Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 4,187,628 G→C G766A (GGT→GCT)  rpoC → RNA polymerase, beta prime subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA4,187,6280GC98.8% 269.0 / ‑5.9 81G766A (GGT→GCT) rpoCRNA polymerase, beta prime subunit
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (40/39);  minor base T (1/0);  total (42/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

CTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGA  >  NC_000913_3_hsa_tpiA/4187485‑4187769
                                                                                                                                               |                                                                                                                                              
cTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGa                                                                                                                                           >  2:909355/1‑149 (MQ=255)
 ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGaa                                                                                                                                          <  1:865846/149‑1 (MQ=255)
 ttCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGaa                                                                                                                                          >  2:865846/1‑149 (MQ=255)
           tCTACATGGTGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAg                                                                                                                               <  2:433614/149‑1 (MQ=255)
              aCATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATTGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTAc                                                                                                                            <  1:563244/149‑1 (MQ=255)
                    tgGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCAtc                                                                                                                      <  2:925010/149‑1 (MQ=255)
                      gCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGTCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGGAGCTCTGAACGT‑ACTCCGGTAATTGAtctc                                                                                                                    >  1:88937/1‑149 (MQ=255)
                        cGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTcca                                                                                                                  >  2:665203/1‑149 (MQ=255)
                         gACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTccac                                                                                                                 >  1:820798/1‑149 (MQ=255)
                         gACTCCGGTGCGCGTGGTTCTGCGCCACAGATTCGTCCGCTTGCTGGTATGCCTGGTCTGATGGCGAAGCTGGATGGCTCCATCATCGAAACGTCAATCACCGCGAACTTCCGTGAAGCTCTGAATGT‑ACCCCAGTACTTCCTCTccac                                                                                                                 <  1:887767/149‑1 (MQ=255)
                                   cgcgTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGCCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCCCGACCTTCCGTGACGCTCTGAACGT‑ACTCCACTACTTCATCTCCCCCCACGGtcgc                                                                                                       >  2:25643/1‑146 (MQ=255)
                                    gcgTGGTTCTGCGGCACGGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCCCGGTGCTc                                                                                                      >  1:197386/1‑149 (MQ=255)
                                      gTGGTTCTGCGGCACCGATACGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGt                                                                                                    <  1:385884/149‑1 (MQ=255)
                                      gTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGt                                                                                                    >  1:458980/1‑149 (MQ=255)
                                      gTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAACCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAAATCACAGGTATGTC‑GTACGTAACCCAAGTACGGCATCTCCACCCACGGTGCTCGt                                                                                                    >  1:221769/1‑149 (MQ=255)
                                        ggTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCGGTACTTCATCTCCACCCACGGTGCTCGTaa                                                                                                  >  2:338908/1‑149 (MQ=255)
                                            cTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCATGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAgct                                                                                              >  2:353620/1‑147 (MQ=255)
                                                  cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTcc                                                                                                                                 <  2:422847/108‑1 (MQ=255)
                                                  cacaGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTcc                                                                                                                                 >  1:422847/1‑108 (MQ=255)
                                                     aGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCCTCTACAGGTAAGGTCCCCGGAAATCTCTGGCGGAt                                                                                     >  1:263299/1‑149 (MQ=255)
                                                       aTTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTAAGTCATCTGCCTTACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATAc                                                                                   >  1:708283/1‑149 (MQ=255)
                                                        ttCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATAcc                                                                                  <  1:926144/149‑1 (MQ=255)
                                                         tCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCg                                                                                 <  1:93889/149‑1 (MQ=255)
                                                                 ttGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaa                                                                         >  2:348789/1‑149 (MQ=255)
                                                                  tGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGaaaa                                                                        <  1:348789/149‑1 (MQ=255)
                                                                   gCTGGTATGCGTGGTCGGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCCCCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTACAGGTCTGGCGGATACCGCACTGAAAAc                                                                       <  1:910794/149‑1 (MQ=255)
                                                                    cTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACt                                                                      <  2:446402/149‑1 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCa                                                                                                                        >  1:490113/1‑93 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCa                                                                                                                        <  2:490113/93‑1 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc                                                                >  2:158065/1‑149 (MQ=255)
                                                                          tGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCCAACTTGCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACCGAAAACTGCGAAc                                                                >  2:160639/1‑149 (MQ=255)
                                                                            cGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTc                                                              <  1:681784/149‑1 (MQ=255)
                                                                               ggTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg                                                           <  2:192755/149‑1 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt                                                          >  2:839013/1‑149 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGt                                                          >  1:873250/1‑149 (MQ=255)
                                                                                gTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCCGt                                                          >  1:789775/1‑149 (MQ=255)
