New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	3783584 =	49 (1.010)	5 (0.110)	5/266	5.9	9.6%	coding (78/1020 nt)	gpsA	glycerol‑3‑phosphate dehydrogenase (NAD+)
	?	NC_000913_3_hsa_tpiA	3783606 =	48 (1.050)					coding (56/1020 nt)	gpsA	glycerol‑3‑phosphate dehydrogenase (NAD+)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGCTGCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAA  >  NC_000913_3_hsa_tpiA/3783436‑3783732                                                                                                                                                     |                                                                                                                                                     tggctgCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCAttt                                                                                                                                                      >  1:101209/1‑149 (MQ=255)      gCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGc                                                                                                                                                 >  1:229118/1‑149 (MQ=255)            gcAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCACTTCTTGCCAGGGt                                                                                                                                           <  2:300572/149‑1 (MQ=255)              aGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGGGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTGCTGGCCATTTCTTGCCAGGGTGa                                                                                                                                         >  2:92180/1‑149 (MQ=255)                tGGCGAGTTCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATTGGGGAGAAAGGCGGCGTTACGGTGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATg                                                                                                                                       <  2:168/149‑1 (MQ=255)                     agaTCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAag                                                                                                                                  <  1:59881/149‑1 (MQ=255)                         cGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACGGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCg                                                                                                                              <  1:329803/149‑1 (MQ=255)                            tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCGCGTGGCCATTTCTTGCCAGGGTGCGGGCCAGAGCGGTg                                                                                                                           >  2:276220/1‑149 (MQ=255)                            tttCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGAGATGTTCAGGGTCATGGCACCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTg                                                                                                                           >  1:778375/1‑149 (MQ=255)                            tttCAAGATGGACCGTATCGGGAGAATGCACATCGGGGAGAAACGCGGCGTTACAGCGGGCGCGTGCACGCGTTGCGCTATGTTCAGGGTCATAGCACCAGAGGACAACCCAGTGGCCATTTCTTGCCAGGGTGAAGGCCGGACCGGTg                                                                                                                           >  2:572425/1‑149 (MQ=255)                               cAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGGCg                                                                                                                        >  1:272275/1‑149 (MQ=255)                                aaGATGGAGCGTATCGGGAAAAGGCAAATAGTTCAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGt                                                                                                                       >  2:608607/1‑149 (MQ=255)                                           tATCGGG‑AAAGGCACATCGGGGAGAACCGCGTCGTTACAGCGGGCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAc                                                                                                           <  1:22335/149‑1 (MQ=255)                                             tCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCAcc                                                                                                          >  1:730356/1‑149 (MQ=255)                                                ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                       >  1:521573/1‑149 (MQ=255)                                                ggAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGAt                                                                                                       >  1:435227/1‑149 (MQ=255)                                                    aaGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTGCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATcaca                                                                                                   <  1:51036/149‑1 (MQ=255)                                                            tCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGATGATGGCAAGAGCGGTGCCGTATGAGCCGGCACCGATCACAGTCAGTGa                                                                                           >  1:477307/1‑149 (MQ=255)                                                              ggggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAg                                                                                         <  2:557883/149‑1 (MQ=255)                                                                ggAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCa                                                                                       >  2:559103/1‑149 (MQ=255)                                                                 gagaAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGAGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGACGGCACCGATCACAGTCATTGAAGCAt                                                                                      >  2:176796/1‑149 (MQ=255)                                                                    aaaCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTAc                                                                                   <  1:559103/149‑1 (MQ=255)                                                                      aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                     >  1:681650/1‑145 (MQ=255)                                                                      aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCAtt                                                                                     <  2:681650/145‑1 (MQ=255)                                                                      aCGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGt                                                                                 <  2:435227/149‑1 (MQ=255)                                                                        gcggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTg                                                                               >  1:22212/1‑149 (MQ=255)                                                                          ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                        >  2:417020/1‑122 (MQ=255)                                                                          ggcgTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGa                                                                                                        <  1:417020/122‑1 (MQ=255)                                                                                aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                       <  1:473038/149‑1 (MQ=255)                                                                                aCAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTtcatca                                                                       <  1:472471/149‑1 (MQ=255)                                                                                      gTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATc                                                                 <  2:521573/149‑1 (MQ=255)                                                                                                      gagATATGTTCAGGGTCATGGCCCCAGGGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTa                                                 <  2:136463/147‑1 (MQ=255)                                                                                                           atGTTCAGGGTCATGGCCCCAGATGACAACCTCGTGGCCAGTTCTACCCAGGGTGATGGCAAGCGCGGTGCCGTACGAGCCGGCACCGTTCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTc                                            <  1:247457/149‑1 (MQ=255)                                                                                                              ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                         >  1:146228/1‑149 (MQ=255)                                                                                                              ttCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGcc                                         >  2:541722/1‑149 (MQ=255)                                                                                                               tgggggTCATCGCCCGCGAGGCCAACGTCGTCGGCTTGTCTTGCCAGGGTAATGGCAAGAGCGGGGCCGTACGAGCCGTCACCGAGCACAGTCATTGAAGCAGTACGTTGGTTCAGCAGGCATCCTGATGTTCTTCAGTACCGTGGCCa                                        <  2:154268/146‑1 (MQ=255)                                                                                                                   ggTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCct                                    >  2:580633/1‑149 (MQ=255)                                                                                                                        tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGTGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGACATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                               >  1:626912/1‑149 (MQ=255)                                                                                                                        tGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCctgctgc                               >  1:610032/1‑149 (MQ=255)                                                                                                                          gCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATAAGGCATCCTGATATTCTTCAGTACCTTCGCCAGCctgctgctg                             >  2:267928/1‑149 (MQ=255)                                                                                                                              cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTGGCCAGCCTGCTGCTGCaaa                         <  2:713552/149‑1 (MQ=255)                                                                                                                              cAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTAGCCAGCCTGCTGCTGCaaa                         >  2:221102/1‑149 (MQ=255)                                                                                                                                    aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                             >  1:805734/1‑91 (MQ=255)                                                                                                                                    aCAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGt                                                                             <  2:805734/91‑1 (MQ=255)                                                                                                                                      atcccggTGGGCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCGGTACCGTCCGGCACCGATCACAGTCATTGAAGCACGACGTTGGTTCATCAGGCATCCTGATGTTCTGTAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCAt                 <  2:429220/143‑1 (MQ=255)                                                                                                                                      aaCCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAAttgggcat                 <  2:778375/149‑8 (MQ=255)                                                                                                                                        ccTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAACTAGTTCATGa               >  2:675759/1‑149 (MQ=255)                                                                                                                                             tGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAgc          <  2:101209/149‑1 (MQ=255)                                                                                                                                                  aTTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATc     >  1:378288/1‑149 (MQ=255)                                                                                                                                                     tCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGaa  <  2:22212/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGGCTGCCAGCGCAGTGGCGAGATCGCTTTCAAGATGGAGCGTATCGGGAAAAGGCACATCGGGGAGAAACGCGGCGTTACAGCGGTCGCGTTCAAGCGTTGCGATATGTTCAGGGTCATGGCCCCAGAGGACAACCTCGTGGCCATTTCTTGCCAGGGTGATGGCAAGAGCGGTGCCGTACGAGCCGGCACCGATCACAGTCATTGAAGCATTACGTTGGTTCATCAGGCATCCTGATGTTCTTCAGTACCTTCGCCAGCCTGCTGCTGCAAATAGTTCATGAACAGCGCATCGAA  >  NC_000913_3_hsa_tpiA/3783436‑3783732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.