MQ=255)            tttGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTAc                                                                                                                                           >  1:492565/1‑149 (MQ=255)               gATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATg                                                                                                                                        >  1:267647/1‑149 (MQ=255)                 tAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCt                                                                                                                                      >  1:52782/1‑149 (MQ=255)                             gAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGa                                                                                                                          >  1:270644/1‑149 (MQ=255)                               aGATGGTGGTGGTGCTACTCGGAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACCCGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGGTa                                                                                                                        >  2:322646/1‑149 (MQ=255)                                    gtggtggtgCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGtt                                                                                                                   >  2:652950/1‑149 (MQ=255)                                                     aaTCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATg                                                                                                  >  1:464463/1‑149 (MQ=255)                                                       tcaggggCGCCATTATGTTGCTACTTCGGGCAGCAATGATTTGGAGCTGAGCAGGGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCTGTATGtt                                                                                                <  2:107536/144‑1 (MQ=255)                                                                cTAGGTTGTTGCTACGTTGGGCAGCACTGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAg                                                                                       >  2:416845/1‑149 (MQ=255)                                                                       gttgCTACGTTGGGCAGGAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCAGGCAGATAATTTTACATGCTGTAGCCAAGCGATAAGGTTGTTCTACGGTCGGTATGTTCCGGTGCAGACTCTgg                                                                                <  2:289252/149‑1 (MQ=255)                                                                        ttgCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               <  2:651384/149‑1 (MQ=255)                                                                        ttgCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               >  1:786539/1‑149 (MQ=255)                                                                         tgatagcttGGGCAGCAAGGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAg                                                                              <  2:394640/142‑1 (MQ=255)                                                                           cTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               >  1:336773/1‑146 (MQ=255)                                                                           cTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               <  2:336773/146‑1 (MQ=255)                                                                                        caATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCAtg                                                               >  2:467509/1‑149 (MQ=255)                                                                                           tGATTGGGGGCGGAGGAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGa                                                            <  2:106982/149‑1 (MQ=255)                                                                                               ttGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGtt                                                        <  2:447380/149‑1 (MQ=255)                                                                                               ttGGGGCTGAGCAGGGACAAACGAAGCCAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGtt                                                        <  1:257776/149‑1 (MQ=255)                                                                                                   ggcggggCAGTGACAAACGAGGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTaa                                                    <  2:666140/143‑1 (MQ=255)                                                                                                     cTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAt                                                                                                                         <  1:27933/78‑1 (MQ=255)                                                                                                     cTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGAt                                                                                                                         >  2:27933/1‑78 (MQ=255)                                                                                                           aGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCtt                                            <  2:790038/149‑1 (MQ=255)                                                                                                           aGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCAGTATGTTCCGGTGCAGAGCCTGCAATTTGATATGTCCATGTGACGTTGTAAGCCACCtt                                            <  2:840532/149‑1 (MQ=255)                                                                                                                 aaaCGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTcc                                      >  2:297860/1‑149 (MQ=255)                                                                                                                 aaaCGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGGATGTTCCGGTGCAGACTCTGGCGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTcc                                      >  1:269079/1‑149 (MQ=255)                                                                                                                         aCAGCCAGACCGCATAACGCGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGtt                              <  1:138944/149‑1 (MQ=255)                                                                                                                          cAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTc                             <  1:509450/149‑1 (MQ=255)                                                                                                                                 aCCGTAAAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATa                      <  2:346473/149‑1 (MQ=255)                                                                                                                                  ccGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               >  2:684742/1‑91 (MQ=255)                                                                                                                                  ccGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGa                                                                               <  1:684742/91‑1 (MQ=255)                                                                                                                                     cATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCaa                  <  2:492565/149‑1 (MQ=255)                                                                                                                                     cATAACACGGTCCGGCAGATAATTGTACATGCTGGAGCCCAGCGATAAGGTGGTCCGACGGTCGGTATGTGCCGGGGCAGACTCTGGAGGCTCAGGGTTCCATGTGACGTTGTAAGCCGCCGTCAGTCCAAAAAGTTCATTAGTTGCaa                  >  2:106760/1‑149 (MQ=255)                                                                                                                                         acacGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACAtt              <  2:270644/149‑1 (MQ=255)                                                                                                                                             ggTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAAt          >  1:441589/1‑149 (MQ=255)                                                                                                                                                 tggCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATgcgc      <  2:970/148‑1 (MQ=255)                                                                                                                                                  ggCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAATTGTTCATTAATAGCACGATTTAATGCGCt     >  1:184856/1‑149 (MQ=255)                                                                                                                                                   gCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCAt                                                                <  2:175808/89‑1 (MQ=255)                                                                                                                                                   gCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCAt                                                                >  1:175808/1‑89 (MQ=255)                                                                                                                                                   gCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCtt    >  2:276907/1‑149 (MQ=255)                                                                                                                                                     aGATAATTTGACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTc  <  1:297860/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGACTAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTC  >  NC_000913_3_hsa_tpiA/1805169‑1805465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.