New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 434735718 (0.730)3 (0.130) 3/266 3.2 14.0% intergenic (‑49/+29) fumB/dcuB anaerobic class I fumarate hydratase (fumarase B)/C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor
?NC_000913_3_hsa_tpiA = 4347367 20 (0.870)intergenic (‑59/+19) fumB/dcuB anaerobic class I fumarate hydratase (fumarase B)/C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAATCGGAAGTGAGTAGATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGG  >  NC_000913_3_hsa_tpiA/4347226‑4347501
                                                                                                                                   |                                                                                                                                                
tAATCGGAAGTGGTTTGGTAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCAc                                                                                                                                 <  2:283200/149‑1 (MQ=255)
           gAGTAGATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCCCGCAACGTGCAt                                                                                                                      >  2:320501/1‑149 (MQ=255)
                 aTAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATaa                                                                                                                <  1:364949/149‑1 (MQ=255)
                 aTAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATaa                                                                                                                <  2:149649/149‑1 (MQ=255)
                 aTAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGATTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGGGTGGTCACGGGCGGCACGCAAAGTGCAGTtatag                                                                                                                >  1:156608/1‑148 (MQ=255)
                   aGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTCGTTATTTGTATTTGTCAGGCCGCGTAGTCACGGTCTGCGCGCAAAGTGCGTTTATAAGa                                                                                                              >  1:314173/1‑149 (MQ=255)
                       ttCGGTATTGTCTTTCCCCATCGGGAAAGGGGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGGGCATTTATAAGAAccc                                                                                                          >  1:408543/1‑149 (MQ=255)
                       tgccgTATTTTCTTTCCCCAGCGGGAAAGGTCCCTGGTAGATAAAGGTTTTTTTTGACATACCTTCCAGCCTTTAACTCTTTATTTGTTATTCGAAAATGGCGTACCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAAccc                                                                                                          <  1:245990/145‑1 (MQ=255)
                                      ccccATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCATGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGaa                                                                                           <  1:288792/149‑1 (MQ=255)
                                                       ccTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCgcgg                                                                                               <  1:149381/128‑1 (MQ=255)
                                                       ccTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCgcgg                                                                                               >  2:149381/1‑128 (MQ=255)
                                                                           tttgACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGGAAATGGCGTGCCGCGTAGTAACGGGCGGCACGTATAGTGTAGTTATAAGACGGCGTAGACCGGGGGGAAGGACACGCCGAATACGAAAGATACGCTCGCCCCGATc                                                      >  2:285489/1‑149 (MQ=255)
                                                                                   aGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCgg                                              >  1:5178/1‑149 (MQ=255)
                                                                                                 aaCTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAGCCCGTACATCGCGGCGAAGATCCAGCCGGAGACGCACGCTACGCCCACCACACTCCCCCCCGTGAGAGTGAAGCtgt                                >  1:174461/1‑149 (MQ=255)
                                                                                                        tATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTAGAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTtgat                         <  2:314173/149‑1 (MQ=255)
                                                                                                             gTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGa                    >  1:150609/1‑149 (MQ=255)
                                                                                                              ttATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGaa                   >  1:81071/1‑149 (MQ=255)
                                                                                                                               gCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATgtgggtgg  <  2:221480/149‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                                
TAATCGGAAGTGAGTAGATAGTATTCGGTATTGTCTTTCCCCATCGGGAAAGGTGCCTGGTAGATAAAGGGTTTGTTTGACATAGCTTCCAGCCTGTAACTCTGTATTTGTTATTCGAAAATGGCGTGCCGCGTAGTCACGGGCGGCACGCAAAGTGCATTTATAAGAACCCGTACATCGCGGCGAAGATCCAGCCGAAGACGCACGATACGCTCACACCAATCAACCCCGGCAGAATAAAGCTGTGGTTGATGACGAAGCGACCGATGTGGGTGG  >  NC_000913_3_hsa_tpiA/4347226‑4347501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.