| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 671558 | 36 (1.040) | 5 (0.160) | 5/262 | 3.8 | 13.0% | coding (48/1032 nt) | holA | DNA polymerase III, delta subunit |
| ? | NC_000913_3_hsa_tpiA | = 671568 | 34 (1.070) | coding (38/1032 nt) | holA | DNA polymerase III, delta subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGATCGCATTCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGTTGTGGTCGACGTCTGTTCTTCGTCGGAACGAAT > NC_000913_3_hsa_tpiA/671411‑671688 | aaaGATCGCATTCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGcc < 1:368553/149‑1 (MQ=255) gATCGCATTCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATAAGCCGCGCGCAGCCCtt > 2:147120/1‑149 (MQ=255) tCGCATTCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCa < 1:344529/149‑1 (MQ=255) ttCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAg < 2:397684/149‑1 (MQ=255) gtgtTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTc > 2:294507/1‑134 (MQ=255) gtgtTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTc < 1:294507/134‑1 (MQ=255) gggATCAATGGAAAAAGTGTGTTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACACTGTATTGTTACCAAGTAGAATATACGCCGCGCGCAGCCTTTCATTGAGCTGCGCGCGGAgtt < 1:448034/149‑1 (MQ=255) gATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAgttgt > 1:527999/1‑149 (MQ=255) caTCAACGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCCGCTAACAGACTAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAgttgt < 1:115097/148‑1 (MQ=255) aaTGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGa > 2:307949/1‑128 (MQ=255) aaTGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGa < 1:307949/128‑1 (MQ=255) aaGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTCACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGCGCTGCGCGCGGAGTTGTTCCGGGTACAAc < 2:497787/149‑1 (MQ=255) aTCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCa < 1:44786/149‑1 (MQ=255) ggacgtaGCTACCAGACGAACATGCG‑CCTGGCTTTCCTGCAATCACCGACGATCGTCACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGTGCGGAGTTGTGCCGGGTATATTCGAATCACCAGGTACCCTGCgtggt < 2:265715/143‑1 (MQ=255) ccGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGtggtgg > 2:415579/1‑149 (MQ=255) ccGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGtggtgg < 1:29137/149‑1 (MQ=255) cAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCTATAACATAGGATCGTTACCAAGTATAAGATACGCCGCGCGCAGCCCTTCATTGAGCTACGCGCGGAGTTGTTCCGGGTTCAACCGAATCATCAGCTACCCAGCGTGGTGgaga < 2:479246/149‑1 (MQ=255) cTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGAcgc < 2:527999/149‑1 (MQ=255) aCCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGtggtgg < 1:446008/141‑1 (MQ=255) aCCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGtggtgg > 2:446008/1‑141 (MQ=255) tGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAAtcatca > 1:577775/1‑121 (MQ=255) tGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAAtcatca < 2:577775/121‑1 (MQ=255) gatgcaca‑cCGGCCTGGCTTGCCTGCAATAACAGCGGCTCGTTATCTAGTAAAATATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAg < 1:73431/144‑1 (MQ=255) cTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGCAGt > 2:218130/1‑149 (MQ=255) ggCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTAt < 1:154696/149‑1 (MQ=255) ggCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTAt < 1:560742/149‑1 (MQ=255) tGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCgtggt < 1:533841/112‑1 (MQ=255) tGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCgtggt > 2:533841/1‑112 (MQ=255) aaTAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTGATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGTTGTGTTc > 2:559880/1‑149 (MQ=255) aaTAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTCCCCAGCGAGGTGGAGACGCGTGCAGGCGTTGCCGGAGTACTCGTTCTgggc > 2:500467/1‑147 (MQ=255) aaCAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCgtggtg < 2:347489/107‑1 (MQ=255) aaCAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCgtggtg > 1:347489/1‑107 (MQ=255) ggtACCAAGTAAAAGATACGCCGGGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTCCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGTTGTGGTCGACGTCTGttcttc < 1:60718/147‑1 (MQ=255) ccAAGTAAAAGATACGCCTCGCGCAGCCCTTCATTGAGCCGCGCGCGTAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGTCGTTGCCGGAGTATCCGGTGTGGTCGACGTCTGTTCTtcgtcg < 1:461204/149‑1 (MQ=255) ccAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTCCCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGCTGTGGTCGACGTCTGTTCTtcgtcg < 1:460599/149‑1 (MQ=255) aaGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGTTGTGGTCGACGTCTGTTCTTCGTGGGAACGAat > 1:38595/1‑149 (MQ=255) | AAAGATCGCATTCCAGTCAGTGTTGGGATCAATGGAAAAAGTGTGGTGTTCTTCGAATCCTTGTGCCGCAGCTACCTGACGAACA‑GCGTCCTGGCTTTCCTGCAATAACAGAGGATCGTTACCAAGTAAAAGATACGCCGCGCGCAGCCCTTCATTGAGCTGCGCGCGGAGTTGTTCCGGGTACAACCGAATCATCAGTTACCCAGCGTGGTGGAGACGCGTGCAGGCGTTGCCGGAGTATCCGTTGTGGTCGACGTCTGTTCTTCGTCGGAACGAAT > NC_000913_3_hsa_tpiA/671411‑671688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |