Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_hsa_tpiA	223838–224771	225480–224838	68–1643	19 [18]	[18] 19	[rrsH]–ileV	[rrsH],ileV

GTCCACTCAGGCCTACCAAATTTGCACG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACT  >  NC_000913_3_hsa_tpiA/225440‑225629                                           |                                                                                                                                                       ggccatgcAGGCCTATCAAATTTGCAAG‑GCAAATTTGGAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TTAGCTGGGAGAGCGTCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGt                                           <  2:191110/142‑1 (MQ=11) gTCCACTCAGGCCTACCAAATTTGTACG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGt                                           >  1:487327/1‑149 (MQ=14)       tCAGGCCTACCAAATTTGCACG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaata                                     >  1:175793/1‑149 (MQ=32)              tACCAAATTTGCACG‑GCAGAATTTAAGAGGTTTTAACTAAATGTGAAAGGAAAATCGCCATCAGCT‑TGAGAAC‑CTTGCTATGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATa                              >  2:836325/1‑149 (MQ=2)                tcAAATTTGC‑CGTGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGCCTGCGGTCCGGTCCCGCTTAGCTCCACCACCTCTGTAGTGGTTAAATAAAAAATACt                            >  2:403205/2‑149 (MQ=11)                 cAAATTTGCACG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACtt                           <  1:139376/149‑1 (MQ=32)                     tttGCACG‑GCAAATTTGAATAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTACAGCATCTCTGTACTGGTTAAATAAAAAATACTTCaga                       <  2:368125/149‑1 (MQ=255)                          aCG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAgtgtc                  >  1:517554/1‑148 (MQ=17)                            g‑gCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACtt                           <  2:154530/138‑1 (MQ=33)                            g‑gCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACtt                           >  1:154530/1‑138 (MQ=32)                                aaaTTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTTGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGc             >  1:223424/1‑149 (MQ=17)                                 aaTTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCa            <  1:540372/149‑1 (MQ=32)                                  aTTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCaa           >  1:37212/1‑149 (MQ=32)                                     tGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAgg        <  1:172422/149‑1 (MQ=32)                                         gagGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGc             <  1:284029/140‑1 (MQ=33)                                         gagGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGc             >  2:284029/1‑140 (MQ=33)                                         gagGTTTAAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGCAACGAACCCCCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCa    <  2:702974/149‑1 (MQ=11)                                          agGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGGTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCAc   >  1:204676/1‑149 (MQ=17)                                           ggTTTTAACTACATGTTATCGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACTCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACt  <  1:825477/149‑1 (MQ=17)                                           |                                                                                                                                                       GTCCACTCAGGCCTACCAAATTTGCACG‑GCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGC‑‑TCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACT  >  NC_000913_3_hsa_tpiA/225440‑225629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