| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 3167879 | 21 (0.530) | 4 (0.110) | 4/262 | 5.0 | 17.9% | coding (368/396 nt) | mqsA | antitoxin for MqsR toxin; transcriptional repressor |
| ? | NC_000913_3_hsa_tpiA | = 3167883 | 17 (0.460) | coding (364/396 nt) | mqsA | antitoxin for MqsR toxin; transcriptional repressor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACTAT > NC_000913_3_hsa_tpiA/3167735‑3168027 | gaAATTATAAGCCCAACAACAATACGCCTGTGGCAGTGGTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATCCAATAGTTCTGGATGCttc > 2:410989/1‑149 (MQ=255) ataAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGCTGACCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGa > 2:390504/1‑150 (MQ=255) taAGCCCAACAACAAGACGCCTGTGGCATTGTTCGCTCAAACCTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGaa < 2:551187/150‑1 (MQ=255) cccAACAACCATACGCCTGGGGAATTGTCCGCTCAAACTTATCGCGAGTGATTTGGCTCACACCCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTCCTGGATGCTTATCCAGAACACg < 2:82759/150‑1 (MQ=255) ccAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTAAATAGTTCTGGATGCTTATCCAGAACACgg > 1:391141/1‑149 (MQ=255) aaTACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTCATATGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGttt < 1:368908/150‑1 (MQ=255) gAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTAGGCATTGCCTTTTTc > 2:651554/1‑150 (MQ=255) gCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGaa > 1:613869/1‑150 (MQ=255) acacTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATc > 1:121577/1‑82 (MQ=255) acacTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATc < 2:121577/82‑1 (MQ=255) acacTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACg > 1:427990/1‑150 (MQ=255) acTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCa > 2:569285/1‑150 (MQ=255) tCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGGAAAGGCAtt > 1:17979/1‑150 (MQ=255) gTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGAAATTCCTTCAATAGTTCTAGCTGCTTATCGAGAACACGTAAAAGTTTGACTATGGAAAGATGAGATTGGACATTGACTTTTTCGTAACGCAGAAACACATTTaaa > 2:538285/1‑148 (MQ=255) aaaaaaGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAGAACGCATTTACACCTccc > 2:537878/1‑150 (MQ=255) cATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTg < 1:390504/150‑1 (MQ=255) ggATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAagagaga < 1:673940/150‑1 (MQ=255) attcaATAGTTCTGGATGCTTATCCAGAACACGTAAAAGGTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCC‑AAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCtttttt < 2:163052/150‑1 (MQ=255) aaTAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGACGGATGGGGTTGGGCATGGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCACCCAAAAATTTCGCTTCCCTCTTTTTGGGTAAGAGAGGGCTTTTTTCGa > 2:170675/1‑150 (MQ=255) ggATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACt > 1:198402/1‑150 (MQ=255) gCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACtat > 2:52479/1‑148 (MQ=255) gCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACtat < 1:52479/148‑1 (MQ=255) | GAAATTATAAGCCCAACAACAATACGCCTGTGGCATTGTTCGCTCAAACTTATCGCGAGTGATTTGGCTCACACTCCGGTAAAGAAAAAAGCGAGTTGCCCCCGCTTTTCCATTAATTAACGGATTTCATTCAATAGTTCTGGATGCTTATCCAGAACACGTAAAAGTTTGATTGTGGAAGGATGAGGTTGGGCATTGCCTTTTTCGTAACGCGAAAACGCATTTACACCTCCCCCAAAAATTTCGCTTGCCTCTTTTTGGGTAAGAGAGAGCTTTTTTCGAACCTTCACTAT > NC_000913_3_hsa_tpiA/3167735‑3168027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |