| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 3363806 = | 29 (1.180) | 4 (0.170) | 4/272 | 2.8 | 13.0% | coding (1000/2382 nt) | yhcD | putative outer membrane fimbrial subunit usher protein |
| ? | NC_000913_3_hsa_tpiA | 3363821 = | 26 (1.110) | coding (1015/2382 nt) | yhcD | putative outer membrane fimbrial subunit usher protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCC > NC_000913_3_hsa_tpiA/3363659‑3363950 | gggaaccagactcgaccggattgatgccgcctgataattttctgctacgataacgccgccgttcattgcactccagcgtgtcagattccatccgctcgatgcactaattacccaaggtgattcttaatagtaatggtctacccacccTa < 2:398820‑M1/2‑1 (MQ=255) cTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTAt > 1:217915/1‑149 (MQ=255) ggCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGGAAGCTTCCAGGGTTATc < 2:260297/148‑1 (MQ=255) gaaccagactcgaccggattgatgccgcctgataattttctgctacgataacgccgccgttcattgcactccagcgtgtcagattccatccgctcgatgcactaattacccaaggtgattcgtcatagtcatcgtctacccgcccTATc > 2:114604‑M1/146‑149 (MQ=255) cagactcgaccggattgatgccgcctgataattttctgctacgatacagaggccgttcattgcactccagcgtgtcagattccatccgctcgatgcactaattacccaaggtgattcgtcatagtcatcgtctacccgcccTATCGctc < 2:180508‑M1/8‑2 (MQ=255) gcATTCACTATCCCTGATGTACCTGTTCGCAATTGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCACTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTcgc < 2:72580/149‑1 (MQ=255) tATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGc < 2:217915/149‑1 (MQ=255) gattggtgccgcggtatggttttttggtacgataacgccgccgtttgttgcactccagcgtgtcagattccatccgctcgatgcacttattacgcaaggtgattcgtcatagtcatcgtctacccgcctTATCGCTTCGCGATAGGGCg > 2:170470‑M1/130‑149 (MQ=255) tCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCgg < 2:223721/149‑1 (MQ=255) gcccTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCgg < 2:223740/148‑1 (MQ=255) cTGTTGAACCTGTTCGCAATGGTAAGAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGCTCGCACAACTATATTGCTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTa < 1:388587/149‑1 (MQ=255) gCAATGGTAATAGTGATTTCAAGTCCACCGTGGTAGAACCAGACGCAAGTTCGCACCACTATATTGTTCCCTCCACACTGTTTAATCAGTATGTAGAAAGATTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGAc < 2:6148/149‑1 (MQ=255) aTGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGaa < 2:254751/149‑1 (MQ=255) tGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTgg > 2:247516/1‑148 (MQ=255) tGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTgg > 2:247636/1‑148 (MQ=255) tGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTgg < 1:247636/148‑1 (MQ=255) tGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTgg < 1:247516/148‑1 (MQ=255) aTCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTa > 1:140152/1‑149 (MQ=255) tCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGTTAGGGCGGGTAGACGATGACTATGACGAATAACCTTGGGTaa > 1:398820/1‑149 (MQ=255) gTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCgg < 2:301661/108‑1 (MQ=255) gTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCgg > 1:301661/1‑108 (MQ=255) ttGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGc < 1:344932/149‑1 (MQ=255) aaCAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAACGCTTCCAGGGTTCTCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCCCCTTGGGTAGTTAGTGCACGGAGCGGATggc > 2:204/1‑148 (MQ=255) ggTAGTTCACACAACTAGATTCCTTCCTCCAACCTGTTTAAGCAGCATAGAGAAAGCTTCCACGGTTATCGCTTCGCGATAGGGGGGGTAGACGATGACTATGACGAATCGGCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGac < 2:99182/149‑1 (MQ=255) cTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGGGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCaa < 2:92936/149‑1 (MQ=255) cgatgcactaattacccaaggtgattcgtcatagtcatcgtctacccgcccTATCGCTTCGCGATAGGGCGGGTAGa > 2:22956‑M1/52‑77 (MQ=255) cgatgcactaattacccaaggtgattcgtcatagtcatcgtctacccgcccTATCGCTTCGCGATAGGGCGGGTAGa < 1:22956‑M1/26‑1 (MQ=255) ttCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAAcggc > 1:63060/1‑149 (MQ=255) cTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGgcggcg > 1:61370/1‑149 (MQ=255) gTTTAATCAGCATGTAGAAAGCTTCCAGGGTTCTCGCTTCGCGATAGGCCGGGTAGACGATGACTATGACGACTCACCTTGGGGAATTAGTGCATCCGGCGGCTGGAATCGGACACGCTGGAGTGCAAGGAACCGGCGCGTTATCGTAg > 1:112887/1‑149 (MQ=255) tttAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGc < 2:119074/149‑1 (MQ=255) ttAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCa > 2:350550/1‑149 (MQ=255) aTCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCGTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGGAATGAACGGCGGCGTTATCGTAGCAgca > 2:233468/1‑147 (MQ=255) aaaGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAggcg > 2:351191/1‑149 (MQ=255) gggTTATCGCTGCGCGCTAGGGCGGGTAGACGATGACTATGACGAATCAACTTTGGTAATTAGTGCATCGGGCGGATGGAATCTTACACGCTGGCGTACAATTAACCGCGGCGGTAACGTAGCTGAACATTATCAGCCGGCATCACTcc > 2:138323/1‑149 (MQ=255) | CCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCC > NC_000913_3_hsa_tpiA/3363659‑3363950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |