New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 20668328 (0.230)6 (0.180) 6/262 3.4 61.6% coding (490/1017 nt) insH1 IS5 transposase and trans‑activator
?NC_000913_3_hsa_tpiA = 2066857 0 (0.000)coding (465/1017 nt) insH1 IS5 transposase and trans‑activator
Rejected: Coverage evenness skew score above cutoff.

CTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAG  >  NC_000913_3_hsa_tpiA/2066686‑2066866
                                                                                                                                                  |                                  
cTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCACTTCGCATCGACACCAATGTGAGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGc                                  >  1:305298/1‑149 (MQ=255)
   gTTGGCCGTGGTGGTGACTAGGCTGTGCGTCCGTCCGATCTGGGCTGCGAGGTGAACGTGGGGCTTCATGCCAAAGTGCCACTGATTGGCTTTCTTGGTCTGATGCAGCTCCGGAGCGTGGTGTTGCTCTCTGTTCTTGGTCGAGCTgg                               <  2:508641/149‑1 (MQ=2)
                  gACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAtgg                >  1:575570/1‑149 (MQ=35)
                   aCTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAtggt               >  2:53566/1‑149 (MQ=35)
                     tAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAtggtgg             >  1:278050/1‑149 (MQ=33)
                         cTGTTGGTCAGGCCGCTTTGGGCATCGGCACCAATGTGGGCCGTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGAtggtgaacgc         <  2:77660/149‑6 (MQ=11)
                               gTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCaa   <  1:368285/149‑1 (MQ=32)
                                tCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAg  <  1:78300/149‑1 (MQ=32)
                                                                                                                                                  |                                  
CTCGTTGGCCGCGGTGGTGACTAGGCTGTGGGTCAGGCCGCTCTTGGCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAG  >  NC_000913_3_hsa_tpiA/2066686‑2066866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.