New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 752206	31 (0.880)	4 (0.120)	4/268	4.3	12.4%	intergenic (‑37/+23)	ybgQ/ybgD	putative outer membrane protein/putative fimbrial‑like adhesin protein
	?	NC_000913_3_hsa_tpiA	= 752212	27 (0.800)					intergenic (‑43/+17)	ybgQ/ybgD	putative outer membrane protein/putative fimbrial‑like adhesin protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTCTGATGAGCTTGCATCCA  >  NC_000913_3_hsa_tpiA/752073‑752353                                                                                                                                      |                                                                                                                                                    ttGATTTATCGAGAACATTCAGATTGAATACGACCGCCATTGCGCTAGGCAGCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTTCATACCTGCTAAATATTTTATGAAAGGCGGCGATGATGCCGCCaaa                                                                                                                                      <  2:442947/149‑1 (MQ=255)     tttATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAaataa                                                                                                                                  >  1:135016/1‑149 (MQ=255)       tATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATgccgc                                                                                                                                          >  1:126147/1‑139 (MQ=255)       tATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATgccgc                                                                                                                                          <  2:126147/139‑1 (MQ=255)         tCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACt                                                                                                                              >  2:559515/1‑149 (MQ=255)                  ttCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATaa                                                                                                                     <  1:540072/149‑1 (MQ=255)                             ttCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTa                                                                                                          >  1:191382/1‑149 (MQ=255)                                     ccATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGt                                                                                                  <  1:559515/149‑1 (MQ=255)                                        tggcgcAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAg                                                                                               <  1:225881/147‑1 (MQ=255)                                                   aTCGCCATGAACAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATAACTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCa                                                                                    <  2:315458/149‑1 (MQ=255)                                                       ccATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTg                                                                                >  1:467922/1‑149 (MQ=255)                                                          tGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCg                                                                             <  2:120575/149‑1 (MQ=255)                                                                      aTACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGc                                                                                              <  2:353714/120‑1 (MQ=255)                                                                      aTACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGc                                                                                              >  1:353714/1‑120 (MQ=255)                                                                        aCAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCCCCTGCCGTGACATCGACTGCa                                                               >  2:81533/1‑149 (MQ=255)                                                                          aaaaGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATgcc                                                                                                                                            <  2:291670/70‑1 (MQ=255)                                                                          aaaaGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATgcc                                                                                                                                            >  1:291670/1‑70 (MQ=255)                                                                            aaGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTAt                                                           >  1:452747/1‑149 (MQ=255)                                                                               agagTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCAGCGATGATGCCGCCAAAATAAGACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGCCTGCATTATCaa                                                        >  1:121828/1‑149 (MQ=255)                                                                                     gATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGtt                                                  <  2:452747/149‑1 (MQ=255)                                                                                     gATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGtt                                                  >  2:520365/1‑149 (MQ=255)                                                                                           tatTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGTTTGAGTTAGCGGTAACTTGACCTGCCGATAAATCGACTGCATTATCAATTAGttgagtgc                                            >  1:396048/1‑143 (MQ=255)                                                                                             ttccgggTGTACATACCGGGTAAATATTTTATGAAAGGCGGCAATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGGAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGATATCGACTGCATTATCAATTTGTTCCATCCAg                                          <  2:121828/144‑1 (MQ=255)                                                                                             ttCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAg                                          <  1:520365/149‑1 (MQ=255)                                                                                                           aCCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAg                            <  1:148659/149‑1 (MQ=255)                                                                                                              tGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGt                         >  2:441386/1‑149 (MQ=255)                                                                                                                   aaTAGTTGATGAAAGGCGACGATGAGGCCGAAAAAATAATACTTATTTATAATCCACCACGTAAGTCGCGTTAGCAGTGACTTCACCTGGCGTGACAACCACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGtt                    <  2:373512/149‑1 (MQ=255)                                                                                                                    atatTGTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTc                   <  2:107840/149‑1 (MQ=255)                                                                                                                     tatTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTCt                  >  1:17846/1‑149 (MQ=255)                                                                                                                       ttttATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTCtga                >  2:556448/1‑149 (MQ=255)                                                                                                                                     gcgATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTCTGATGAGCTTGCATCCa  >  1:119797/1‑149 (MQ=255)                                                                                                                                      |                                                                                                                                                    TTGATTTATCGAGAACATTCAGATTGAATTCGACCGCCATTGCGCAAGGCATCGCCATGACCAGGCAGGATACAAAAGAGAGTCGATAAATATTCACGGTGTCCATACCTGATAAATATTTTATGAAAGGCGGCGATGATGCCGCCAAAATAATACTTATTTATAATCCAGCACGTAGGTTGCGTTAGCGGTTACTTCACCTGCCGTGACATCGACTGCATTATCAATTTGTTCCATCCAGGCGAAAAAGTTCAGCGTCTGTTCTGATGAGCTTGCATCCA  >  NC_000913_3_hsa_tpiA/752073‑752353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.