New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 226729	9 (0.230)	5 (0.130)	5/272	4.6	36.4%	noncoding (971/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
	?	NC_000913_3_hsa_tpiA	2728240 =	NA (NA)					noncoding (945/2904 nt)	rrlG	23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.

TTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACCGCC  >  NC_000913_3_hsa_tpiA/226584‑226753                                                                                                                                                  |                         tttAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGa                         >  1:179044/1‑147 (MQ=32) tttAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGa                         <  2:179044/147‑1 (MQ=32)     ggTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGACAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGa                  <  1:463069/150‑1 (MQ=17)            ccTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAAcc           <  1:582363/150‑1 (MQ=32)              tCGTGAACTCATCGCCGAGGGTAGAGTACTGTTTCGGCAAGGGGGTCATCGCGACTTACTAACCCGATGGAAACAGCGACTACTGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGACGTGAAGAGGCAAACAACGCa         >  1:572966/1‑150 (MQ=11)                gTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGCCACACGGCGGGTCATAACCTCCGTCGTGAACAGCGGAACAACCCaac       >  2:193492/1‑148 (MQ=11)                gTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCACCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGa       >  1:471510/1‑150 (MQ=17)                    aCTCATTTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACCGc   <  1:282947/150‑1 (MQ=14)                     cTCATCTCCGGGGGGAGAGCACTGTGTCGGCAAGGGGGTCATCACGACTTACCAACCCGATGCAAACTGAGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGCGCTAACGTCCGTCGTGAAGGCGGAAACAACCCAGACCGcc  >  1:533628/1‑150 (MQ=11)                                                                                                                                                  |                         TTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACCGCC  >  NC_000913_3_hsa_tpiA/226584‑226753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.