New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 11450528 (0.670)5 (0.130) 5/258 4.8 16.8% intergenic (+18/+17) guaC/hofC GMP reductase/assembly protein in type IV pilin biogenesis, transmembrane protein
?NC_000913_3_hsa_tpiA = 114511 24 (0.620)intergenic (+24/+11) guaC/hofC GMP reductase/assembly protein in type IV pilin biogenesis, transmembrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATTTTGGGCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTCCAGTAAGGCTGCGAGGTTATCCGCCAGCGCCAT  >  NC_000913_3_hsa_tpiA/114364‑114659
                                                                                                                                                   |                                                                                                                                                    
tatTTTGGGCGGCCTGAGTTCAGCTTGTACATACGTTCGGGCTTCACGCCTGAAAGAGCAGACCAAGCGCACCACGTATATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAac                                                                                                                                                     <  2:681818/149‑1 (MQ=255)
  ttttGGGCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGCAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAacac                                                                                                                                                   >  1:653991/1‑149 (MQ=255)
      gggCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCa                                                                                                                                               >  1:466056/1‑149 (MQ=255)
           gcCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGtt                                                                                                                                          >  1:413402/1‑149 (MQ=255)
               gCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGTTGCTCCACGCCAGCGttggga                                                                                                                                      <  1:348144/149‑5 (MQ=255)
                   tCACCTTGTACATACGTGGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTatcccatc                                                                                                                                  <  2:135156/149‑1 (MQ=255)
                   gcAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGGACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTCCCACAACCTGTAATCCCCCAACGCTGGCGTGGAGAAACCCGCCAGCGTTatgccatc                                                                                                                                  <  2:550465/148‑1 (MQ=255)
                       cTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCAc                                                                                                                              <  1:481144/149‑1 (MQ=255)
                         tGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTc                                                                                                                            <  1:498203/149‑1 (MQ=255)
                                                 cTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTACATGGAAAAtt                                                                                                    >  2:661877/1‑149 (MQ=255)
                                                         gCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATa                                                                                            <  2:464105/149‑1 (MQ=255)
                                                                      accacGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGccaccacc                                                                               >  1:350700/1‑149 (MQ=255)
                                                                              tATTCGTGCGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCCTCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTAcc                                                                       <  1:92606/149‑1 (MQ=255)
                                                                                   gtgtGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCaataa                                                                  >  1:393673/1‑149 (MQ=255)
                                                                                        cAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATtcct                                                             <  2:653991/149‑1 (MQ=255)
                                                                                            aaCAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCaataat                                                                 <  1:170866/141‑1 (MQ=255)
                                                                                            aaCAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCaataat                                                                 >  2:170866/1‑141 (MQ=255)
                                                                                            aaCAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCg                                                         <  1:393503/149‑1 (MQ=255)
                                                                                                aGAAACGCGTATCTTCAACAACCTGTAATCTCCCAGCGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCTGCGTACCAATAATTCCTCCCGTTAt                                                     <  2:372826/149‑1 (MQ=255)
                                                                                                aGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACAACAGACAGGTCGGGCAGCGCACGGTTCGTATCTCCTAAATGACAGATTGCAAAGGACGTTGCCACCACCAGCGTACCAATAATTCGTCCCGtaag                                                     >  1:547092/1‑146 (MQ=255)
                                                                                                      ccGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCTTCCCGTTATGATCAg                                               >  1:630242/1‑149 (MQ=255)
                                                                                                       cGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGAGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGc                                              >  1:212990/1‑149 (MQ=255)
                                                                                                        gCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCa                                             >  1:641092/1‑149 (MQ=255)
                                                                                                                 acaacCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTACCACCACCAGCGTACCACTCATGCTGCCCACTAGGATCAGCAACGCCgggt                                    >  2:672536/1‑147 (MQ=255)
                                                                                                                   aacCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTcc                                  <  1:566861/149‑1 (MQ=255)
                                                                                                                       tGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTCCAGTa                              >  2:736414/1‑149 (MQ=255)
                                                                                                                             ctcCCAACGCTGGCGTGGAGCAACACGCCCGCGTTATCCCATCCCACTCTTCGCATCCCCTAAATGCAAAAGGGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCATCGCCGGATCCAGTAAGCCTg                        >  2:598601/1‑149 (MQ=255)
                                                                                                                                      cTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTCCAGTAAGGCTGCGAGGTTAt               >  1:714705/1‑149 (MQ=255)
                                                                                                                                                   acacGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTCCAGTACGGCTGCGAGGTTATCCGCCAGCGCCAt  >  1:490446/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TATTTTGGGCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAATCTCCCAACGCTGGCGTGGAGCAACACGCCAGCGTTATCCCATCCCACTCATCGCATCGCCTAAATGGAAAATTGGCAGATACATTGCCACCACCAGCGTACCAATAATTCCTCCCGTTATGATCAGCAACGCCGGTTCCAGTAAGGCTGCGAGGTTATCCGCCAGCGCCAT  >  NC_000913_3_hsa_tpiA/114364‑114659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.