New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 4094467 =147 (3.070)5 (0.110) 5/276 5.9 3.5% noncoding (152/402 nt) REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
?NC_000913_3_hsa_tpiA 4094647 = 130 (2.820)noncoding (332/402 nt) REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences REP299 (repetitive extragenic palindromic) element; contains 9 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 135 total aligned reads displayed.

TAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGC  >  NC_000913_3_hsa_tpiA/4094501‑4094792
                                                                                                                                                   |                                                                                                                                                  
tAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑Gt                                                                                                                                                 <  1:661912/149‑1 (MQ=35)
tAGGCCGGATAAGGCACTTGGGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGCCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑Gt                                                                                                                                                 <  1:722679/149‑1 (MQ=21)
 aGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTc                                                                                                                                                <  2:304817/149‑1 (MQ=34)
   gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTcgc                                                                                                                                              >  1:367722/1‑149 (MQ=34)
   gCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTcgc                                                                                                                                              >  1:461975/1‑149 (MQ=35)
        aTAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCtt                                                                                                                                         >  2:764794/1‑149 (MQ=32)
             gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGAGGCTGTCGCGTCTTATCCGGCCTACAACTATTGCGGACCTGTAGGCCGGATAAGGCACTTTTGCGGCATCCG‑GCAGTGCATGCTTGATGGGGGGCT‑GTCGCTGTTTATCat                                                                                                                                    >  2:476987/1‑148 (MQ=11)
             gCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAg                                                                                                                                    >  1:832519/1‑149 (MQ=32)
              cACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATCCCTGATGCGACGCT‑GTCTCGTCTTCTCAgg                                                                                                                                   >  2:345841/1‑149 (MQ=12)
               aCTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGc                                                                                                                                  >  1:278281/1‑149 (MQ=32)
                 ttGTACCGCATCCGGCAACCAATTCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTCCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCCGGACt                                                                                                                                <  2:639897/149‑1 (MQ=11)
                       cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACt                                                                                                                          >  1:233288/1‑149 (MQ=32)
                        gCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTg                                                                                                                         >  1:266474/1‑149 (MQ=32)
                         cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGACTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGt                                                                                                                        <  2:260361/149‑1 (MQ=17)
                           tCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCCATGCCTGGTGCCGCGCT‑GTTGCATCCTATCCGACCTTCACCTgcga                                                                                                                      >  2:122293/1‑146 (MQ=11)
                            ccGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGc                                                                                                                     <  2:278281/149‑1 (MQ=32)
                             cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGcc                                                                                                                    >  1:352986/1‑149 (MQ=32)
                             cGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCCGATGCGACGCC‑GTCGCGCCTTACCAGGCCTACCACTGTTGcc                                                                                                                    >  2:403704/1‑149 (MQ=11)
                              ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATc                                                                                                                                      <  1:759202/130‑1 (MQ=33)
                               gCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATGAATGCCTGATGCGACGCT‑GTCAGGTCTTGTCAGGCCTACAACTGTTGCCGa                                                                                                                  >  1:349684/1‑149 (MQ=255)
                                 aatcaatGCCTGATGCGCCGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGACGCGACCCT‑GTCGCGCCTCATCACGCCGACGACTCTTCCCGccc                                                                                                                >  2:648531/1‑149 (MQ=11)
                                       tGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCGCTTGTGCCGCATCCG‑GCAATCAATGCCTGCTGCGACGCT‑GTCGCGCCTTATCAGCCCTACACCGGTTCCCGACCCCTAgg                                                                                                          >  2:95803/1‑149 (MQ=11)
                                       tGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGc                                                                                                                     <  1:744013/138‑1 (MQ=33)
                                          cTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCg                                                                                                       <  1:301043/149‑1 (MQ=35)
