| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 3376249 = | 58 (1.240) | 6 (0.140) | 6/256 | 5.1 | 10.3% | intergenic (+13/+30) | dcuD/sspB | putative transporter/ClpXP protease specificity enhancing factor |
| ? | NC_000913_3_hsa_tpiA | 3376278 = | 51 (1.200) | intergenic (+42/+1) | dcuD/sspB | putative transporter/ClpXP protease specificity enhancing factor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTCATC > NC_000913_3_hsa_tpiA/3376131‑3376422 | aGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑AGCCTGTTTTGTag > 1:63150/1‑148 (MQ=255) gAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTa < 1:555673/149‑1 (MQ=255) gAATTGCACGCGTTTCGCCATTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGAGTGCCACAATCACGTTGTTTTATTAGGTCATTAAAAAGACAAAGCGCGACGCCTG‑GGCCTGGTTGGTATTa > 2:699648/1‑149 (MQ=255) cGCCTTTTGCGGTGGTGCCGGGGTAAGCGATTCCCATGGCAGGCGGTTTCGTGGTGAATATGATTGCCACAATCACGTTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTaa < 2:780168/149‑1 (MQ=255) tggtgAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGacc > 2:300318/1‑149 (MQ=255) gtgAAGCGGACAGCGTTCCCCATGGCAGTCGTTTTCGTGGTGCATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTGCGGCCCGGTGTG‑AGTACTTCACAACTCGTAATGCCGGTCGaccac < 2:557104/149‑1 (MQ=255) aCAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCgtggtg < 1:300318/149‑1 (MQ=255) cGAACCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCTACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTGTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTg < 2:523852/149‑1 (MQ=255) gATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGc > 1:357430/1‑149 (MQ=255) cATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATCATGATAGTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGt < 1:809040/149‑1 (MQ=255) tGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTc < 2:645890/149‑1 (MQ=255) gtgAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCgtg > 2:562243/1‑116 (MQ=255) gtgAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCgtg < 1:562243/116‑1 (MQ=255) tgAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTCCTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGtc < 2:682305/149‑1 (MQ=255) tgAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGtc < 1:563004/149‑1 (MQ=255) tGATTGTGACAACCACGATATTTGAGTGAGGAAATAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCatcatc < 1:189122/149‑1 (MQ=255) gATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTca < 1:573000/78‑1 (MQ=255) gATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTca > 2:573000/1‑78 (MQ=255) gCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGAt > 2:470004/1‑149 (MQ=255) ccACAATCACGGTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGGCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATc < 1:552388/149‑1 (MQ=255) ccACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGtca > 2:766034/1‑138 (MQ=255) ccACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGtca < 1:766034/138‑1 (MQ=255) cacaATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAg > 2:649755/1‑132 (MQ=255) cacaATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAg < 1:649755/132‑1 (MQ=255) cacaATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCt < 2:357430/149‑1 (MQ=255) ctattaCGCTTTTTTTTTTAGTCAGTATAATGGCTAAGCTGGCTGTGTG‑GGGCTGTTTTGTATTACTTCGGGAGGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTgg < 1:23749/144‑1 (MQ=255) ctaTCACGCTATTTTATTATGTCATTAATAAGACTATACTGGGCGAATG‑GACTTGTTTTGTATTACTTCACATCGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTgg < 1:23782/147‑1 (MQ=255) caATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTgg < 1:92095/149‑1 (MQ=255) aaTCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGc < 2:15381/149‑1 (MQ=255) aaTCACGCTATTTTATTAAGTCAGTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGc < 2:247456/149‑1 (MQ=255) attaAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATTGTGATCTGGCTTGTCGCCATCAAt > 2:290009/1‑149 (MQ=255) taAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATaa < 1:675211/149‑1 (MQ=255) aaGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTgg > 1:375605/1‑131 (MQ=255) aaGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTgg < 2:375605/131‑1 (MQ=255) tCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAgt > 1:738847/1‑110 (MQ=255) tCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAgt < 2:738847/110‑1 (MQ=255) tCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGa > 1:235133/1‑149 (MQ=255) gcATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGa < 2:517134/148‑1 (MQ=255) aTTAAAAAAACAAAAAAGGGCGCCTG‑GGGCTGTTTTGTATAACTTCAAAACGCGTAATAGCGGGCGACCACCGCGTGGTGGCTGCGGAGGTTGCTCGTCCGGCAGAGTGTCATCATCGTGGTCTTGCATCTCTACACCACTAACCGACa > 2:746974/1‑149 (MQ=255) ttAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGa > 2:407405/1‑87 (MQ=255) ttAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGa < 1:407405/87‑1 (MQ=255) aaaaGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAAc > 2:495704/1‑149 (MQ=255) aaaaGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGAGTGGTGGCTGCGGAGGGTCGTCGTCATGATGAGTGTCATCATCGTGATCTGGCTTGTGCCGATCATTAACCGCAATAAc > 2:711907/1‑149 (MQ=255) aaGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGACGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACgg > 1:548796/1‑149 (MQ=255) gACAAGACACGGCGCGTG‑GGCCGGTCTTGTAGTATGTCACAACGCGAATCGCCGGTCGACCATGGCGTGGTGGCTTCGGTGGTTCCTTGTCAGGATGAGTGTTAGCATCGTGCTCTGGCTTGTCGCCATCAATAACCTACATAACGGtt < 2:272599/149‑1 (MQ=255) aaaaCAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCg > 2:580951/1‑149 (MQ=255) aaCAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGtt < 1:470004/149‑1 (MQ=255) aGGCCGTCTG‑GGCCTGTGTTGGAGTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTc < 1:672149/149‑1 (MQ=255) cTG‑GTCCTGTTTTGTATGACTTCACAACGAGTAATGCCGGTCGACCAGCGCGTGGTGCCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGAt < 2:604442/149‑1 (MQ=255) g‑ggCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGTTGc > 1:274970/1‑149 (MQ=255) g‑ggCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGc < 1:580951/149‑1 (MQ=255) ccTGTTTTGTATTACTTCACAACGGTTAATGCCGGTCGACCACGGCGTGGTTGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCctc < 2:548796/149‑1 (MQ=255) ccTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCctc > 1:60281/1‑149 (MQ=255) cTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATTAGTGTCATAATCGTGATCTGGCTTGTCGCCATCAATAACCGCCAGCACGGTTTCGTTGTCTGCCGATGCctct > 2:59408/1‑149 (MQ=255) cTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCctct > 1:624832/1‑149 (MQ=255) gTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTtc < 2:235133/149‑1 (MQ=255) ttttGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGGGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTtca > 1:34869/1‑149 (MQ=255) ttGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATAGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTTCCGGTGCCCCTtcatc > 2:269030/1‑149 (MQ=255) | AGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCGCCTG‑GGCCTGTTTTGTATTACTTCACAACGCGTAATGCCGGTCGACCACCGCGTGGTGGCTGCGGAGGTTCATCGTCAGGATGAGTGTCATCATCGTGATCTGGCTTGTCGCCATCAATAACCGACATAACGGTTTCGTTGTCTGCCGATGCCTCTTCATC > NC_000913_3_hsa_tpiA/3376131‑3376422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |