New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1207790 =11 (0.150)62 (0.970) 51/254 0.2 83.4% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA 1209619 = 15 (0.240)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 174 total aligned reads displayed.

GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_tpiA/1207643‑1207937
                                                                                                                                                   |                                                                                                                                                   
gcctccggcacagttcagcggattacgttgtagatctgtgttctggtcatttgttgatacgcgtacagagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                                    >  1:151385‑M1/148‑149 (MQ=255)
 gagCCTGGTGGAGGCATTCGTGGCCAGCCTGAGTAAGGGGGGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  1:652487‑M1/148‑1 (MQ=255)
 cggggtggtggagtCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGAACGGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  2:458504‑M1/145‑1 (MQ=255)
     gtggtgGAGGCAGCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTT                                                                                                                                               <  1:581526‑M1/149‑1 (MQ=255)
     ctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                               >  1:227037‑M1/143‑149 (MQ=255)
      tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                                                                              <  1:403435‑M1/149‑1 (MQ=255)
      tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                              <  1:795592‑M1/8‑1 (MQ=255)
       ggtggAGGCACTCGGTGCCCGCCTGGAGCAGGGGCGGAACGCCCAGTTACTTGCCGCACTTCGCGCGCTGCTGTTATGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                             <  2:1128748‑M1/149‑1 (MQ=255)
         tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCGCTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGg                                                                                                                                           >  1:552775‑M1/1‑148 (MQ=255)
         tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGTATCGGTTTGGCGATATCAACTGGTATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                           <  2:1194381‑M1/149‑1 (MQ=255)
         tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTGGGTTTGGGA                                                                                                                                           >  2:14274‑M1/1‑149 (MQ=255)
              gCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                      <  1:107526‑M1/149‑1 (MQ=255)
                agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAg                                                                                                                                    <  1:93150‑M1/18‑1 (MQ=255)
                agcgcattacgttgtagatctgtgttctggtcatttgttgataagagtacatggccaataagtatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcgttttcataagcgTTGGTTTGTGAgaagtag                                                                                                                                    <  1:69054‑M1/18‑4 (MQ=255)
                agcgcattacgtagtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttccttttcataaacgTTGgttttggagcaagag                                                                                                                                    <  2:580578‑M1/18‑7 (MQ=255)
                 tCCGGTGCCAGCATGGAGAGGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGGAAGCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctc                                                                                                                                   <  2:1198480‑M1/149‑4 (MQ=255)
                  ccGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                  <  1:107045‑M1/149‑5 (MQ=255)
                  ccGGGGCCAGGCGGGGGGAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                  <  2:544258‑M1/149‑5 (MQ=255)
                         cgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                           >  1:1002057‑M1/123‑149 (MQ=255)
                         cggtgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                           <  2:983595‑M1/27‑1 (MQ=255)
                         cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                           >  1:223230‑M1/1‑138 (MQ=255)
                            ccTGGGGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg                                                                                                                        >  2:1079623‑M1/1‑135 (MQ=255)
                              tagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                      >  1:888690‑M1/118‑149 (MQ=255)
                              tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                      <  1:327071‑M1/149‑17 (MQ=255)
                               ggAGAAGGGGCGGCACGAACAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAAGctctgcattacctgttg                                                                                                                     >  1:774141‑M1/1‑132 (MQ=255)
                                 atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTAGATTGCGACAAGGACCAAAAACAAATgcagca                                                                                                                   <  2:171612‑M1/35‑1 (MQ=255)
                                   ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                 <  2:122176‑M1/37‑1 (MQ=255)
                                     ggggCGGCACGACGAGGTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                               <  2:241691/149‑1 (MQ=255)
                                      tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                              >  1:122176‑M1/110‑149 (MQ=255)
                                        ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                            <  1:715980‑M1/42‑1 (MQ=255)
                                        tactggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCTa                                                                                                            >  1:1210668‑M1/108‑149 (MQ=255)
                                         tctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                           >  1:983595‑M1/107‑149 (MQ=255)
                                          ctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                          >  1:471679‑M1/106‑149 (MQ=255)
                                            ggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgt                                                                                                                                                     >  2:369666‑M1/104‑104 (MQ=255)
                                             aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                                                                       >  2:871763‑M1/1‑118 (MQ=255)
                                                atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcatcaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                    >  2:1240317‑M1/100‑149 (MQ=255)
                                                atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTTCCTGCAGCAACGGCTACATTaggg                                                                                                    <  2:329011‑M1/50‑2 (MQ=255)
