New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 4245080 =NA (NA)6 (0.150) 6/266 4.6 NA noncoding (7/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913_3_hsa_tpiA 4245106 = NA (NA)noncoding (33/126 nt) REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.

AAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGC  >  NC_000913_3_hsa_tpiA/4244961‑4245246
                                                                                                                                                 |                                                                                                                                            
aaaCAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGacaa                                                                                                                                           >  1:67156/1‑149 (MQ=255)
 aacagcAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGacaac                                                                                                                                          >  1:32596/1‑149 (MQ=255)
    aacaaGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCTTCATTCCAGGACGGTTAAGCCTTTCACGCCTTATCCGCCaacaac                                                                                                                                       >  2:586717/1‑149 (MQ=255)
    aacaaGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACaacaac                                                                                                                                       >  1:37164/1‑149 (MQ=255)
       acggTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGc                                                                                                                                    <  2:749244/147‑1 (MQ=255)
         ggTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCt                                                                                                                                  >  2:547098/1‑149 (MQ=255)
            aaCCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGGTAAGGCTTTCACGCCTTATCCGACCACACCTGCCTGac                                                                                                                               >  1:45048/1‑148 (MQ=255)
               ccaccaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATAACATCCATGGGGTTCTTCCTCATTCCAGAACGGATAAGGCTTTCACGCCTTATCCGACCACAACTGCCTGATGCg                                                                                                                            >  2:474981/1‑149 (MQ=255)
               ccaccaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGATTTTCCTCCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCg                                                                                                                            >  1:402897/1‑149 (MQ=255)
                caccaGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCCCCCCTTATCCGACAACAACTGCCTGATGCGa                                                                                                                           >  1:396083/1‑149 (MQ=255)
                      cagGCCGAGCAGAACGAGCACTGACCATTTCATCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGa                                                                                                                     <  2:338569/149‑1 (MQ=255)
                           cGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTAACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGt                                                                                                                >  2:383256/1‑149 (MQ=255)
                              gCAGACCTAGCCCTGACCATTTCAGGGCGTCGCTTTGCCACCAAGGTTTTTTTTGAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCtt                                                                                                             <  1:586717/149‑1 (MQ=39)
                                  aCCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCa                                                                                                         >  2:134328/1‑149 (MQ=255)
                                     tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTCTCCGACACCAACTTCCTGATGCGACGCTGACGCCTCTCATccgtc                                                                                                      >  2:144991/1‑145 (MQ=255)
                                     tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGTCAACAACTGCCTGATGCGACGCTGACGCGTCTTTTCAGGc                                                                                                      >  2:506111/1‑149 (MQ=255)
                                     tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGc                                                                                                      <  2:1974/149‑1 (MQ=255)
                                     tAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCGCATTCCAGGACGGATAAGTCTTTCACGCCGTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCGTATCAGGc                                                                                                      >  2:252617/1‑149 (MQ=255)
                                           tGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAt                                                                                                >  2:669874/1‑149 (MQ=255)
                                           tGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAt                                                                                                >  2:704770/1‑149 (MQ=255)
                                           tGACCACTTCAGCGCGTCGCTTGGCCACGAATGTTTCGTTTTAATGACATCCATGGGGTTCTTCCTTATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAt                                                                                                <  1:208685/149‑1 (MQ=38)
                                                aTTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTACGtt                                                                                           >  2:726782/1‑149 (MQ=255)
                                                    cAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCgg                                                                                       >  1:528961/1‑149 (MQ=255)
                                                          gTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGt                                                                                 <  1:210865/149‑1 (MQ=255)
                                                          gTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGt                                                                                 >  2:210865/1‑149 (MQ=255)
                                                                ttGTCACCAATGTTTCTTTTTAAGGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCg                                                                           <  1:199101/149‑1 (MQ=255)
                                                                  gCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGa                                                                         <  2:135775/149‑1 (MQ=255)
                                                                   ccaccaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGAc                                                                        <  1:509094/149‑1 (MQ=255)
                                                                     accaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGttt                                                                                    >  2:427433/1‑135 (MQ=255)
                                                                     accaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGttt                                                                                    <  1:427433/135‑1 (MQ=255)
                                                                     accaATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACaa                                                                      >  1:386898/1‑149 (MQ=255)
                                                                      ccaATCTTTCTTTTTCATGACATCCATGGGCTCCACCCTAAACCCAAGACGAATAAGGCTTTCACGCCTTATCCGACAACAACCAACTCCCTCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                     <  1:441964/149‑1 (MQ=255)
                                                                            tttCGTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTc                                                               <  2:300877/149‑1 (MQ=255)
                                                                                   ttAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCATGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgccgc                                                        <  2:583957/149‑1 (MQ=255)
                                                                                     aaTGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAt                                                      >  1:61691/1‑149 (MQ=255)
                                                                                           aTCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCa                                                <  1:669874/149‑1 (MQ=255)
                                                                                                 ggggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                >  1:53147/1‑127 (MQ=255)
                                                                                                 ggggTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                <  2:53147/127‑1 (MQ=255)
                                                                                                  ggcttctccCCCATTCCAGGACGACTAAGGCTCTCACCCCTTATCCGACAACAACCGCCTCATGCCACGCTGACCCGTCTTATCATGCCTACATACGTTTCGGTATTCTAAGCCCGACAAGGCGTTCACGCCGCATCCGGCATTCcaca                                         <  2:173545/146‑1 (MQ=255)
                                                                                                   ggTTCTTCCTCATCCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGGTCACGCCGCATCCGGCATTTCACAg                                        <  1:570539/149‑1 (MQ=255)
                                                                                                         tcCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTAc                                  >  1:525475/1‑149 (MQ=255)
                                                                                                           cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATc                                                                                                          >  1:3139/1‑75 (MQ=255)
                                                                                                           cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATc                                                                                                          <  2:3139/75‑1 (MQ=255)
                                                                                                            tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                               >  1:59852/1‑149 (MQ=255)
                                                                                                            tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCAACAACAACTGCCTGATGGGTCGCTGTCGCGTCTTATCAGGCCTACATCCGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                               <  2:81886/149‑1 (MQ=38)
                                                                                                             cactCCAGGACGGACAAGGCTTTCACGCCTTATCCGACAACAACTGCCGTATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTgg                              <  2:402897/146‑1 (MQ=255)
                                                                                                             cATTCCAGGACGGATAAGGCTTCCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTgg                              <  1:205205/149‑1 (MQ=255)
                                                                                                               ttCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGGTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTg                            >  1:535932/1‑149 (MQ=255)
                                                                                                                tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                           <  2:61691/149‑1 (MQ=255)
                                                                                                                tCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                           <  1:39016/149‑1 (MQ=255)
                                                                                                                  cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                         <  1:547098/149‑1 (MQ=255)
                                                                                                                  cAGGACGGATAAGGCCTCCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                         <  2:590004/149‑1 (MQ=255)
                                                                                                                   aGGACGGCTAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCAAAGCATTACTTGGTGATAc                        >  2:750489/1‑149 (MQ=255)
                                                                                                                    ggACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                     <  1:392671/103‑1 (MQ=255)
                                                                                                                    ggACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                     >  2:392671/1‑103 (MQ=255)
                                                                                                                    ggACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGCAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACg                       >  1:282968/1‑149 (MQ=255)
                                                                                                                     gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGa                      <  2:37164/149‑1 (MQ=255)
                                                                                                                     gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGa                      >  1:438725/1‑149 (MQ=255)
                                                                                                                         gATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCt                  <  1:134328/149‑1 (MQ=255)
                                                                                                                         gATAAGGCGTGAAAGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAGATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCGTTTCACGGCGTTACTTGGTGAGACGAGTCt                  >  1:221741/1‑149 (MQ=37)
                                                                                                                          aTAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTg                 >  2:268467/1‑149 (MQ=255)
                                                                                                                          aTAAGGCTTTCACGCATTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCATACATCCGTTTCGGGTTTATAGGCCGGCCAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGCGATACGaagcgc                 >  2:171164/1‑144 (MQ=37)
                                                                                                                            aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTgcg               >  2:449898/1‑149 (MQ=255)
                                                                                                                                       gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg    >  2:413455/1‑149 (MQ=255)
                                                                                                                                         cTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGc  >  2:451468/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                            
AAACAACAAGGTAACCCACCAGCAGGCCGAGCAGACCTAGCACTGACCATTTCAGCGCGTCGCTTTGCCACCAATGTTTCTTTTTAATGACATCCATGGGGTTCTTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGC  >  NC_000913_3_hsa_tpiA/4244961‑4245246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.