                                            gATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGa                                                                                                     <  1:636792/149‑1 (MQ=35)
                                                tgctgCTCTCGCGTCTTATCCGGCCTACACCTATTGCCGCCATGAAGGTCGGATAAGGAACTTGTGCCGCATCCG‑GCAACCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAg                                                                                                 <  1:798378/145‑1 (MQ=11)
                                                ctaCGCTGTCCCGTCTTATCAGGCCTCTAACTATTGCCGACCATTAGGCCTGTTAAGTTACTTCTGCGGCCTACGCAGAATCAGT‑CTCAACCCGACGCG‑ATCGATAATAACCAGGCCTACAACCGACACCGACCCGTAGGCCGGATAAg                                                                                                 <  2:801393/147‑1 (MQ=255)
                                                cgcggcggTCTCGTTTTATCAGGGCTTCTATTATTATCGACCGGTAGGCCCGATAAGGCACTTGGGCCGCATCCG‑GCAATCAATGCCTGACGCGACGCT‑GTCGCGTCATATCAGGCCTAGAACTGTTGCCGACCCGTAGGCCGGATAAg                                                                                                 <  2:80949/142‑1 (MQ=11)
                                                cGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCAACAACTTTTGCCGACCCGTAGGCCGGATAAg                                                                                                 <  1:826095/149‑1 (MQ=25)
                                                 gACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTATAGGCCGGATAAGGCACTTGTGCCGCATGCG‑CCAATCAATGCCTGATCCGCCGCT‑GACGCGTCTTATCAGGCCCACAACAGTTGCCCACCCGAGAGCCCGATAAgg                                                                                                >  2:112525/1‑149 (MQ=11)
                                                     cTGTCGCTGCCTATCAGGGCTACGACTATTTCCGCCGTGTAGTCCGGATAAGGCATTTGTGCCGCATCCG‑GCAATCAATTCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCt                                                                                            <  2:364721/149‑1 (MQ=11)
                                                      gacagcgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAg                                                                                                 <  2:471698/139‑1 (MQ=25)
                                                          gcgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCgcgc                                                                                       <  1:669382/149‑1 (MQ=255)
                                                          gcgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCgcgc                                                                                       >  1:25361/1‑149 (MQ=40)
                                                           cgTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATCTGGAACTACGGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                      <  1:609579/149‑1 (MQ=14)
                                                             tCTTATCAGGCCTACAACTATTGCTGACCTGTAGGCCTGATAAGGCACTTGTTCCGCATCCG‑GCAATCAACGCCTGATGCGACGCT‑GTCGCGTGTTATCAGGCCTACAACTGTTGCCGACCCGTACGCCGTATAAGGCGCTCGcgccgc                                                                                    <  1:769162/149‑1 (MQ=14)
                                                             tCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGcgccgc                                                                                    >  1:18345/1‑149 (MQ=255)
                                                              cTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGgcg                                                                                              >  1:597751/1‑138 (MQ=37)
                                                              cTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGgcg                                                                                              <  2:597751/138‑1 (MQ=35)
                                                                 aTCAGGCCTACAACTGTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATcc                                                                                >  2:481863/1‑149 (MQ=255)
                                                                  tCAGGCCTACAACTTTTGCCGCCCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCg                                                                               <  1:661344/149‑1 (MQ=255)
                                                                    aGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTAt                                                                                                                                       >  1:366760/1‑91 (MQ=34)
                                                                    aGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTAt                                                                                                                                       <  2:366760/91‑1 (MQ=34)
                                                                    aGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGc                                                                                                                     <  1:178839/109‑1 (MQ=33)
                                                                        cTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAgtg                                                                         <  2:25361/149‑1 (MQ=255)
                                                                          aCAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGtt                                                                       >  1:477689/1‑149 (MQ=255)
                                                                            aaCTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTa                                                                     >  1:5714/1‑149 (MQ=255)
                                                                               tgttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATaa                                                                                                  >  1:215960/3‑117 (MQ=21)
                                                                               tgttGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATaa                                                                                                  <  2:215960/115‑1 (MQ=25)
                                                                               tATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGGCCCGTCGGCCGCATAAGGCGCTCGCGCCGCATCCGGCGGTGTTTcccc                                                                  >  2:592973/1‑149 (MQ=14)
