New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 2316849	67 (1.240)	5 (0.100)	5/254	6.7	7.7%	noncoding (16/197 nt)	RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site	RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site
	?	NC_000913_3_hsa_tpiA	= 2316857	59 (1.190)					noncoding (24/197 nt)	RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site	RIP162 (repetitive extragenic palindromic) element; contains 5 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACT  >  NC_000913_3_hsa_tpiA/2316711‑2316992                                                                                                                                           |                                                                                                                                                agcaaaaCAATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgtgt                                                                                                                                       <  2:722421/146‑1 (MQ=255)  ttAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTACGGCCGGCAGATAAAGCCTAATCACCTGTCGGCCAGATAAGACGCGTTAGTGTc                                                                                                                                      >  1:752923/1‑149 (MQ=255)   tAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCt                                                                                                                                     <  2:197299/149‑1 (MQ=255)       aCCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCCGATAAGACGCGTTAGTGTCTTATc                                                                                                                                 >  1:311848/1‑149 (MQ=255)        ccATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgtg                                                                                                                                        <  2:366293/141‑1 (MQ=255)        ccATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgtg                                                                                                                                        >  1:366293/1‑141 (MQ=255)        ccATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCt                                                                                                                                >  1:648699/1‑149 (MQ=255)         cATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTg                                                                                                                               <  1:863559/149‑1 (MQ=255)          aTCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCCCCCGTAGGCCCGATAAGACGCGTTAGTGTCCTATCTgg                                                                                                                              >  2:94872/1‑149 (MQ=255)           tCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAACACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGc                                                                                                                             <  2:494222/149‑1 (MQ=255)              gTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGTCAtt                                                                                                                          >  1:802057/1‑149 (MQ=255)              gTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGCCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCCTTAGGTTCTTATCTGGCAtt                                                                                                                          >  2:143787/1‑149 (MQ=255)              gTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACATTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCAtt                                                                                                                          <  1:169779/149‑1 (MQ=255)                 gCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGc                                                                                                                       >  2:460291/1‑149 (MQ=255)                  ccggaagaaATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAACACGCGTTAGTGTCTTATCTGGCATTTGCa                                                                                                                      >  2:447258/4‑149 (MQ=255)                   cAGACGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCAc                                                                                                                     <  1:217030/149‑1 (MQ=255)                   cAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCAc                                                                                                                     <  1:646360/149‑1 (MQ=255)                      aagaaATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACTTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGa                                                                                                                  <  1:812808/149‑1 (MQ=255)                       agaaATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGAt                                                                                                                 <  2:425127/149‑1 (MQ=255)                         aaaaCTGCGATGATGAAGCTGGGTGTCAAGAACGATATCGCCCTGATGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTg                                                                                                               <  2:324000/149‑1 (MQ=255)                              tGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGa                                                                                                          >  1:801870/1‑149 (MQ=255)                                cGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGTTTGCCGGTTg                                                                                                        >  2:706669/1‑149 (MQ=255)                                 gatgatGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGAtaa                                                                                                       >  2:294327/1‑147 (MQ=255)                                       gaAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACATTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGCTGCGGCGTa                                                                                                 >  2:958251/1‑149 (MQ=255)                                         aGCTGGGTGTCGAGAACGACATCGCCCTGCTGAATTATCTCTCCTCAATGACCTTAAGTCCGGCAGATAAATACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTaaa                                                                                               <  1:299219/149‑1 (MQ=255)                                          gCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAAc                                                                                              <  2:578458/149‑1 (MQ=255)                                            tGGGTGTCGATCACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACCAATCAGCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGc                                                                                            <  1:617473/149‑1 (MQ=255)                                             gggTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGcc                                                                                           <  2:801870/149‑1 (MQ=255)                                                   cGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGCCGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGCATGCGGCGGAAACGCCTTATcc                                                                                     >  2:226809/1‑149 (MQ=255)                                                    gagaACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCg                                                                                    >  1:806745/1‑149 (MQ=255)                                                    gagaACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGACAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTACACCGATTGCCGAATGCGGCGTAAACGCCTTATCCg                                                                                    >  2:75438/1‑149 (MQ=255)                                                     agaACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGAACCTATTGCAGGATGGGGCGTAAACGCCTTATCCgg                                                                                   >  1:749137/1‑149 (MQ=255)                                                       aaCGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTgg                                                                                                                              <  2:491630/104‑1 (MQ=255)                                                       aaCGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTgg                                                                                                                              >  1:491630/1‑104 (MQ=255)                                                          gATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgt                                                                                                                                         <  1:184094/90‑1 (MQ=255)                                                          gATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAgt                                                                                                                                         >  2:184094/1‑90 (MQ=255)                                                          gATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCCCCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                                                                              >  1:739647/1‑149 (MQ=255)                                                                  ccTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCa                                                                      >  1:641718/1‑149 (MQ=255)                                                                         aaTTATCTCTCTTCAATGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTc                                                               >  1:393444/1‑149 (MQ=255)                                                                              tctctcTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCTGCCTACGATTCCCCTTATTTgcacaa                                                          >  1:281/1‑149 (MQ=255)                                                                                  tctTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGcc                                                                                           <  2:387634/112‑1 (MQ=255)                                                                                  tctTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGcc                                                                                           >  1:387634/1‑112 (MQ=255)                                                                                  tctTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTa                                                      >  1:241978/1‑149 (MQ=255)                                                                                       aGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTa                                                                                                                                           <  2:91633/59‑1 (MQ=255)                                                                                       aGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTa                                                                                                                                           >  1:91633/1‑59 (MQ=255)                                                                                       aGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTa                                                 >  1:582326/1‑149 (MQ=255)                                                                                        gTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGAAACGCCCACGTCAGAGCTGGCCTCCGCAACTATGGCCGGATGCGGCGTAACCGCTTTATTCTGCCCACGATTACCATTATTTCAACAAATTACATTaa                                                >  1:946460/1‑149 (MQ=255)                                                                                             cTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAg                                           >  1:895945/1‑149 (MQ=255)                                                                                                    ccGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCTTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGAt                                    <  1:619287/149‑1 (MQ=255)                                                                                                        cAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGAGTAAACGCCTTATCCGGCCGACGATTCCCATTAATCCAACACAAAACATTAAAATAGGCCAGACAAGa                                >  1:677528/1‑149 (MQ=25)                                                                                                         aGATAAAGACTAATCACCTGTAGGCCAAAATACAACCGCTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGAc                               >  2:928142/1‑149 (MQ=38)                                                                                                           aTAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGAcgc                             >  2:665597/1‑149 (MQ=255)                                                                                                             aaaGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATGCGAcgctg                           >  1:387929/1‑147 (MQ=255)                                                                                                             aaaGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGt                           >  1:859841/1‑149 (MQ=255)                                                                                                                  cTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATgcggc                                                                                                    >  2:556505/1‑71 (MQ=255)                                                                                                                  cTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATgcggc                                                                                                    <  1:556505/71‑1 (MQ=255)                                                                                                                    aaTCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTc                    <  1:312641/149‑1 (MQ=255)                                                                                                                      tCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTcagc                                                            >  1:453077/1‑105 (MQ=255)                                                                                                                      tCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTcaac                                                            <  2:453077/107‑1 (MQ=255)                                                                                                                           tGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTg             >  2:354842/1‑149 (MQ=255)                                                                                                                            gTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCCTCTgg            >  2:552087/1‑149 (MQ=255)                                                                                                                             tAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTggt           >  1:575347/1‑148 (MQ=255)                                                                                                                                  cAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTg      >  1:99818/1‑149 (MQ=255)                                                                                                                                  cAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCCTCGCATCTGGCTTTTg      >  2:183259/1‑149 (MQ=255)                                                                                                                                    gATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCa    >  1:60200/1‑149 (MQ=255)                                                                                                                                    gATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCa    <  1:354842/149‑1 (MQ=255)                                                                                                                                      tAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATACGACGCGTAAGCGTCGCATCTGGCATTTGCCCt  >  2:718063/1‑149 (MQ=255)                                                                                                                                           |                                                                                                                                                ATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAATCACCTGTAGGCCAGATAAGACGCGTTAGTGTCTTATCTGGCATTTGCACCGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACT  >  NC_000913_3_hsa_tpiA/2316711‑2316992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.