New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 1207790 =8 (0.120)55 (0.910) 49/246 0.2 89.4% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA 1209619 = 6 (0.100)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

ATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC  >  NC_000913_3_hsa_tpiA/1209473‑1209765
                                                                                                                                                  |                                                                                                                                                  
agaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGt                                                                                                                                                  >  1:1088321‑M2/147‑149 (MQ=255)
    gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgccttgagttttgctccttctcccaaaccaaCGTTTAt                                                                                                                                              >  2:1197927‑M2/143‑149 (MQ=255)
    gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgccttgagttttgatccttctcccaaaccaaCGTTTAt                                                                                                                                              >  2:1150306‑M2/143‑149 (MQ=255)
     cagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATg                                                                                                                                             >  2:296617‑M2/142‑149 (MQ=255)
         tgcttttgcggcagtccacccccactgaatgtttactgattgctcaatacctccaatcataaccggtatagctatgaaaccggtgcgtcttaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                         <  1:2838‑M2/12‑1 (MQ=255)
                  ggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                                                                >  2:83299‑M2/129‑149 (MQ=255)
                  ggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                                                                <  2:1184738‑M2/21‑1 (MQ=255)
                      ttccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACa                                                                                                                            <  2:854673‑M2/25‑1 (MQ=255)
                       tccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                           <  1:296617‑M2/26‑1 (MQ=255)
                         cacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGc                                                                                                                         <  1:1172055‑M2/28‑1 (MQ=255)
                                actgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctccccaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                                                                  >  1:815909‑M2/115‑149 (MQ=255)
                                  tggatgattacggagtgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                                <  2:539050‑M2/37‑1 (MQ=255)
                                     atgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatcat                                                                                                             >  2:894867‑M2/110‑149 (MQ=255)
                                        attactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                          <  1:949392‑M2/43‑1 (MQ=255)
                                         ttactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAGATGGCATCATTCCt                                                                                                         >  2:1188146‑M2/106‑149 (MQ=255)
                                         ttactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                         >  1:1206262‑M2/106‑149 (MQ=255)
                                               attgctcaataccaccaatcataacaggtatatctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                                                                   >  2:748379‑M2/100‑149 (MQ=255)
                                                  gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                                                                                                <  1:234746‑M2/53‑1 (MQ=255)
                                                   ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGTATCATTCCTGCTTTTACCa                                                                                               <  2:1020658‑M2/54‑1 (MQ=255)
                                                   ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCa                                                                                               >  2:790711‑M2/96‑149 (MQ=255)
                                                   ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCa                                                                                               <  1:1126513‑M2/54‑1 (MQ=255)
                                                            accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt                                                                                      >  1:181863‑M2/87‑149 (MQ=255)
                                                            acagatcatgaccggtatatgtatgaaaccggtgcgtcgtaatgtagccgttgattgattgagttttgctccttcgcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt                                                                                      <  2:928103‑M2/63‑1 (MQ=255)
                                                               aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                                   >  1:213218‑M2/84‑149 (MQ=255)
                                                                atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                  <  2:622359‑M2/67‑1 (MQ=255)
                                                                 tcataaccggtatagctatgaaaccggggcgtcctaatgtagccgttgctgcattgagttttgctcctgctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATCCCTGCTTTTACCAGGGGGATTTAACAt                                                                                 <  2:485359‑M2/68‑1 (MQ=255)
                                                                   ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                               >  2:676558‑M2/80‑149 (MQ=255)
                                                                   ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                                                               <  2:1088321‑M2/70‑1 (MQ=255)
                                                                    taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                            <  2:1200131‑M2/57‑1 (MQ=255)
                                                                    taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                            >  1:1200131‑M2/79‑135 (MQ=255)
                                                                      accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                            >  1:323428‑M2/77‑149 (MQ=255)
                                                                         gcaatagcaatgaaaccggtgcgtacaaatgtagccgttgctgcattgagttttactcctccccccaaaccaaCAATAATGAAAATGAAGAAATAACAAGCAAATGGCATCAATCCTGCTTTTACCAGGGGGATTTAACATGCATATTg                                                                         <  2:1111347‑M2/76‑1 (MQ=255)
                                                                            atagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                 <  1:414804‑M2/68‑1 (MQ=255)
                                                                            atagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                 >  2:414804‑M2/71‑138 (MQ=255)
                                                                                  ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTCCCAGGGGGATTTAACATGCTTATTGGCTCTGTAc                                                                >  1:62926/1‑149 (MQ=255)
                                                                                  atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                                                                <  2:213218‑M2/85‑1 (MQ=255)
                                                                                    gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                              <  2:950917‑M2/87‑1 (MQ=255)
                                                                                           gttcgtcctaatgtagccggtgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCTTCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                       <  2:438237‑M2/94‑1 (MQ=255)