                                                                               tATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAccc                                                                  >  1:667079/1‑149 (MQ=255)
                                                                                aTTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCCGTGTTTACCcg                                                                 >  2:528880/1‑149 (MQ=255)
                                                                                   gCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCCTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCgcgg                                                              <  2:283884/149‑1 (MQ=255)
                                                                                      ggccTGTAGGCCGGATAAGGCACTTGTGCAGAATCAG‑GACTTCAATGCAT‑AAAAGACGATGGACTCGCCATATACGGACTACAGCTGTTGCTGACGCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGa                                                           <  2:177017/147‑1 (MQ=16)
                                                                                         cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTc                                                        >  2:709210/1‑149 (MQ=255)
                                                                                         cTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACGGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTc                                                        <  1:263339/149‑1 (MQ=255)
                                                                                          tGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGcc                                                                                                                    <  2:100086/88‑1 (MQ=33)
                                                                                            tAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGa                                                                                                     <  2:807307/101‑1 (MQ=38)
                                                                                            tAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCCGCAGTGTTTACCCGCGGCGACTCaca                                                     >  2:304982/1‑147 (MQ=255)
                                                                                             aGGCCGGATAAGGCATTGGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCaaaa                                                    <  1:274023/149‑1 (MQ=255)
                                                                                              ggCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTCGGCCGGATAAGGCGCTCGCGCCGCATCCCGCAGTGTTTACCCGCGGCGACCCAAAAt                                                   >  2:170463/1‑149 (MQ=255)
                                                                                               gCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCCTCAGGCAGTGTTTACCCGAGGGGACTCAAAAtt                                                  >  1:130221/1‑149 (MQ=255)
                                                                                                 cGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTCCCCGCGGCGACTCCAAAtttc                                                >  2:752703/1‑149 (MQ=255)
                                                                                                   gATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGGCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctt                                              <  2:681527/149‑1 (MQ=255)
                                                                                                    aTAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                             <  1:641790/149‑1 (MQ=255)
                                                                                                    aTAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttcttt                                             <  1:664817/149‑1 (MQ=255)
                                                                                                    aTAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGAAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACCCAAAAtttcttt                                             >  2:203445/1‑149 (MQ=255)
                                                                                                        ggCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCa                                         >  1:129881/1‑149 (MQ=255)
                                                                                                         gCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCCAAATTTCTTTcacaa                                        >  2:85662/1‑148 (MQ=255)
                                                                                                           aCTTGTGCCGCATACG‑GCAATCAATGACTGATGCGACGCA‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCCACCCGTAGGCCGAATAAGTCGCTCGCGCCTCATCCGGCATTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATaa                                      <  2:616485/149‑1 (MQ=21)
                                                                                                                  ccGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCa                               >  2:427198/1‑149 (MQ=255)
                                                                                                                   cGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCAc                              <  1:345841/149‑1 (MQ=255)
                                                                                                                   cGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCAc                              >  1:691775/1‑149 (MQ=255)
                                                                                                                   cGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCAc                              >  2:493470/1‑149 (MQ=255)
                                                                                                                     cATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGCCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCGCATAACCCCCCACGc                            >  2:173401/1‑149 (MQ=255)
                                                                                                                      aTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCTTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGGGACTCAAAATTTCTTTCTCATAAGCCCGCCCGct                           >  2:377279/1‑149 (MQ=255)
