New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 1228752	51 (1.220)	4 (0.100)	4/264	5.3	8.2%	intergenic (+14/‑63)	ycgM/ycgN	putative isomerase/hydrolase/UPF0153 family cysteine cluster protein
	?	NC_000913_3_hsa_tpiA	= 1228759	42 (1.080)					intergenic (+21/‑56)	ycgM/ycgN	putative isomerase/hydrolase/UPF0153 family cysteine cluster protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGCTTATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/1228596‑1228752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgccgccGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAAAAA  <  NC_000913_3_hsa_tpiA/1228759‑1228613                                                                                                                                                                                                                                                                                                                  TCGCTTATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCTCCTTTTGTAATACTTT                                                                                                                                                             >  2:126427/1‑149      TATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCC                                                                                                                                                        <  1:88562/149‑1                                                     AGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGA                                                                                                                   >  1:523489/1‑139                                                     AGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGA                                                                                                                   <  2:523489/139‑1                                                         ACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCCGCTTTCAGGCGGCAAAAAGTATTAC                                                                                                                            >  1:290281/1‑126                                                         ACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCCGCTTTCAGGCGGCAAAAAGTATTAC                                                                                                                            <  2:290281/126‑1                                                                                                                                                    TTTTGCCGCAGCTTCCAGTCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGG          <  1:454369/149‑1                                                                                                                                                     TTTGCCCCCGCTTTCAGGCGGCAAAAAGTATTACAAACCGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGG         <  2:598792/149‑1                                                                                                                                                         CCGCCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCNGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAA     >  1:691067/1‑149                                                                                                                                                          CGCCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAAA    >  2:109879/1‑149                                                                                                                                                           GCCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAAAA   >  2:247567/1‑149                                                                                                                                                            CCGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAAAAA  >  2:666737/1‑149                                                                                                                                                                                                                                                                                                                  TCGCTTATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAATACTTTTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/1228596‑1228752 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgccgccGCTTTCAGGCGGCAAAAAGTATTACAAAACGCGAGTTGTCAAAGAATGCCCATCGAAAGTGACTGTCAGCTCATCACCGCTTTGCAACGGGCCGACGCCATCAGGCGTGCCTGTCAACACAACGTCACCGGCCTTGAGGGTAAAAAA  <  NC_000913_3_hsa_tpiA/1228759‑1228613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.