                                                atttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgattgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGGTACATTAGGa                                                                                                    <  1:1001829‑M1/50‑1 (MQ=255)
                                                  cAGTTACTTACCGCCCTTCGCGCGCTGCTGTTACGGCAGAAGAATCGTGTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                                  <  1:546406‑M1/149‑37 (MQ=255)
                                                    gTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattaactgttggtgtcccggttccgtggcctt                                                                                                >  1:370196‑M1/1‑111 (MQ=255)
                                                      tagttaccgcACTTCGCGCGCTGATGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                              <  1:182699‑M1/146‑41 (MQ=255)
                                                        cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGGTATCAATTCGGATGGGACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGAAGAAGGctctgcattacctgttggtgtcccggtcccgtggccttctgc                                                                                            >  1:241533‑M1/1‑107 (MQ=255)
                                                          tacCGCACTTCGCGCGCGGCTGGTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGTATTGACCTGTACAAGTGTCTTTCGAAGTCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcca                                                                                          <  2:313277‑M1/149‑45 (MQ=255)
                                                            gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                        <  2:709273‑M1/62‑1 (MQ=255)
                                                            gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                        <  2:196963‑M1/62‑1 (MQ=255)
                                                             cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                       >  2:729799‑M1/87‑149 (MQ=255)
                                                             cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                       >  1:12334‑M1/87‑149 (MQ=255)
                                                             cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactc                                                                                       <  2:749973‑M1/149‑48 (MQ=255)
                                                               tacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                     >  2:795592‑M1/85‑149 (MQ=255)
                                                                 cttagctaataagcatgttaaattcccctggtaaaagcaggaatgatgccatttgcttgtgatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                   >  2:863382‑M1/83‑149 (MQ=255)
                                                                        aatatgcaggttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                            >  1:733024‑M1/76‑149 (MQ=255)
                                                                           tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccgctccgccaacgggctgg                                                                         >  2:355801‑M1/1‑88 (MQ=255)
                                                                           tgctgTTAAGCCGCAAGAATCCGTGTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccatggccttcagccactccgccaacaggctgg                                                                         <  1:590099‑M1/149‑62 (MQ=255)
                                                                             gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt                                                                       <  2:670798‑M1/79‑1 (MQ=255)
                                                                                 gttaagtccccctggtaaaagcaggaatgatgccatttgtttgttatttctttattttcataaacgTTGGTTTGGGAGAGGGAGCAAAACTCAATGCAGCAACGGCCACACTAGGACGCACCCGTTTCATCTCTACACCGGTTATGAtt                                                                   >  2:923676‑M1/67‑149 (MQ=255)
                                                                                 gttaaatccccctggtaaaagcaggaatgatgccatttgctttttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                             <  1:297823‑M1/9‑1 (MQ=255)
                                                                                  aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaacaggctggctgaaat                                                                  >  2:1026326‑M1/1‑81 (MQ=255)
                                                                                  aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctacattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                                  >  2:897218‑M1/1‑81 (MQ=255)
                                                                                   taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                 >  1:196963‑M1/65‑149 (MQ=255)
                                                                                       gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat                                                             <  1:852726‑M1/149‑74 (MQ=255)
                                                                                        cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                     <  2:61731‑M1/92‑18 (MQ=255)
                                                                                        cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                     >  1:61731‑M1/1‑75 (MQ=255)
                                                                                            ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaactTTGGTTTGGGAGAATGAGCAAAACTCAATGCAGCAACGGCTACATGAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATtgc                                                        >  2:943678‑M1/56‑148 (MQ=255)
                                                                                            cgtgtaaaagaaggaatgatgtcatttgctttgtatttcttcatattacaaaacgTTGATGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCGACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                        >  2:1005857‑M1/56‑149 (MQ=255)
                                                                                             tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                               <  1:574009‑M1/55‑1 (MQ=255)
                                                                                             tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                               >  2:574009‑M1/55‑109 (MQ=255)
                                                                                              tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                      <  2:817992/149‑1 (MQ=255)
                                                                                                    tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttttt                                                <  1:834663‑M1/149‑87 (MQ=255)
                                                                                                       aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAACAACGGCTACATTAGGACGAACCGGTTTCATAGCTATACCGGTTATGATGGGTGGTATTGAGCAATCAGTaa                                             <  2:826629‑M1/105‑1 (MQ=255)