                                                                                            tgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac                                                      <  1:748379‑M2/95‑1 (MQ=255)
                                                                                                tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                  >  1:1144820‑M2/51‑149 (MQ=255)
                                                                                                 cctaatgtagccgttgctgcattgagttttgcttcttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGAAAATGACATCATTCCTGCTCTTACCAGGGGGATTTAACATGATTCTTGGCTGTGGACGCGTATAAACGAATg                                                 >  2:856864‑M2/50‑149 (MQ=255)
                                                                                                 cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                        >  1:1057633/1‑110 (MQ=255)
                                                                                                 cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                        <  2:1057633/110‑1 (MQ=255)
                                                                                                   cGGAACCGGGACACCAACAGGTAATGAAGAACCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                               <  2:1129666/149‑1 (MQ=255)
                                                                                                    aatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGCACATGTAGTAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAcc                                              <  1:283657‑M2/103‑1 (MQ=255)
                                                                                                      tgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAATCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                                                                    <  2:353436‑M2/65‑1 (MQ=255)
                                                                                                      tgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                                                                    >  1:353436‑M2/45‑109 (MQ=255)
                                                                                                          gggAGACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAGGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                        <  2:300207/149‑1 (MQ=255)
                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                          >  1:35592‑M2/40‑82 (MQ=255)
                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                          <  2:35592‑M2/43‑1 (MQ=255)
                                                                                                           ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac                                       <  2:474456‑M2/110‑1 (MQ=255)
                                                                                                              ttgctgcattgagttttgctccttctccccaaccatCCTATATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGa                                    <  1:532129‑M2/113‑1 (MQ=255)
                                                                                                               acCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAATTGACCAGAACACCGAt                                   >  2:1002606/1‑149 (MQ=255)
                                                                                                                  tgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAACCAGATCTa                                >  2:771887‑M2/33‑149 (MQ=255)
                                                                                                                     attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                             <  2:323428‑M2/120‑1 (MQ=255)
                                                                                                                     attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                             <  1:790711‑M2/120‑1 (MQ=255)
                                                                                                                      ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAAAAACCAAATGGCATCATTCATGCTTTTACCAGGGGGATTTAACATAATTATTGGCTATTTACGCGTCTTAACATATGACTATAACAACTATCTAcaaa                            >  2:884857‑M2/29‑148 (MQ=255)
                                                                                                                                ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                          >  2:410053‑M2/19‑125 (MQ=255)
                                                                                                                                ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                          <  1:410053‑M2/107‑1 (MQ=255)
                                                                                                                                ctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCt                  <  2:1193509‑M2/131‑1 (MQ=255)
                                                                                                                                 tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACAAGAACACAGATCTACAACGTGATGCGCTg                 >  2:651164‑M2/18‑149 (MQ=255)
                                                                                                                                    ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                                <  1:72577‑M2/101‑1 (MQ=255)
                                                                                                                                    ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                                >  2:72577‑M2/15‑115 (MQ=255)
                                                                                                                                    ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc              >  2:13328‑M2/15‑149 (MQ=255)
                                                                                                                                         ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                   <  1:116788‑M2/98‑1 (MQ=255)
                                                                                                                                         ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                   >  2:116788‑M2/10‑107 (MQ=255)
                                                                                                                                         ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATAACCAGAACACTAATCTACAACGTAATGCGCTgaactatac         >  1:1037887‑M2/10‑145 (MQ=255)
                                                                                                                                          caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa        <  1:238536‑M2/141‑1 (MQ=255)
                                                                                                                                          caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAAACAGATGTCCAACGTACTGCGCTgaactgagaa        >  2:229676‑M2/9‑145 (MQ=255)
                                                                                                                                           aaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAACGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAg       >  2:1069104‑M2/8‑149 (MQ=255)
                                                                                                                                              ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGAt    >  1:302009‑M2/5‑149 (MQ=255)
                                                                                                                                               caaCGTTTAGGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGTTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATg   <  2:1024634‑M2/146‑1 (MQ=255)
                                                                                                                                                aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGc  <  2:302009‑M2/147‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
ATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC  >  NC_000913_3_hsa_tpiA/1209473‑1209765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.