                                                                                 tCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGtt                                                         >  1:552091/1‑149 (MQ=255)
                                                                                   tGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTAAc                                                       >  1:143171/1‑149 (MQ=255)
                                                                                    gATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAcc                                                      <  1:168171/149‑1 (MQ=255)
                                                                                        gCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGAc                                                  <  2:873250/149‑1 (MQ=255)
                                                                                        gCGAAGCCGGATGGCTCCATCATCAAAACGCCAATCACCGCGAACTTCCGTGAAGCTGTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTCATCGTAAAGGTCTGGCGGATACCGCAGTGAAAACTGCGAACTCCGGTTACCTGAc                                                  <  2:695858/149‑1 (MQ=255)
                                                                                          gAAGCCGGATTGCTCCATCATCAGAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACTT‑ACTCCAGTACTTCATCTCCACCCATGGTGCTAGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc                                                <  1:811808/149‑1 (MQ=255)
                                                                                          gAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGTTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACtc                                                <  2:876536/149‑1 (MQ=255)
                                                                                                ggACGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCgtcgtc                                          <  2:946231/149‑1 (MQ=255)
                                                                                                 gATTGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCt                                         <  2:630449/149‑1 (MQ=255)
                                                                                                 gATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATCCCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGCCGCCt                                         >  2:151979/1‑149 (MQ=255)
                                                                                                       tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGa                                   >  1:756762/1‑149 (MQ=255)
                                                                                                       tCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGa                                   >  2:75920/1‑149 (MQ=255)
                                                                                                        ccATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGAc                                  <  1:839013/149‑1 (MQ=255)
                                                                                                         catcatCGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACg                                 >  1:340621/1‑149 (MQ=255)
                                                                                                           tcatcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTg                               <  1:388591/149‑1 (MQ=255)
                                                                                                            tttcGAACCGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              <  1:793192/147‑1 (MQ=255)
                                                                                                             atcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑CCTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGCTTACCTGACTCGTCGTCAGGTTGACGTGgc                             >  2:383007/1‑149 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCATTACTTCATCTCCACCCACGGCGCTCGTAAAGGTCTGTCGGATACCGCACTAAAAACTGCGAACTCCGGTGACCTGACTCGTCTTCTGTTTGACGTGgca                            >  2:793192/1‑148 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              >  2:792376/1‑147 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg                              <  1:792376/147‑1 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcg                            >  1:526755/1‑149 (MQ=255)
                                                                                                              tcGAAACGCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcg                            <  1:322762/149‑1 (MQ=255)
                                                                                                                     gCCAATCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGAcc                     >  2:500230/1‑149 (MQ=255)
                                                                                                                      ccAATCACCGCGAACTTCCGTGAAGCTCTGCAAAT‑TCGTCTGTTTTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGGCTCGTCGTCTGGTTGACGTGGCGCAGGACCt                    >  1:477974/1‑149 (MQ=255)
                                                                                                                        aaTCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg                  >  1:795993/1‑149 (MQ=255)
                                                                                                                        aaTCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtgg                  >  1:371432/1‑149 (MQ=255)
                                                                                                                         aTCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGACAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggt                 <  1:621248/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:158065/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  2:795993/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  2:820798/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:160639/149‑1 (MQ=255)
                                                                                                                          tCACCGCGAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:500230/149‑1 (MQ=255)
                                                                                                                              cgcgAACTTCCGTGAAGCTCTGAACGT‑ACTGCAGTACTTCATCTCCACCCACGATGCTCGTAAAGGTCTGGCAGCTACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCCGCACCTGGTGGTTa            >  2:598632/1‑149 (MQ=255)
                                                                                                                              cgcgAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTa            >  1:360641/1‑149 (MQ=255)
                                                                                                                                cgAACTTCCGTGAATCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATATCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTAcc          <  2:732415/149‑1 (MQ=255)
                                                                                                                                 gAACTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCg         >  1:606637/1‑149 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                >  2:113766/1‑140 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCtggtg                <  1:113766/140‑1 (MQ=255)
                                                                                                                                   aCTTCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGaa       <  1:909355/149‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg                                                                                          >  2:402335/1‑64 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTgg                                                                                          <  1:402335/64‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc                                                       <  1:54462/99‑1 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTAc                                                       >  2:54462/1‑99 (MQ=255)
                                                                                                                                     ttCCGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGa     >  2:789906/1‑149 (MQ=255)
                                                                                                                                        cGTGAAGCTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGa  <  1:75920/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                              
CTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGT‑ACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGA  >  NC_000913_3_hsa_tpiA/4187485‑4187769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