                                                                                                                      aTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTa                                                                                                            <  1:772245/68‑1 (MQ=35)
                                                                                                                      aTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGCCTCAAAATTTCTTTCTCATAAGCCCGCACGct                           >  2:733275/1‑149 (MQ=255)
                                                                                                                      aTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctttc                                            >  2:434951/1‑132 (MQ=255)
                                                                                                                      aTCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAAtttctttc                                            <  1:434951/132‑1 (MQ=255)
                                                                                                                       tCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGAATCAAAATTTCTTTCTCATAAGCCCGCACGctc                          <  2:77773/149‑1 (MQ=255)
                                                                                                                       tCCG‑GCAATCAATGCCTGATGCCCCCCC‑AGCGCATCTTATCAAGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCCACTCAAAATTTCTTTCTCATAAGCCCGCACGctc                          >  2:392967/1‑149 (MQ=25)
                                                                                                                         cG‑GCAATCAATGGCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCtctc                        <  1:774441/149‑1 (MQ=255)
                                                                                                                         cG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTTTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCtctc                        <  1:558743/149‑1 (MQ=255)
                                                                                                                          g‑gCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCTTAGGCCGGATAAGGCGCTCGCGCCGCATACGGCAGTGGTTACCCGCGGCGGCTCAAAATTTCTTTCTGATAGGCCCGCCCActccac                       >  2:359739/1‑146 (MQ=18)
                                                                                                                          g‑gCAAGCAATGCCTGAGGCTACGCT‑GTCGCTTTTTTTCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTcc                       <  2:646754/149‑1 (MQ=25)
                                                                                                                            tgaatcaatGGTTGAGGCGCCGTT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCa                      <  2:351573/147‑1 (MQ=25)
                                                                                                                                tcaatGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGgc                                                                                               <  1:102934/72‑1 (MQ=35)
                                                                                                                                tcaatGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGctc                          <  1:312278/141‑1 (MQ=255)
                                                                                                                                 caatGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATGCGGCGCGAGCGCCTTATCCgg                                                                              <  1:655336/88‑1 (MQ=11)
                                                                                                                                  aatGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTATGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCAtt                <  1:747290/149‑1 (MQ=255)
                                                                                                                                      ccTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAc                                                                    <  1:204758/93‑1 (MQ=255)
                                                                                                                                      ccTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTAc                                                                    >  2:204758/1‑93 (MQ=255)
                                                                                                                                      ccTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCt            >  1:535326/1‑149 (MQ=255)
                                                                                                                                        tGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTAc          <  1:403704/149‑1 (MQ=255)
                                                                                                                                              gACGCT‑GTCGCGTCTTATCAGGCCTACACAAGAACCTTGCCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAACCCGACCACTCTCCAGCCATTACCGACctgctt    >  2:391363/1‑148 (MQ=25)
                                                                                                                                              gACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACctgctg    >  2:230964/1‑149 (MQ=255)
                                                                                                                                              gACGCT‑ATCGCGTCTTATCAGGCCTACAACTGTTGCAGACCCGTAGGCCGGATAAGGCGCTGGCCCCGCATCCGGCAGTGTTTAGCCGCGGCGCCTCAAAATTTCTTTCTCATAAGCCCGCCCGCTCTCCAGCCATTCGCTCCctgctt    >  2:324044/1‑148 (MQ=25)
                                                                                                                                              accGCT‑GTCCCGGCTTATCAGTCTTAGAACGCTTGCCGACCCGTCGGCCGGATAAGGCGCTTGCGCCGCCTCCGCTAGTGTTTACCCGCGCCTATTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACctgctg    <  2:19687/147‑1 (MQ=255)
                                                                                                                                                cGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGc  <  1:481863/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TAGGCCGGATAAGGCACTTGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAACTATTGCCGACCTGTAGGCCGGATAAGGCACTTGTGCCGCATCCG‑GCAATCAATGCCTGATGCGACGCT‑GTCGCGTCTTATCAGGCCTACAACTGTTGCCGACCCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTGTTTACCCGCGGCGACTCAAAATTTCTTTCTCATAAGCCCGCACGCTCTCCAGCCATTCGCTACCTGCTGGC  >  NC_000913_3_hsa_tpiA/4094501‑4094792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.