Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_hsa_tpiA 2,817,170 C→A E112* (GAA→TAA)  yqaB ← fructose‑1‑P and 6‑phosphogluconate phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_hsa_tpiA2,817,1700CA96.7% 92.0 / NA 30E112* (GAA→TAA) yqaBfructose‑1‑P and 6‑phosphogluconate phosphatase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base A (15/14);  minor base T (1/0);  total (16/14)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCCATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCGA  >  NC_000913_3_hsa_tpiA/2817037‑2817307
                                                                                                                                      |                                                                                                                                         
cccATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTAc                                                                                                                            >  1:444393/1‑149 (MQ=255)
 ccATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACa                                                                                                                           >  2:10536/1‑149 (MQ=255)
       gCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGGAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GCTGGCGCGTTACCGCCCCGTTCCTACAGCCAtt                                                                                                                     >  1:768587/1‑149 (MQ=255)
         tGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATACCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTgg                                                                                                                   <  2:721916/149‑1 (MQ=255)
          gcgcgcACAACAAAAATGTGTCTGGCGCGGGTCTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAAGAATGGCGTAATCCCAGGTGCGCCAGCAATTCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTggg                                                                                                                  <  1:245994/149‑1 (MQ=255)
              gcACAACAAAAATGTGTCTGGCGCGGGTTTGCGTTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGcgac                                                                                                              >  1:615800/1‑149 (MQ=255)
              gcACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAACTGATGGCGTAATCCCAGGGGGGCAAGCAATGCCTCAGC‑GATGGCGCTTTTACTCCACGTTCCTAGCGCCATTGGGcaga                                                                                                              >  2:269508/1‑146 (MQ=255)
                               cTGGCGCGGGTTTATGGTGTTTGCCGTGCTCCGCAGCCGCCGCGGACCCCAGCGAGTGGCGTAATCCATACTTGGTCAACCATGCCTAGCCTGAT‑GCTCGTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTc                                                                                             <  1:611374/149‑1 (MQ=255)
                                        gTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGt                                                                                                                                  <  1:132282/103‑1 (MQ=255)
                                        gTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGt                                                                                                                                  >  2:132282/1‑103 (MQ=255)
                                                    tGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGc                                                                        <  2:335638/149‑1 (MQ=255)
                                                       cGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGt                                                                     >  2:453072/1‑149 (MQ=255)
                                                           aTCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGa                                                                 >  1:723905/1‑149 (MQ=255)
                                                            tCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGAc                                                                >  1:148104/1‑149 (MQ=255)
                                                                cAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTa                                                            <  2:378662/149‑1 (MQ=255)
                                                                    gacgacGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCCCCACAGCAACAAGAGGAAGCGGTTCGACGCTATCca                                                        <  2:673284/149‑1 (MQ=255)
                                                                       gacgGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCcagca                                                     <  2:437863/149‑1 (MQ=255)
                                                                        acgGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCcagcag                                                    >  1:564409/1‑149 (MQ=255)
                                                                         cgGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCagcagc                                                   >  1:355526/1‑149 (MQ=255)
                                                                            cGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATa                                                <  2:444393/149‑1 (MQ=255)
                                                                             gTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTTTCCAGCAGCATAc                                               <  1:10536/149‑1 (MQ=255)
                                                                               aaaaaTAAGGGCGTAATCCCAGGTCCGCCAGCAATGCCGCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATActt                                             <  2:445610/148‑1 (MQ=255)
                                                                                   ataagGGCGGAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GCTGGCGCTTTAACTCCCCGTTCCTACGGCCAGTGGGCGACGACCATGCCAACTTCTCACCACATCAACAACAGGAAGCGGCTCGACGCTATCCAGCCGCAAACTCCTTa                                         <  2:817125/149‑1 (MQ=255)
                                                                                      atGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCCTACTTCTTACTg                                      >  1:513152/1‑149 (MQ=255)
                                                                                            tAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGTTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTg                                >  2:214178/1‑149 (MQ=255)
                                                                                               tCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGttt                             >  1:386489/1‑149 (MQ=255)
                                                                                                 ccAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGttttt                           <  1:486817/149‑1 (MQ=255)
                                                                                                 ccAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACCGCTTCTGttttt                           >  2:187038/1‑149 (MQ=255)
                                                                                                   aGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTc                         >  1:755410/1‑149 (MQ=255)
                                                                                                                           gATGGCCCTTTAACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCga  <  1:83352/149‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                         
CCCATACGCTGCGCGCACAACAAAAATGTGTCTGGCGCGGGTTTATGGTGTTTGACGTGATCGGCAGCGACGACGGCGTCAAAATAATGGCGTAATCCCAGGTGCGCCAGCAATGCCTCAGC‑GATGGCGCTTTCACTCCCCGTTCCTACAGCCATTGGGCGACGACCATGCCAACTTTTCACCACATCAACAAGAGGAAGCGGTTCGACGCTATCCAGCAGCATACTTCTTACTGCTTCTGTTTTTTCACGCGCTAACGCATGCGGGTCGA  >  NC_000913_3_hsa_tpiA/2817037‑2817307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