                                                                                                            tCAAATCGGATGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                        <  1:108870/149‑1 (MQ=255)
                                                                                                              atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                               >  2:656545‑M1/38‑92 (MQ=255)
                                                                                                              aaaTCGTATGGCAGTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaaga                                      <  1:879020‑M1/149‑97 (MQ=255)
                                                                                                              aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttctgccactccgccaacaggctggctgaaatgcaatgatgccgctttttctgctgaagc                                      >  2:978235‑M1/1‑53 (MQ=255)
                                                                                                               aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                     <  2:89378‑M1/149‑98 (MQ=255)
                                                                                                               aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                        <  2:716018‑M1/114‑63 (MQ=255)
                                                                                                                 tgggatGGCGCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                   <  2:20135‑M1/147‑100 (MQ=255)
                                                                                                                 tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                   <  1:871763‑M1/149‑100 (MQ=255)
                                                                                                                  catttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                  >  2:946856‑M1/34‑149 (MQ=255)
                                                                                                                    tttgcgtgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                >  1:1061088‑M1/32‑149 (MQ=255)
                                                                                                                      tgccACTGGGTAAACGGCTTCCGAACACCGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                              <  1:329667/146‑1 (MQ=255)
                                                                                                                                ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                    >  1:432608‑M1/20‑149 (MQ=255)
                                                                                                                                ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                    <  1:659401‑M1/130‑1 (MQ=255)
                                                                                                                                cAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                    <  1:641286‑M1/149‑115 (MQ=255)
                                                                                                                                cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaa                    <  2:840477‑M1/149‑115 (MQ=255)
                                                                                                                                 aaaCGGCTCTCGAACACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgatgccgctttttctactgaagaatacccggaactggcaaag                   >  2:30303‑M1/1‑34 (MQ=255)
                                                                                                                                 aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaag                   >  1:1210250‑M1/1‑34 (MQ=255)
                                                                                                                                  cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGTTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                  <  1:898444‑M1/132‑1 (MQ=255)
                                                                                                                                  cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                  <  2:494706‑M1/132‑1 (MQ=255)
                                                                                                                                   ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCAACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATAGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCgcaga                 <  1:1100122‑M1/133‑3 (MQ=255)
                                                                                                                                   aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgtccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                 >  1:462127‑M1/1‑32 (MQ=255)
                                                                                                                                     ggCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAg               >  1:508906/1‑149 (MQ=255)
                                                                                                                                        tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt            >  1:500729‑M1/12‑149 (MQ=255)
                                                                                                                                         ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc           >  1:154562‑M1/1‑26 (MQ=255)
                                                                                                                                            gAAAACCTTGTTTTGGGAGTAGGAGCATTACTGAATTCAGCAACAGAAGGCCTGAGAGCCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGGGCAAGCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc        <  1:349737/149‑1 (MQ=255)
                                                                                                                                            gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac        >  1:709486‑M1/1‑23 (MQ=255)
                                                                                                                                            gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc                                                                            <  2:930196‑M1/81‑59 (MQ=255)
                                                                                                                                            gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc                                                                            >  1:930196‑M1/1‑23 (MQ=255)
                                                                                                                                              aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                             >  2:597477‑M1/6‑110 (MQ=255)
                                                                                                                                                  gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg  <  2:1107560‑M1/148‑1 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa  >  2:1150626‑M1/1‑17 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_hsa_tpiA/1207643‑1207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.