New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 4136014	90 (1.880)	5 (0.110)	5/268	5.8	5.4%	intergenic (+17/‑76)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
	?	NC_000913_3_hsa_tpiA	= 4136030	91 (2.030)					intergenic (+33/‑60)	katG/yijE	catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAA  >  NC_000913_3_hsa_tpiA/4135882‑4136178                                                                                                                                                      |                                                                                                                                                     tCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATCAACCTCGATCGTTTCCATCTGCGGGAATCTGACCCCGTTCAC‑CGGCTGCTTCCTGGCAGt                                                                                                                                                      >  2:507235/1‑149 (MQ=255)  cttgtgtgcgGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACTAGAAGTTTGTTAAAGACTGCGTGGCGGCATGGGTGAAAGTGATGACCCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTc                                                                                                                                                     <  1:37166/144‑1 (MQ=255)    tgcgtgcgGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCGGCTTGCTGGCAGTCGc                                                                                                                                                   >  1:443668/1‑149 (MQ=255)     gcgtgcgGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCCTGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTTGAATCGGACCCCGGTCAG‑CGGCGGCTTGCTGGCAGTCGCt                                                                                                                                                  >  2:490110/1‑149 (MQ=255)         gcgGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCCTGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAAc                                                                                                                                              <  2:488789/149‑1 (MQ=255)             tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGACTGCCAGCAAGCAGCCGCTGAACgg                                                                                                                                            <  2:485912/147‑2 (MQ=38)             tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGACTGCCAGCAAGCAGCCGCTGAACgg                                                                                                                                            >  1:485912/1‑146 (MQ=38)             tGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGCTGGCAGGGGGGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCACGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTc                                                                                                                                          >  1:745046/1‑149 (MQ=255)               gCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTCAATGATTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCtt                                                                                                                                        <  1:780174/149‑1 (MQ=255)                cGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCttt                                                                                                                                       <  1:397650/149‑1 (MQ=255)                 ggAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCtttc                                                                                                                                      >  1:56812/1‑148 (MQ=255)                 ggAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTa                                                                                                                                      >  1:761812/1‑149 (MQ=255)                   aaGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTAcc                                                                                                                                    >  1:280042/1‑149 (MQ=255)                     gTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAg                                                                                                                                  >  1:354683/1‑149 (MQ=255)                      tttACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGc                                                                                                                                 >  1:422784/1‑149 (MQ=255)                      tttACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGc                                                                                                                                 >  1:406964/1‑149 (MQ=255)                      tttACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGGGAGAGTGATGAACCTCGACCGTTTCGACCTCCCGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCCGTCGCTGACCGATCTTTACCCGc                                                                                                                                 >  2:65386/1‑149 (MQ=255)                         aCGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGACAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAAAGGTCTTTACCCGcagg                                                                                                                              >  1:362142/1‑146 (MQ=255)                          cGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGtat                                                                                                                             >  1:505496/1‑149 (MQ=255)                            ccAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGCAACTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTGAG‑AGGCTGCTTGCTGCCAGTCGCTGAGCGCTCTTTAACAGCGtctgt                                                                                                                           >  2:426638/1‑145 (MQ=255)                             cAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGCCTGCTTGCTGGCAGTCGCCGAACGTTCTTTACCAGCggctagg                                                                                                                          >  1:443059/1‑143 (MQ=255)                                tAGCGATGCCCACGGTAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTTAACGTTCTTTACCAGCGTATAGTggg                                                                                                                       <  2:273401/149‑1 (MQ=255)                                    gATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACAGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaa                                                                                                                   <  2:460056/149‑1 (MQ=255)                                     aTGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGCTGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTCGCAGTCGCCCAACGTTCTTTACCAGCGTATCGTGGGcgcac                                                                                                                  >  2:488985/1‑149 (MQ=255)                                     aTGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAAGCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑GGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCGGGGTATAGGGGGagaac                                                                                                                  >  1:28565/1‑149 (MQ=255)                                     aTGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaac                                                                                                                  >  1:595134/1‑149 (MQ=255)                                        cccACGAGAGGTTTGTTAAAGACGTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACGCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTTGGcgaacgaa                                                                                                               <  2:197185/149‑1 (MQ=255)                                         ccACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTCCCAGCGTATAGTGGGCGAACGaaa                                                                                                              >  1:109720/1‑149 (MQ=255)                                               gaAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGCACGAACATCTCTGTGACCTGCTGTAATCTGACCCCGTTCAG‑GGGCTGCTTGCTGGCAGGCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTaca                                                                                                        <  1:24700/149‑1 (MQ=255)                                               gaAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTaca                                                                                                        <  1:100518/149‑1 (MQ=255)                                                aaGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTacac                                                                                                       >  2:2316/1‑149 (MQ=255)                                                       ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                >  2:756163/1‑149 (MQ=255)                                                       ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGACGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCCTTCAG‑CGGCTGCTTGCTGGCAGTCGCTTAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                <  2:74162/149‑1 (MQ=255)                                                       ttAAAGACTTCGTGGCGGCATGGGTGAAAGGGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGTTCAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                <  1:374961/149‑1 (MQ=255)                                                        tAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtc                                                                                               >  1:118052/1‑149 (MQ=255)                                                         aaaGACTGCGTGGCGGCATGGGTGAAAGTGAGGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTGCCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtct                                                                                              <  1:659494/149‑1 (MQ=255)                                                          aaGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCGGCTTGCTGGCAGTCCATGCCGCCGCTCGACAAGAGTCTGCTGAGCAAACGAAAACTACACACTGGAtctc                                                                                             >  1:609580/1‑149 (MQ=255)                                                           aGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGTAGTCGc                                                                                                                                                   <  2:199961/94‑1 (MQ=255)                                                           aGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGTAGTCGc                                                                                                                                                   >  1:199961/1‑94 (MQ=255)                                                           aGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctct                                                                                            >  1:565628/1‑149 (MQ=255)                                                                  gTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCt                                                                                     >  1:462472/1‑149 (MQ=255)                                                                    ggcggcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGc                                                                                   <  2:582714/149‑1 (MQ=255)                                                                        gcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCa                                                                               <  1:809423/149‑1 (MQ=255)                                                                          aTGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATCGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTTTGCCGCAgg                                                                             >  1:686591/1‑149 (MQ=255)                                                                             ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCGTGTCTGCGTCAGGaaa                                                                          >  1:68332/1‑149 (MQ=255)                                                                             ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGaaaa                                                                          >  2:666925/1‑149 (MQ=255)                                                                             ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGaaa                                                                          <  1:420082/149‑1 (MQ=255)                                                                             ggTGAAAGTGATGAACCTCGACCGTCTCTACTTGCTGTAATCT‑ACTACGTCGGGTCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGaaa                                                                          <  1:609308/149‑1 (MQ=255)                                                                              gTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAag                                                                         <  1:1141/149‑1 (MQ=255)                                                                                gAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCCGCGTATAGTTGGCGACCGAACACTACACACTGGATCTCCCATGTCTGCCGCAGGAAagag                                                                       >  2:496726/1‑149 (MQ=255)                                                                                   aGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCaa                                                                    <  2:584694/149‑1 (MQ=255)                                                                                    gTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAc                                                                   <  1:301489/149‑1 (MQ=255)                                                                                     tgatgaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAcc                                                                  <  1:2316/149‑1 (MQ=255)                                                                                         gaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACt                                                              <  2:565628/149‑1 (MQ=255)                                                                                         gaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACt                                                              >  1:75613/1‑149 (MQ=255)                                                                                             cTCGACCGTTTTGACCTGCTGGAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCa                                                          <  2:745046/149‑1 (MQ=255)                                                                                             cTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCg                                                                                 >  2:409279/1‑126 (MQ=255)                                                                                             cTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCg                                                                                 <  1:409279/126‑1 (MQ=255)                                                                                              tCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCaa                                                         >  2:443522/1‑149 (MQ=255)                                                                                               ctaCCGTTTCGACTTGCTGTAAGCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTAGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCAGGTCTGCCGCAGGAAAGAGCAACCCACTGGCAAt                                                        <  2:28565/147‑1 (MQ=255)                                                                                                  ccGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAg                                                     >  2:92614/1‑149 (MQ=255)                                                                                                   cGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAAt                                                        >  1:321351/1‑145 (MQ=255)                                                                                                   cGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAAt                                                        <  2:321351/145‑1 (MQ=255)                                                                                                   cGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGt                                                    <  1:669285/149‑1 (MQ=255)                                                                                                     tttCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTgg                                                  >  1:30847/1‑149 (MQ=255)                                                                                                         gACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                <  2:242554/99‑1 (MQ=255)                                                                                                         gACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAt                                                                                                >  1:242554/1‑99 (MQ=255)                                                                                                         gACCGGCTGTAAGCTGACCCCGTTCAG‑CGGTTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTg                                              <  2:149426/149‑1 (MQ=255)                                                                                                           ccTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAaga                                                                        >  2:187766/1‑121 (MQ=255)                                                                                                           ccTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAaga                                                                        <  1:187766/121‑1 (MQ=255)                                                                                                            ctgctgTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGAAGTTGATGCACGCTATTAACCTGATCATAGCGGGCGAACGAAACTTACACGGGCGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGtt                                           <  2:595134/149‑1 (MQ=255)                                                                                                              gctgTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTtgt                                         >  2:642566/1‑149 (MQ=255)                                                                                                               ctgTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTtgtg                                        <  2:280042/149‑1 (MQ=255)                                                                                                                tgTAATCTGACCCCGTTCAG‑CGGCTGCTTGGTGGCCGCTTCAGGAGGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGc                                       >  1:411687/1‑149 (MQ=255)                                                                                                                tgTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCCGTGGCCTGGTTGTGc                                       >  2:447221/1‑149 (MQ=255)                                                                                                                tgTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGc                                       <  1:642566/149‑1 (MQ=255)                                                                                                                 gTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctctc                                                                                           <  1:71596/96‑1 (MQ=255)                                                                                                                 gTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctctc                                                                                           >  2:71596/1‑96 (MQ=255)                                                                                                                     tCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTcaca                                  <  1:195884/149‑1 (MQ=255)                                                                                                                     tCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTcaca                                  <  1:451577/149‑1 (MQ=255)                                                                                                                      cTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTACCCTGTGCATATTTGGCGAACGAAAACTACACACGGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCacac                                 <  1:403907/149‑1 (MQ=255)                                                                                                                        gACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACtt                               >  1:118109/1‑149 (MQ=255)                                                                                                                           cccGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATc                            >  2:697800/1‑149 (MQ=255)                                                                                                                            ccGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCGCACTTATCt                           >  1:223876/1‑149 (MQ=255)                                                                                                                                 cAG‑CGTCGGCTGGCTGGCAGTCTCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTTGTTGTGCTCACACTTATCTGGAGt                      <  1:453173/149‑1 (MQ=255)                                                                                                                                        ctgctTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGc                >  2:86653/1‑149 (MQ=255)                                                                                                                                          gcttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTg              >  2:480378/1‑149 (MQ=255)                                                                                                                                           cttgctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGGTATAGCTgg             >  2:277776/1‑149 (MQ=255)                                                                                                                                             tcctGGCAGTCGCCGAACGGTCTTTTCCAGCGTATCGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGCCACAGCACCCTTCTTGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGAt           <  1:655643/147‑1 (MQ=255)                                                                                                                                              gctGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGAtt          <  2:509285/149‑1 (MQ=255)                                                                                                                                                 ggCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTc       <  2:406964/149‑1 (MQ=255)                                                                                                                                                  gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTCTCTGGGTTTATAGCTGGAttctaa      >  1:813077/1‑145 (MQ=255)                                                                                                                                                  gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa      <  1:507235/149‑1 (MQ=255)                                                                                                                                                  gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa      >  1:556409/1‑149 (MQ=255)                                                                                                                                                  gCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGAAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTATGCTCACACTTATCTGGAGTTATAGCTGGATTTTCa      >  2:716650/1‑149 (MQ=255)                                                                                                                                                    aGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATg    >  1:241819/1‑149 (MQ=255)                                                                                                                                                     gTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGa   <  2:462472/149‑1 (MQ=255)                                                                                                                                                      tCGCTGAACGTTTCTTACCAGCGTATAGTGGGCGAACGAAAACTACACACGGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGaa  <  2:142437/149‑1 (MQ=255)                                                                                                                                                      tCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTg                                                             <  1:267772/90‑1 (MQ=255)                                                                                                                                                      tCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTg                                                             >  2:267772/1‑90 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAG‑CGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAA  >  NC_000913_3_hsa_tpiA/4135882‑4136178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.